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Gene: RAB31 (RAB31, member RAS oncogene family) Canis lupus familiaris

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Symbol:

RAB31

Name:

RAB31, member RAS oncogene family

RGD ID:

12190768

Description:

ENCODES a protein that exhibits GDP binding (inferred); GTP binding (inferred); GTPase activity (inferred); INVOLVED IN Golgi vesicle transport (ortholog); ASSOCIATED WITH chromosome 18p deletion syndrome (ortholog); dystonia (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN late endosome (ortholog); trans-Golgi network (ortholog); INTERACTS WITH mocetinostat

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

ras-related protein Rab-31

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	7	75,678,896 - 75,807,716 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	7	75,678,908 - 75,817,426 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	7	75,076,498 - 75,205,288 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	7	75,739,452 - 75,868,183 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	7	75,739,099 - 75,868,181 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	7	75,437,794 - 75,566,545 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	7	75,455,552 - 75,584,138 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	7	75,764,955 - 75,893,623 (+)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

chromosome 18p deletion syndrome (ISO)

dystonia (ISO)

Experimental Liver Cirrhosis (ISO)

intellectual disability (ISO)

severe acute respiratory syndrome (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

mocetinostat (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cellular response to insulin stimulus (IEA)

Golgi to plasma membrane protein transport (IEA)

Golgi vesicle transport (ISO)

phagosome maturation (IEA)

positive regulation of phagocytosis, engulfment (IEA)

receptor internalization (IEA)

regulated exocytosis (IEA)

Cellular Component

cytoplasm (IEA)

early endosome (IEA)

early phagosome membrane (IEA)

endosome (IEA)

late endosome (ISO)

phagocytic cup (IEA)

phagocytic vesicle (IEA)

phagocytic vesicle membrane (IEA)

trans-Golgi network (ISO)

trans-Golgi network membrane (IEA)

Molecular Function

GDP binding (IEA)

GTP binding (IEA)

GTPase activity (IEA)

protein binding (ISO)

References

Additional References at PubMed

PMID:22301074

Genomics

Comparative Map Data

RAB31
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	7	75,678,896 - 75,807,716 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	7	75,678,908 - 75,817,426 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	7	75,076,498 - 75,205,288 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	7	75,739,452 - 75,868,183 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	7	75,739,099 - 75,868,181 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	7	75,437,794 - 75,566,545 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	7	75,455,552 - 75,584,138 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	7	75,764,955 - 75,893,623 (+)	NCBI		UU_Cfam_GSD_1.0

RAB31
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	18	9,708,301 - 9,862,551 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	18	9,708,275 - 9,862,551 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	18	9,708,298 - 9,862,548 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	18	9,765,274 - 9,852,548 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	18	9,698,302 - 9,852,547	NCBI
Celera	18	9,592,158 - 9,746,168 (+)	NCBI		Celera
Cytogenetic Map	18	p11.22	NCBI
HuRef	18	9,670,154 - 9,824,845 (+)	NCBI		HuRef
CHM1_1	18	9,707,467 - 9,861,823 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	18	9,871,688 - 10,026,019 (+)	NCBI		T2T-CHM13v2.0

Rab31
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	17	65,958,721 - 66,079,747 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	17	65,958,724 - 66,079,747 (-)	Ensembl		GRCm39 Ensembl
GRCm38	17	65,651,726 - 65,772,752 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	17	65,651,729 - 65,772,752 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	17	66,001,066 - 66,122,092 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	17	65,551,272 - 65,672,224 (-)	NCBI		MGSCv36	mm8
Celera	17	69,955,123 - 70,076,119 (-)	NCBI		Celera
Cytogenetic Map	17	E1.1	NCBI
cM Map	17	35.03	NCBI

