POGZ (pogo transposable element derived with ZNF domain) - Rat Genome Database

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Gene: POGZ (pogo transposable element derived with ZNF domain) Canis lupus familiaris
Analyze
Symbol: POGZ
Name: pogo transposable element derived with ZNF domain
RGD ID: 12193109
Description: ENCODES a protein that exhibits nucleic acid binding (inferred); zinc ion binding (inferred); INVOLVED IN double-strand break repair via homologous recombination (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Developmental Disabilities (ortholog); Dravet syndrome (ortholog); FOUND IN chromatin (inferred); ciliary basal body (inferred); cytoplasm (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: pogo transposable element with ZNF domain
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11760,464,609 - 60,511,735 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1760,465,230 - 60,511,934 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1759,909,098 - 59,954,694 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01761,482,101 - 61,528,240 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1761,480,642 - 61,528,466 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11760,309,922 - 60,355,542 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01760,395,876 - 60,441,670 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01761,124,503 - 61,170,655 (-)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
POGZ
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11760,464,609 - 60,511,735 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1760,465,230 - 60,511,934 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1759,909,098 - 59,954,694 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01761,482,101 - 61,528,240 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1761,480,642 - 61,528,466 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11760,309,922 - 60,355,542 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01760,395,876 - 60,441,670 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01761,124,503 - 61,170,655 (-)NCBIUU_Cfam_GSD_1.0
POGZ
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381151,402,724 - 151,459,494 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1151,402,724 - 151,459,494 (-)EnsemblGRCh38hg38GRCh38
GRCh371151,375,200 - 151,431,970 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361149,641,824 - 149,698,556 (-)NCBINCBI36Build 36hg18NCBI36
Build 341148,188,272 - 148,245,005NCBI
Celera1124,490,466 - 124,547,192 (-)NCBICelera
Cytogenetic Map1q21.3NCBI
HuRef1122,753,210 - 122,809,847 (-)NCBIHuRef
CHM1_11152,770,790 - 152,827,420 (-)NCBICHM1_1
T2T-CHM13v2.01150,526,433 - 150,583,190 (-)NCBIT2T-CHM13v2.0
Pogz
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39394,730,289 - 94,790,888 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl394,744,878 - 94,789,637 (+)EnsemblGRCm39 Ensembl
GRCm38394,822,989 - 94,883,577 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl394,837,567 - 94,882,326 (+)EnsemblGRCm38mm10GRCm38
MGSCv37394,641,489 - 94,687,491 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36394,923,117 - 94,966,213 (+)NCBIMGSCv36mm8
Celera396,268,238 - 96,314,269 (+)NCBICelera
Cytogenetic Map3F2.1NCBI
cM Map340.74NCBI
Pogz
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82185,069,492 - 185,129,741 (+)NCBIGRCr8
mRatBN7.22182,394,269 - 182,440,711 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2182,380,768 - 182,440,707 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx2190,077,496 - 190,105,366 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02187,872,867 - 187,900,748 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02182,709,966 - 182,737,835 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.02195,995,322 - 196,041,500 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2195,996,521 - 196,041,497 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02215,507,126 - 215,534,827 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42189,748,657 - 189,776,355 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.12189,685,298 - 189,728,992 (+)NCBI
Celera2174,957,108 - 174,984,012 (+)NCBICelera
Cytogenetic Map2q34NCBI
Pogz
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955589920,508 - 976,366 (+)EnsemblChiLan1.0
ChiLan1.0NW_004955589920,729 - 975,242 (+)NCBIChiLan1.0ChiLan1.0
POGZ
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2198,351,060 - 98,420,975 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1198,102,244 - 98,172,148 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01126,761,777 - 126,818,262 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11130,407,426 - 130,463,909 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1130,407,426 - 130,463,909 (-)Ensemblpanpan1.1panPan2