Rab31
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	9	112,693,596 - 112,828,104 (-)	NCBI		GRCr8
mRatBN7.2	9	105,246,712 - 105,382,973 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	9	105,246,709 - 105,381,253 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	9	113,655,680 - 113,787,479 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	9	118,767,100 - 118,894,913 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	9	117,121,634 - 117,253,437 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	9	113,370,072 - 113,504,606 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	9	113,370,033 - 113,504,605 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	9	112,902,312 - 113,037,023 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	9	104,408,546 - 104,543,084 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	9	104,620,581 - 104,752,513 (-)	NCBI
Celera	9	102,633,277 - 102,759,642 (-)	NCBI		Celera
Cytogenetic Map	9	q37	NCBI

Rab31
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955402	2,354,646 - 2,446,453 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955402	2,354,399 - 2,446,537 (-)	NCBI	ChiLan1.0	ChiLan1.0

RAB31
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	17	28,588,767 - 28,742,636 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	18	14,281,361 - 14,435,218 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	18	4,424,677 - 4,578,263 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	18	6,706,960 - 6,793,147 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	18	6,710,174 - 6,859,896 (-)	Ensembl	panpan1.1		panPan2

Rab31
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404944	2,398,635 - 2,476,693 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936626	1,628,451 - 1,660,510 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936626	1,628,379 - 1,673,150 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

RAB31
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	98,278,647 - 98,385,795 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	6	98,278,644 - 98,385,857 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	6	91,609,428 - 91,647,200 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

RAB31
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	18	68,583,178 - 68,736,182 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	18	68,583,259 - 68,736,771 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666050	43,536,070 - 43,688,505 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Rab31
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624770	18,285,132 - 18,372,650 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624770	18,285,140 - 18,372,389 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in RAB31
1705 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

adipose tissue	alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	reproductive system	respiratory system
6	5	5	23	22	16	6	6	6	6	33	22	12	14	10

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_022421633	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038482409	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038482410	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038543866	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038543867	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038578062	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038607977	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038607978	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038672669	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038672670	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_845517	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_002628777	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000007	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000084	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000093	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000022	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000007	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCAFT00000029725 ⟹ ENSCAFP00000027625

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	7	75,678,977 - 75,804,523 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00000082009 ⟹ ENSCAFP00000049796

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	7	75,678,908 - 75,817,426 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00000090930 ⟹ ENSCAFP00000064367

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	7	75,680,571 - 75,804,523 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00000091870 ⟹ ENSCAFP00000056089

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	7	75,678,908 - 75,796,330 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00845008340 ⟹ ENSCAFP00845006561

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	7	75,739,099 - 75,865,594 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00845008345 ⟹ ENSCAFP00845006565

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	7	75,739,099 - 75,856,834 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00845008351 ⟹ ENSCAFP00845006571

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	7	75,739,473 - 75,868,181 (+)	Ensembl

RefSeq Acc Id:

XM_038482409 ⟹ XP_038338337

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	7	75,437,794 - 75,566,545 (+)	NCBI

RefSeq Acc Id:

XM_038482410 ⟹ XP_038338338

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	7	75,437,794 - 75,556,070 (+)	NCBI

RefSeq Acc Id:

XM_038543866 ⟹ XP_038399794

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	7	75,764,957 - 75,893,623 (+)	NCBI

RefSeq Acc Id:

XM_038543867 ⟹ XP_038399795

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	7	75,764,955 - 75,883,163 (+)	NCBI

RefSeq Acc Id:

XM_038578062 ⟹ XP_038433990

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	7	75,076,498 - 75,193,883 (+)	NCBI

RefSeq Acc Id:

XM_038607977 ⟹ XP_038463905

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	7	75,455,552 - 75,584,138 (+)	NCBI

RefSeq Acc Id:

XM_038607978 ⟹ XP_038463906

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	7	75,455,552 - 75,573,684 (+)	NCBI

RefSeq Acc Id:

XM_038672669 ⟹ XP_038528597

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	7	75,739,454 - 75,868,183 (+)	NCBI

RefSeq Acc Id:

XM_038672670 ⟹ XP_038528598

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	7	75,739,452 - 75,856,798 (+)	NCBI

RefSeq Acc Id:

XM_845517 ⟹ XP_850610

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	7	75,678,902 - 75,807,716 (+)	NCBI
Dog10K_Boxer_Tasha	7	75,076,500 - 75,205,288 (+)	NCBI

Sequence:

show sequence

GCCGCTGCGAGGGGAAGGCGGAGACTCAAGGCCGCGGCTGGGCGCGGGCGGGCGCGGCGCGGCC
CCGGCCCCGGAGGATGCTGAGCCCCTGCCCGCTCCGGCCTCGAGCACATGATGGCGATACGGGA
GCTCAAAGTGTGTCTTCTCGGGGACACCGGGGTTGGGAAATCAAGCATTGTGTGTCGATTTGTC
CAGGATCACTTTGACCACAACATCAGCCCGACCATTGGGGCATCTTTTATGACCAAAACTGTGC
CTTGTGGAAATGAACTTCATAAGTTCCTCATCTGGGACACTGCTGGGCAGGAACGGTTTCATTC
ACTGGCTCCCATGTACTACCGTGGATCTGCTGCAGCTGTCATAGTATATGATATTACCAAACAG
GATTCATTTCATACCCTGAAGAAATGGGTGAAAGAACTGAAGGAGCACGGTCCAGAAAACATTG
TAATGGCTATTGCTGGAAACAAGTGTGATCTCTCAGATATTAGGGAAGTTCCCTTGAAGGATGC
TAAGGAATATGCTGAATCCATAGGTGCTGTTGTGGTTGAAACAAGTGCAAAAAATGCTATTAAT
ATCGAAGAGCTCTTTCAAGGAATCAGTCGCCAGATCCCACCTTTGGACCCCCACGAAAATGGAA
ACAATGGAGCAATCAAACTGGGGAAGCCACCCACGCCAGCCAGCCGGCGGTGCTGCTGACCTGT
GGCCCAGGGTCCACTGAACCTGAAGAAGCCAGAGCCGACCTCCTATTCTCAGCAGCCTGGCCCC
CAGCGTGGGGAGAAGTGAGACGCTGGCTTGGCTTCCTGGAAGACCTGCAGCGACGGGGCAGGAA
CTGTCCCTGGAAAAAACTCCAGAAAAATCTGCCATGCTGCCACCAAATGGCCTTTGGGGCGTGA
AATGCACGTGGGAGGGAACATGTTAGGTAATAAGTATAGTTGAGTCTTTTGTTGTTGTTGTTAA
AAATCCGAAAATATTCTTATATTTGTACAGCGGTCTCACTGGCTTATCTGTGTGTGTGAGATTC
TAAAGTGGCATTCCACTCTGATTTCCTGCGTTCCCAGCCCAATTTCAGCAAGTGCTCCAATGCC
ACTGCCTCTGTTACCTGACCAGCCTTCACTGAAAGGTTCATTTAATTTAACTTAATTTACCTTT
CAGCGGAGCGTAATTGGATCATCACTCAAGCTAGAGACTTGAGCCATCGTGAAAGTGGAGAAAG
ATGTATTAGAAACTGTTTTCTACATCTCTGACTTTTACTTTATGCCTGTCTTTCTAAGTTTTAG
TTACACATAAACAAGCAAACCAAATCTGACTAAAATATTTCATGCAGCTTTGGGGTTGGGAGGC
CTAGTTTGAAGGAGTCATTTAAGTACTGTGTAAATGGTGACAGATGTAGGATATAAATATTTTT
CCAGAGACTGCCTGGTATGCATCATCTCCACAGTAATAAATTCCTCCTCTCTTACAGAGGGTTA
ATTCACAGAGTAGGATTTTACTAAGACAGTATGTCACGGTGTCATATCCAGGGGGAAAATTAAC
CAGAGGATGTTTGAGTCTAAATCATAGGGCAAACTTCTAATAACATCAATCGATAGGTTATGGG
AAAGCCAGCCAAAGGAAGCACCAGCACCCTAAGATGCAAGACCCCAAAATTACAAGATTGGAGA
AAGTGTTGGGTAGGTGGGCATTGTAACTCACCAGAGGTCCAACCCTGGAAATGCCAGTTAGCTG
AGAGTAGGCTTTCACAAAACCTTCCCTTCTAGATTCCCTGTCTGCTCAATTAATTAAAGATGTC
TGAATCCAATGGAAAGAAAAGGAAGGGAGGCATGGAAAGGAAAAAGAGCTATTTCCATTGGAAA