Pogz
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505822,583,808 - 22,620,357 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365801,615,713 - 1,650,874 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365801,613,425 - 1,650,849 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
POGZ
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl497,776,589 - 97,833,282 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1497,776,579 - 97,833,287 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.24106,997,208 - 107,034,066 (+)NCBISscrofa10.2Sscrofa10.2susScr3
POGZ
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12012,236,036 - 12,290,937 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2012,236,145 - 12,290,956 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603811,809,947 - 11,865,321 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Pogz
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462477219,127,702 - 19,184,048 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462477219,127,702 - 19,184,151 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in POGZ
437 total Variants

Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
reproductive system
respiratory system
6 5 5 23 22 16 6 6 6 6 33 22 12 14 10

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_003639637 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_003639638 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005630808 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005630809 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038423188 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038423189 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038423190 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038423191 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038423192 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038453492 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038499677 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038499678 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038499679 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038499680 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038499681 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038562245 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038562246 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038562247 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038562248 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038562249 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038626341 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038626342 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038626343 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038626344 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038626345 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000017 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000209 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000035 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000359 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000017 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSCAFT00000020169   ⟹   ENSCAFP00000018707
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1760,465,230 - 60,511,934 (-)Ensembl
Ensembl Acc Id: ENSCAFT00000046033   ⟹   ENSCAFP00000043151
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1760,465,230 - 60,511,934 (-)Ensembl
Ensembl Acc Id: ENSCAFT00845041373   ⟹   ENSCAFP00845032439
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1761,480,642 - 61,528,466 (-)Ensembl
Ensembl Acc Id: ENSCAFT00845041538   ⟹   ENSCAFP00845032565
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1761,480,642 - 61,528,466 (-)Ensembl
Ensembl Acc Id: ENSCAFT00845041687   ⟹   ENSCAFP00845032693
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1761,480,642 - 61,528,380 (-)Ensembl
RefSeq Acc Id: XM_003639637   ⟹   XP_003639685
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11760,464,609 - 60,511,735 (-)NCBI
Dog10K_Boxer_Tasha1759,909,098 - 59,954,694 (-)NCBI
Sequence:
RefSeq Acc Id: XM_003639638   ⟹   XP_003639686
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11760,464,609 - 60,511,735 (-)NCBI
Dog10K_Boxer_Tasha1759,909,098 - 59,954,692 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005630808   ⟹   XP_005630865
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11760,464,609 - 60,511,735 (-)NCBI
Dog10K_Boxer_Tasha1759,909,098 - 59,954,693 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005630809   ⟹   XP_005630866
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11760,464,609 - 60,511,734 (-)NCBI
Dog10K_Boxer_Tasha1759,909,098 - 59,954,692 (-)NCBI
Sequence:
RefSeq Acc Id: XM_038423188   ⟹   XP_038279116
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01761,482,101 - 61,528,239 (-)NCBI
RefSeq Acc Id: XM_038423189   ⟹   XP_038279117
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01761,482,101 - 61,528,239 (-)NCBI
RefSeq Acc Id: XM_038423190   ⟹   XP_038279118
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01761,482,101 - 61,528,240 (-)NCBI
RefSeq Acc Id: XM_038423191   ⟹   XP_038279119
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01761,482,101 - 61,528,238 (-)NCBI
RefSeq Acc Id: XM_038423192   ⟹   XP_038279120
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01761,482,101 - 61,528,238 (-)NCBI
RefSeq Acc Id: XM_038453492   ⟹   XP_038309420
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1759,909,098 - 59,954,694 (-)NCBI
RefSeq Acc Id: XM_038499677   ⟹   XP_038355605
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11760,309,922 - 60,355,541 (-)NCBI
RefSeq Acc Id: XM_038499678   ⟹   XP_038355606
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11760,309,922 - 60,355,542 (-)NCBI
RefSeq Acc Id: XM_038499679   ⟹   XP_038355607
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11760,309,922 - 60,355,542 (-)NCBI
RefSeq Acc Id: XM_038499680   ⟹   XP_038355608
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11760,309,922 - 60,355,540 (-)NCBI
RefSeq Acc Id: XM_038499681   ⟹   XP_038355609
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11760,309,922 - 60,355,540 (-)NCBI
RefSeq Acc Id: XM_038562245   ⟹   XP_038418173
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01761,124,503 - 61,170,654 (-)NCBI
RefSeq Acc Id: XM_038562246   ⟹   XP_038418174
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01761,124,503 - 61,170,655 (-)NCBI
RefSeq Acc Id: XM_038562247   ⟹   XP_038418175
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01761,124,503 - 61,170,655 (-)NCBI
RefSeq Acc Id: XM_038562248   ⟹   XP_038418176
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01761,124,503 - 61,170,653 (-)NCBI
RefSeq Acc Id: XM_038562249   ⟹   XP_038418177
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01761,124,503 - 61,170,653 (-)NCBI
RefSeq Acc Id: XM_038626341   ⟹   XP_038482269
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01760,395,876 - 60,441,669 (-)NCBI
RefSeq Acc Id: XM_038626342   ⟹   XP_038482270
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01760,395,876 - 60,441,669 (-)NCBI
RefSeq Acc Id: XM_038626343   ⟹   XP_038482271
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01760,395,876 - 60,441,670 (-)NCBI
RefSeq Acc Id: XM_038626344   ⟹   XP_038482272
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01760,395,876 - 60,441,669 (-)NCBI
RefSeq Acc Id: XM_038626345   ⟹   XP_038482273
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01760,395,876 - 60,441,669 (-)NCBI
Protein Sequences
Protein RefSeqs XP_003639685 (Get FASTA)   NCBI Sequence Viewer  
  XP_003639686 (Get FASTA)   NCBI Sequence Viewer  
  XP_005630865 (Get FASTA)   NCBI Sequence Viewer  
  XP_005630866 (Get FASTA)   NCBI Sequence Viewer  
  XP_038279116 (Get FASTA)   NCBI Sequence Viewer  
  XP_038279117 (Get FASTA)   NCBI Sequence Viewer  
  XP_038279118 (Get FASTA)   NCBI Sequence Viewer  
  XP_038279119 (Get FASTA)   NCBI Sequence Viewer  
  XP_038279120 (Get FASTA)   NCBI Sequence Viewer  
  XP_038309420 (Get FASTA)   NCBI Sequence Viewer  
  XP_038355605 (Get FASTA)   NCBI Sequence Viewer  
  XP_038355606 (Get FASTA)   NCBI Sequence Viewer  
  XP_038355607 (Get FASTA)   NCBI Sequence Viewer  
  XP_038355608 (Get FASTA)   NCBI Sequence Viewer  
  XP_038355609 (Get FASTA)   NCBI Sequence Viewer  
  XP_038418173 (Get FASTA)   NCBI Sequence Viewer  
  XP_038418174 (Get FASTA)   NCBI Sequence Viewer  
  XP_038418175 (Get FASTA)   NCBI Sequence Viewer  
  XP_038418176 (Get FASTA)   NCBI Sequence Viewer  
  XP_038418177 (Get FASTA)   NCBI Sequence Viewer  
  XP_038482269 (Get FASTA)   NCBI Sequence Viewer  
  XP_038482270 (Get FASTA)   NCBI Sequence Viewer  
  XP_038482271 (Get FASTA)   NCBI Sequence Viewer  
  XP_038482272 (Get FASTA)   NCBI Sequence Viewer  
  XP_038482273 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00000018707.4
  ENSCAFP00000043151.3
  ENSCAFP00040022203.1
  ENSCAFP00040022348.1
  ENSCAFP00845032439
  ENSCAFP00845032439.1
  ENSCAFP00845032565
  ENSCAFP00845032565.1
  ENSCAFP00845032693.1
RefSeq Acc Id: XP_003639685   ⟸   XM_003639637
- Peptide Label: isoform X2
- UniProtKB: A0A8C0KJY5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005630865   ⟸   XM_005630808
- Peptide Label: isoform X1
- UniProtKB: A0A8P0SWF3 (UniProtKB/TrEMBL),   A0A8C0KJY5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_003639686   ⟸   XM_003639638
- Peptide Label: isoform X4
- UniProtKB: A0A8C0KI54 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005630866   ⟸   XM_005630809
- Peptide Label: isoform X3
- UniProtKB: A0A8C0KI54 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSCAFP00000018707   ⟸   ENSCAFT00000020169
Ensembl Acc Id: ENSCAFP00000043151   ⟸   ENSCAFT00000046033
RefSeq Acc Id: XP_038355607   ⟸   XM_038499679
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038355606   ⟸   XM_038499678
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038355605   ⟸   XM_038499677
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038355609   ⟸   XM_038499681
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038355608   ⟸   XM_038499680
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038482271   ⟸   XM_038626343
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038482273   ⟸   XM_038626345
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038482272   ⟸   XM_038626344
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038482269   ⟸   XM_038626341
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038482270   ⟸   XM_038626342
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038279118   ⟸   XM_038423190
- Peptide Label: isoform X2
- UniProtKB: A0A8C0KJY5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038279116   ⟸   XM_038423188
- Peptide Label: isoform X1
- UniProtKB: A0A8C0KJY5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038279117   ⟸   XM_038423189
- Peptide Label: isoform X1
- UniProtKB: A0A8C0KJY5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038279120   ⟸   XM_038423192
- Peptide Label: isoform X4
- UniProtKB: A0A8C0KI54 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038279119   ⟸   XM_038423191
- Peptide Label: isoform X3
- UniProtKB: A0A8C0KI54 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038309420   ⟸   XM_038453492
- Peptide Label: isoform X1
- UniProtKB: A0A8P0SWF3 (UniProtKB/TrEMBL),   A0A8C0KJY5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038418175   ⟸   XM_038562247
- Peptide Label: isoform X2
- UniProtKB: A0A8C0KJY5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038418174   ⟸   XM_038562246
- Peptide Label: isoform X1
- UniProtKB: A0A8C0KJY5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038418173   ⟸   XM_038562245
- Peptide Label: isoform X1
- UniProtKB: A0A8C0KJY5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038418177   ⟸   XM_038562249
- Peptide Label: isoform X4
- UniProtKB: A0A8C0KI54 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038418176   ⟸   XM_038562248
- Peptide Label: isoform X3
- UniProtKB: A0A8C0KI54 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSCAFP00845032439   ⟸   ENSCAFT00845041373
Ensembl Acc Id: ENSCAFP00845032693   ⟸   ENSCAFT00845041687
Ensembl Acc Id: ENSCAFP00845032565   ⟸   ENSCAFT00845041538
Protein Domains
C2H2-type   HTH CENPB-type


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000012719 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00040013826 UniProtKB/TrEMBL
  ENSCAFG00845023413 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000020169.6 UniProtKB/TrEMBL
  ENSCAFT00000046033.4 UniProtKB/TrEMBL
  ENSCAFT00040025535.1 UniProtKB/TrEMBL
  ENSCAFT00040025699.1 UniProtKB/TrEMBL
  ENSCAFT00845041373 ENTREZGENE
  ENSCAFT00845041373.1 UniProtKB/TrEMBL
  ENSCAFT00845041538 ENTREZGENE
  ENSCAFT00845041538.1 UniProtKB/TrEMBL
  ENSCAFT00845041687.1 UniProtKB/TrEMBL
Gene3D-CATH Classic Zinc Finger UniProtKB/TrEMBL
  Homeodomain-like UniProtKB/TrEMBL
InterPro DDE_SF_endonuclease_dom UniProtKB/TrEMBL
  Homeobox-like_sf UniProtKB/TrEMBL
  HTH_CenpB_DNA-bd_dom UniProtKB/TrEMBL
  Zinc_finger/UBP_domain UniProtKB/TrEMBL
  Znf_C2H2_sf UniProtKB/TrEMBL
  Znf_C2H2_type UniProtKB/TrEMBL
NCBI Gene POGZ ENTREZGENE
PANTHER POGO TRANSPOSABLE ELEMENT WITH ZNF DOMAIN UniProtKB/TrEMBL
  ZINC FINGER PROTEIN UniProtKB/TrEMBL
Pfam DDE_1 UniProtKB/TrEMBL
  HTH_Tnp_Tc5 UniProtKB/TrEMBL
PROSITE HTH_CENPB UniProtKB/TrEMBL
  ZINC_FINGER_C2H2_1 UniProtKB/TrEMBL
  ZINC_FINGER_C2H2_2 UniProtKB/TrEMBL
SMART CENPB UniProtKB/TrEMBL
  ZnF_C2H2 UniProtKB/TrEMBL
Superfamily-SCOP SSF46689 UniProtKB/TrEMBL
  SSF57667 UniProtKB/TrEMBL
UniProt A0A8C0KI54 ENTREZGENE
  A0A8C0KJY5 ENTREZGENE
  A0A8C0SJL4_CANLF UniProtKB/TrEMBL
  A0A8C0SLV4_CANLF UniProtKB/TrEMBL
  A0A8I3PEN1_CANLF UniProtKB/TrEMBL
  A0A8I3PFE7_CANLF UniProtKB/TrEMBL
  A0A8I3PNF6_CANLF UniProtKB/TrEMBL
  A0A8P0SWF3 ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary A0A8P0SHB5 UniProtKB/TrEMBL
VGNC ID VGNC:44770 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2017-04-04 POGZ  pogo transposable element derived with ZNF domain    pogo transposable element with ZNF domain  Symbol and/or name change 5135510 APPROVED