TCCAGATCTTACCATTCTAACTTCCATAAATACCTGAGATCAAGAAGCAGTTGGTTTCCTCTTA
GGGCTTATATTGGGAAGAAATTCTTAAAGGCTGTTTGGATCTGTGCCTTTGGTGGGGACTCAGA
AACCATAAAGAATGGCCGGCTTCAGGAATGGTTAATCAGGCAGCATGGCAACAGGGCCAGCCGG
TACCTTTTTTGCTAATTCAAGGCCCAGCAAACATTAATAGAAAACCTATAACATAAAAGCCAAG
AAAGAGATTGTGAGCTGACGAAAGACCTCAAACCTCCAGTGACTCCGTGTGAGCTGGTACTTCA
GAGGCCTGTCATGGCTGTGCCCACCCTACTCTTGATGGAGACACTGAAATCGCCATCAACAAAG
AACAAGTCTCCTTGGGAGAGTCACAGCCAAGTTTACACCAATTTATGTGGACTGCAATCAAGAA
AACAGGTGGAAATCACAGATTTAGGTTTTTTTTTTTTTCTAGAAAAACCCAAGAATATGCTGTC
AATTGGATATTGCAACTGCTTCACTCAGCTTGCAAGAATAGCTTGACAATCTTAGGATGTGCAG
GCTAGAAATACTTATTTTTGGTTCAAGAGTGCTTCTTAGCTCTCTGAGACAGGCGCTCAAAAAC
TGCTAGTAAGTGGCATTTAGATGTCTTGGCGGGGCCTTTGCTGGGCTTTTTAGGATTTTCTCCA
CGTTGTCAACTTTACTAGCAGCCAGCATGATTCTGCTTGCGGGCCAAGTGATTATCATGCTTCT
TTCAAAAGTTAGAAAATTGAGGTTGCTATTTGAATGACCTCTTTCCCGGGGACATGCAGGCTTG
TTGTAAAACCTCTCCTCATCCAGCTGTCCCCAAGAACCTGAGTCTCTCTCTAAACAGCTGCTCA
AGTTGTCTAGCTCAGGCTGTCCACGTCCCAGAGAGGTTCACAGTCTTTGCCTGGGTCTTTAGTG
GTTGCATCTTGCATGAAAGAGCTAATGTTAATCATATGTAGAGAGCAACCCATCAATGAGCCCA
TGGTCTTATTTCAGAAGCACATTGAGGGTGAGAACCACTCTTTTACCTTTCCATACTGCCTTAA
CTCTTCCAGCCAGTCAGATGACAATATATATTTATATATAATCACTACTCAGAGCAGTTGGTGA
AGAGTACACAGCCCTTGGGCACACATCATTCGTATAAACATGGAGGCTCCTCTGAAGATAGATC
CTCGAGCCTTGTCCACAGTGAAGCTCTCTAATTTCCTTTGTTTTGCTTTGCAATTACTTTCTGG
CTGTTCTGATCATTGAACTATAAGCACGTAATATCATGGAAAGGCCTGGAAATTACGATTGCTC
CAAAATGTCAAGTGGTTTCTTGGGATGTAAATCCTTCCCATAATTTCCCAAACTTTCCCTTTTC
CCCCTCTGTTTTCTTTCCTTTCACGTGCATGTATATGTGTAAATATAATTTGTATGTGTGACAC
CGACATGTGACCCATTTCACTGGCTGAGTCTGGCTCGTGCCTGTGTGTTGCACAGTGTAAGGCC
TGGATTCTCATAGGGCTTGTTTCCCCGTGGGAATCCCTGAGGTGGTGCTGGAGCCATGCGCACA
TTTTAGGGAGGTACATAATTGACTTGCCATTTTATACTTGAAATGGTACATCAGGGTACTTAGA
TGACGTTACCTTGCAGACTATAGAAGGTTAAAGACCTAAAACTAACTTTTGGCCAGCGGAAGGG
CTGGCCCCAATGAGAACTGAATTCATTTCCCGAGGGAGGTTTGGGTGACAGAGGTATTTCCTTT
GCGGGCAGGGAATATGCCGGACGATGGCTGAAGCTGAGCTCTTCCTAGGGGACCCCACTCCGTG
CAGTGCTCGCAGCCAGTTGAATTACAAGCCAGTTTATCAACCAAAGGGCTCGGAGCTATATTCA
GATCCATTGGGCATCTAGTCTACTTTTTCAGCCACCATTGTTGAAAGCAGACCCAGTGATCCAG
TGTCAGTGCTCTATTGTGTAAACCATTCCTTTTTCTCATGTTTCTATAAAGGGCTTGTGTCTGG
GCTGGACCCAGTTCTCACTTATAGAAGACGCTGCTGCAGACAGTTAGGACCTTTCCATCTTGTA
TTCGCTAGTAAGGCACCGCCCTCAACATCACTCAATTGTATGTTATTTTGGGTTTAACACACAC
TGATTCATACTAATAAATATTGTAAATTTTA

hide sequence

Protein Sequences


Protein RefSeqs	XP_038338337	(Get FASTA)	NCBI Sequence Viewer
	XP_038338338	(Get FASTA)	NCBI Sequence Viewer
	XP_038399794	(Get FASTA)	NCBI Sequence Viewer
	XP_038399795	(Get FASTA)	NCBI Sequence Viewer
	XP_038433990	(Get FASTA)	NCBI Sequence Viewer
	XP_038463905	(Get FASTA)	NCBI Sequence Viewer
	XP_038463906	(Get FASTA)	NCBI Sequence Viewer
	XP_038528597	(Get FASTA)	NCBI Sequence Viewer
	XP_038528598	(Get FASTA)	NCBI Sequence Viewer
	XP_850610	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000027625.4
	ENSCAFP00000056089.1
	ENSCAFP00000064367.2
	ENSCAFP00030008703.1
	ENSCAFP00030008740.1
	ENSCAFP00845006561.1
	ENSCAFP00845006565
	ENSCAFP00845006565.1
	ENSCAFP00845006571
	ENSCAFP00845006571.1

RefSeq Acc Id:	XP_850610 ⟸ XM_845517
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0MAA5 (UniProtKB/TrEMBL), A0A8I3MUD4 (UniProtKB/TrEMBL), A0A8I3MSY4 (UniProtKB/TrEMBL), A0A8P0SMF8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MMAIRELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAG QERFHSLAPMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDIRE VPLKDAKEYAESIGAVVVETSAKNAINIEELFQGISRQIPPLDPHENGNNGAIKLGKPPTPASR RCC hide sequence

Ensembl Acc Id:

ENSCAFP00000027625 ⟸ ENSCAFT00000029725

Ensembl Acc Id:

ENSCAFP00000056089 ⟸ ENSCAFT00000091870

Ensembl Acc Id:

ENSCAFP00000049796 ⟸ ENSCAFT00000082009

Ensembl Acc Id:

ENSCAFP00000064367 ⟸ ENSCAFT00000090930

RefSeq Acc Id:	XP_038338337 ⟸ XM_038482409
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038338338 ⟸ XM_038482410
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038463905 ⟸ XM_038607977
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038463906 ⟸ XM_038607978
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038528598 ⟸ XM_038672670
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0RDB6 (UniProtKB/TrEMBL), A0A8I3N9E1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038528597 ⟸ XM_038672669
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0MAA5 (UniProtKB/TrEMBL), A0A8I3MUD4 (UniProtKB/TrEMBL), A0A8I3MSY4 (UniProtKB/TrEMBL), A0A8P0SMF8 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038433990 ⟸ XM_038578062
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0RDB6 (UniProtKB/TrEMBL), A0A8I3N9E1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038399795 ⟸ XM_038543867
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0RDB6 (UniProtKB/TrEMBL), A0A8I3N9E1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038399794 ⟸ XM_038543866
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0MAA5 (UniProtKB/TrEMBL), A0A8I3MSY4 (UniProtKB/TrEMBL), A0A8I3MUD4 (UniProtKB/TrEMBL), A0A8P0SMF8 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSCAFP00845006561 ⟸ ENSCAFT00845008340

Ensembl Acc Id:

ENSCAFP00845006571 ⟸ ENSCAFT00845008351

Ensembl Acc Id:

ENSCAFP00845006565 ⟸ ENSCAFT00845008345

Promoters

RGD ID:

13684103

Promoter ID:

EPDNEW_C2172

Type:

initiation region

Name:

RAB31_1

Description:

RAB31, member RAS oncogene family

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	7	75,678,922 - 75,678,982	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000018727	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00030005431	UniProtKB/TrEMBL
	ENSCAFG00845004662	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000029725.5	UniProtKB/TrEMBL
	ENSCAFT00000090930.2	UniProtKB/TrEMBL
	ENSCAFT00000091870.2	UniProtKB/TrEMBL
	ENSCAFT00030009942.1	UniProtKB/TrEMBL
	ENSCAFT00030009986.1	UniProtKB/TrEMBL
	ENSCAFT00845008340.1	UniProtKB/TrEMBL
	ENSCAFT00845008345	ENTREZGENE
	ENSCAFT00845008345.1	UniProtKB/TrEMBL
	ENSCAFT00845008351	ENTREZGENE
	ENSCAFT00845008351.1	UniProtKB/TrEMBL
Gene3D-CATH	3.40.50.300	UniProtKB/TrEMBL
InterPro	P-loop_NTPase	UniProtKB/TrEMBL
	Rab	UniProtKB/TrEMBL
	Small_GTP-bd_dom	UniProtKB/TrEMBL
	Small_GTPase	UniProtKB/TrEMBL
NCBI Gene	RAB31	ENTREZGENE
PANTHER	RAS-RELATED PROTEIN RAB	UniProtKB/TrEMBL
	RAS-RELATED PROTEIN RAB-31 ISOFORM X1	UniProtKB/TrEMBL
Pfam	Ras	UniProtKB/TrEMBL
PRINTS	RASTRNSFRMNG	UniProtKB/TrEMBL
PROSITE	RAB	UniProtKB/TrEMBL
	RAS	UniProtKB/TrEMBL
SMART	RAB	UniProtKB/TrEMBL
	RAN	UniProtKB/TrEMBL
	RAS	UniProtKB/TrEMBL
	RHO	UniProtKB/TrEMBL
Superfamily-SCOP	SSF52540	UniProtKB/TrEMBL
UniProt	A0A8C0MAA5	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0RDB6	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3MSY4	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3MUD4	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3N9E1	ENTREZGENE, UniProtKB/TrEMBL
	A0A8P0PD16_CANLF	UniProtKB/TrEMBL
	A0A8P0SMF8	ENTREZGENE, UniProtKB/TrEMBL
VGNC ID	VGNC:45274	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - CTD

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD