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Gene: PSMD13 (proteasome 26S subunit, non-ATPase 13) Canis lupus familiaris

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Symbol:

PSMD13

Name:

proteasome 26S subunit, non-ATPase 13

RGD ID:

12186849

Description:

INVOLVED IN meiosis I (inferred); ASSOCIATED WITH Beckwith-Wiedemann syndrome (ortholog); human immunodeficiency virus infectious disease (ortholog); immunodeficiency 39 (ortholog); FOUND IN proteasome accessory complex (inferred); proteasome complex (inferred); proteasome regulatory particle (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

26S proteasome non-ATPase regulatory subunit 13; proteasome (prosome, macropain) 26S subunit, non-ATPase, 13

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	18	25,388,212 - 25,401,071 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	18	25,388,229 - 25,401,070 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	18	25,038,159 - 25,051,024 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	18	25,914,884 - 25,927,833 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	18	25,914,909 - 25,927,831 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	18	25,482,879 - 25,495,885 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	18	25,127,656 - 25,140,594 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	18	25,740,396 - 25,753,256 (+)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
PSMD13	Dog	Beckwith-Wiedemann syndrome		ISO	RGD:1313146	8554872	ClinVar Annotator: match by term: Beckwith-Wiedemann syndrome	ClinVar	PMID:21910219\|PMID:25427884\|PMID:28492532
PSMD13	Dog	immunodeficiency 39		ISO	RGD:1313146	8554872	ClinVar Annotator: match by term: Immunodeficiency 39	ClinVar	PMID:28492532

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
PSMD13	Dog	human immunodeficiency virus infectious disease		ISO	RGD:1313146	9068941	CTD Direct Evidence: marker/mechanism	CTD	PMID:15308739

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
PSMD13	Dog	meiosis I	acts_upstream_of_or_within	IEA	UniProtKB:Q9WVJ2\|ensembl:ENSMUSP00000026560	150520179		Ensembl	GO_REF:0000107
PSMD13	Dog	ubiquitin-dependent protein catabolic process	involved_in	IBA	PANTHER:PTN000056911\|SGD:S000002835	150520179		GO_Central	GO_REF:0000033

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
PSMD13	Dog	cytosol	is_active_in	IBA	PANTHER:PTN000056911\|SGD:S000002835	150520179		GO_Central	GO_REF:0000033
PSMD13	Dog	nucleus	is_active_in	IBA	PANTHER:PTN000056911\|SGD:S000002835	150520179		GO_Central	GO_REF:0000033
PSMD13	Dog	proteasome accessory complex	part_of	IEA	UniProtKB:Q9WVJ2\|ensembl:ENSMUSP00000026560	150520179		Ensembl	GO_REF:0000107
PSMD13	Dog	proteasome complex	part_of	IEA	UniProtKB:Q9UNM6\|ensembl:ENSP00000436186	150520179		Ensembl	GO_REF:0000107
PSMD13	Dog	proteasome complex	part_of	IEA	UniProtKB-KW:KW-0647	150520179		UniProt	GO_REF:0000043
PSMD13	Dog	proteasome complex	part_of	IEA	ARBA:ARBA00029017	150520179		UniProt	GO_REF:0000117
PSMD13	Dog	proteasome regulatory particle	part_of	IEA	UniProtKB:Q9WVJ2\|ensembl:ENSMUSP00000026560	150520179		Ensembl	GO_REF:0000107
PSMD13	Dog	proteasome regulatory particle, lid subcomplex	part_of	IBA	PANTHER:PTN000056911\|PomBase:SPAC607.05\|SGD:S000002835	150520179		GO_Central	GO_REF:0000033
PSMD13	Dog	protein-containing complex	part_of	IEA	ARBA:ARBA00028902	150520179		UniProt	GO_REF:0000117

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
PSMD13	Dog	protein binding	enables	ISO	UniProtKB:P55036	9068941	PMID:16990800, PMID:33961781, PMID:35271311	IntAct	PMID:16990800\|PMID:33961781\|PMID:35271311
PSMD13	Dog	structural molecule activity	enables	IBA	PANTHER:PTN000056911\|SGD:S000002835	150520179		GO_Central	GO_REF:0000033

PMID:30032202

PSMD13
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	18	25,388,212 - 25,401,071 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	18	25,388,229 - 25,401,070 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	18	25,038,159 - 25,051,024 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	18	25,914,884 - 25,927,833 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	18	25,914,909 - 25,927,831 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	18	25,482,879 - 25,495,885 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	18	25,127,656 - 25,140,594 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	18	25,740,396 - 25,753,256 (+)	NCBI		UU_Cfam_GSD_1.0

PSMD13
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	11	236,976 - 252,984 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	11	236,966 - 252,984 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	11	236,976 - 252,984 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	11	226,808 - 242,984 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	11	226,976 - 242,981	NCBI
Celera	11	306,187 - 322,313 (-)	NCBI		Celera
Cytogenetic Map	11	p15.5	NCBI
HuRef	11	56,490 - 72,652 (+)	NCBI		HuRef
CHM1_1	11	235,259 - 251,442 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	11	277,982 - 293,919 (+)	NCBI		T2T-CHM13v2.0

Psmd13
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	7	140,462,307 - 140,478,555 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	7	140,461,881 - 140,478,556 (+)	Ensembl		GRCm39 Ensembl
GRCm38	7	140,882,394 - 140,898,642 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	7	140,881,968 - 140,898,643 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	7	148,068,293 - 148,084,541 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	7	140,733,714 - 140,749,962 (+)	NCBI		MGSCv36	mm8
Celera	7	140,674,681 - 140,690,962 (+)	NCBI		Celera
Cytogenetic Map	7	F5	NCBI
cM Map	7	86.09	NCBI

Psmd13
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	205,394,248 - 205,406,525 (+)	NCBI		GRCr8
mRatBN7.2	1	195,964,617 - 195,976,895 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	195,964,138 - 195,976,905 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	204,318,943 - 204,331,548 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	211,445,846 - 211,458,434 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	204,119,697 - 204,132,285 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	213,636,159 - 213,648,499 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	213,636,093 - 213,648,488 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	220,561,663 - 220,574,033 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	201,044,403 - 201,057,026 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	1	201,194,414 - 201,206,667 (+)	NCBI
Celera	1	193,608,457 - 193,620,908 (+)	NCBI		Celera
Cytogenetic Map	1	q41	NCBI

Psmd13
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955476	11,780,791 - 11,794,839 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955476	11,782,461 - 11,794,839 (-)	NCBI	ChiLan1.0	ChiLan1.0

PSMD13
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	9	2,606,169 - 2,622,545 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	11	1,761,592 - 1,778,058 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	11	233,691 - 250,184 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	11	278,353 - 294,685 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	11	275,304 - 294,685 (+)	Ensembl	panpan1.1		panPan2

Psmd13
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	78,579 - 91,026 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936888	78,463 - 91,134 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936888	78,468 - 91,026 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

PSMD13
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	55,108 - 74,829 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	2	55,108 - 68,854 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	162,155,822 - 162,169,562 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

PSMD13
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	1	49,510 - 67,353 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666038	97,063,307 - 97,081,724 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Psmd13
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624766	22,187,068 - 22,199,630 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624766	22,188,064 - 22,199,721 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants in PSMD13
120 total Variants

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

adipose tissue	alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	reproductive system	respiratory system
6	5	5	23	22	16	6	6	6	6	33	22	12	14	10


RefSeq Transcripts	XM_038423965	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038500323	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038562886	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038627006	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_843364	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000018	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000212	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000037	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000176	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000018	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCAFT00000039828 ⟹ ENSCAFP00000035736

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	18	25,388,229 - 25,401,070 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00000076049 ⟹ ENSCAFP00000050423

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	18	25,389,541 - 25,401,070 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00000085748 ⟹ ENSCAFP00000055518

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	18	25,388,229 - 25,401,070 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00845050214 ⟹ ENSCAFP00845039371

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	18	25,914,909 - 25,927,831 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00845050243 ⟹ ENSCAFP00845039390

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	18	25,914,909 - 25,927,831 (+)	Ensembl

RefSeq Acc Id:

XM_038423965 ⟹ XP_038279893

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	18	25,914,884 - 25,927,833 (+)	NCBI

RefSeq Acc Id:

XM_038500323 ⟹ XP_038356251

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	18	25,482,879 - 25,495,885 (+)	NCBI

RefSeq Acc Id:

XM_038562886 ⟹ XP_038418814

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	18	25,740,396 - 25,753,256 (+)	NCBI

RefSeq Acc Id:

XM_038627006 ⟹ XP_038482934

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	18	25,127,656 - 25,140,594 (+)	NCBI

RefSeq Acc Id:

XM_843364 ⟹ XP_848457

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	18	25,388,212 - 25,401,071 (+)	NCBI
Dog10K_Boxer_Tasha	18	25,038,159 - 25,051,024 (+)	NCBI

Sequence:

show sequence

AAGTGAGCGAGCATTTCCGGCGGCCCTCGCCGTGGTGCTGACGCCTCCGTGGTGCCGCTCCCCGGCCTTCCCGCCGTCATGAAGGACGTACCGGGCTTCCTGCAGCAGAGCCAGAGCTCCGGGCCCGG
CCAGGCCGCCGTGTGGCACCGCCTGGAGGAGCTTTACACGAAGAAATTGTGGCATCAACTGACACTCCAGGTGCTTGATTTTGTGCAGGACCCATGCTTTGCCCAAGGAGATGGCCTCATTAAGCTTT
ATGAAAACTTCATCAGTGAATTTGAACACAGGGTGAATCCTCTGTCCCTGGTAGAAATTATTCTTCACGTAGTTAGACAGATGACTGATCCTAATGTGGCTCTTACTTTTCTGGAAAAGACTCGCGAA
AAGGTGAAAAGTAGCGATGAGGCAGTGATCCTGTGTAAAACTGCAATTGGAGCTCTAAAATTAAACATCGGGGACCTACAGGTTACAAAGGAAACAATTGAAGATGTCGAAGAGATGCTCAACAACCT
CCCTGGTGTGACCTCGGTTCACAGTCGTTTCTATGACCTCTCCAGTAAATACTATCAAACAATCGGAAACCATGCATCCTACTACAAAGATGCTCTGCGGTTTCTGGGCTGCGTCGATATCAAGGATC
TGCCAGTGTCTGAACAGCAGGAGAGAGCTTTCACGCTGGGACTAGCAGGACTTCTTGGCGAGGGCGTTTTTAACTTTGGAGAACTCCTCATGCACCCCGTGCTGGAATCACTGAGGAGCACCGACCGG
CAGTGGCTGATTGACACCCTGTATGCCTTTAACAGTGGTAACGTAGAGAGATTCCAGACGCTGAAGACTGCCTGGGGCCAGCAGCCTGATTTGGCAGCCAACGAGGCCCAGCTGCTGAGGAAAATCCA
ATTGTTGTGCCTCATGGAGATGACTTTCACACGACCTGCCAATCACAGACAACTCACTTTTGAAGAAATTGCCAAAAGTGCTAAAATCACTGTGAACGAGGTGGAGTTGCTGGTGATGAAGGCGCTCT
CAGTGGGGCTGGTGAAAGGCAGCATTGACGAGGTGGATAAGCGAGTTCACATGACCTGGGTGCAGCCCCGTGTGCTGGATCTGCAGCAGATCAAGGGGATGAAGGACCGCCTGGAGTTCTGGTGCACC
GACGTGAGGAGCATGGAGATGCTGGTGGAGCACCAGGCCCACGACATCCTCACCTAGTGCCCCTGCCTCACCGTCTGTGGCAGCTGGGAAGACCTGTGTTCCTGAGGAAGTAGGGGGTGGGATTGTGT
TTGTGGAGTGGGGACTGTTCTCCCTGCTGTGAAATCAGGACGTCACTCATGGGGGGCCCGCCTGCAGAGAGAAGCCTCCTTTGTGGGGGTGTCCCGTAGTTCTCAGTGGGGAGGGGTCACGGGTCTCC
AGTGAGGAGGAGGCGGGCAAGAGTGTGTGTGCGCCCCGAGGAACGAGGAGTAGCCCTCAAGTGTGTGGGGATGCCACTCAGGCTCATCTCCACCATCTACCTGTGTCAACATCTCTGCTGTTGTTCAA
GAATGTTCCTGTAATAAACGCCTTTGTTTTGTCTA

hide sequence


Protein RefSeqs	XP_038279893	(Get FASTA)	NCBI Sequence Viewer
	XP_038356251	(Get FASTA)	NCBI Sequence Viewer
	XP_038418814	(Get FASTA)	NCBI Sequence Viewer
	XP_038482934	(Get FASTA)	NCBI Sequence Viewer
	XP_848457	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000035736.2
	ENSCAFP00000050423.2
	ENSCAFP00000055518.1
	ENSCAFP00030012664.1
	ENSCAFP00030012766.1
	ENSCAFP00040036393.1
	ENSCAFP00040036436.1
	ENSCAFP00845039371
	ENSCAFP00845039371.1
	ENSCAFP00845039390.1

RefSeq Acc Id:

XP_848457 ⟸ XM_843364

- UniProtKB:

A0A8C0K3L1 (UniProtKB/TrEMBL), A0A8C0TIV2 (UniProtKB/TrEMBL), A0A8I3S6Q5 (UniProtKB/TrEMBL), A0A8C0K545 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MKDVPGFLQQSQSSGPGQAAVWHRLEELYTKKLWHQLTLQVLDFVQDPCFAQGDGLIKLYENFISEFEHRVNPLSLVEIILHVVRQMTDPNVALTFLEKTREKVKSSDEAVILCKTAIGALKLNIGDL
QVTKETIEDVEEMLNNLPGVTSVHSRFYDLSSKYYQTIGNHASYYKDALRFLGCVDIKDLPVSEQQERAFTLGLAGLLGEGVFNFGELLMHPVLESLRSTDRQWLIDTLYAFNSGNVERFQTLKTAWG
QQPDLAANEAQLLRKIQLLCLMEMTFTRPANHRQLTFEEIAKSAKITVNEVELLVMKALSVGLVKGSIDEVDKRVHMTWVQPRVLDLQQIKGMKDRLEFWCTDVRSMEMLVEHQAHDILT

hide sequence

Ensembl Acc Id:

ENSCAFP00000035736 ⟸ ENSCAFT00000039828

Ensembl Acc Id:

ENSCAFP00000050423 ⟸ ENSCAFT00000076049

Ensembl Acc Id:

ENSCAFP00000055518 ⟸ ENSCAFT00000085748

RefSeq Acc Id:

XP_038356251 ⟸ XM_038500323

Protein Domains

PCI

RGD ID:

13686458

Promoter ID:

EPDNEW_C4526

Type:

initiation region

Name:

PSMD13_1

Description:

proteasome 26S subunit, non-ATPase 13

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	18	25,388,224 - 25,388,284	EPDNEW

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000006455	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00030007901	UniProtKB/TrEMBL
	ENSCAFG00040022467	UniProtKB/TrEMBL
	ENSCAFG00845028438	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000039828.4	UniProtKB/TrEMBL
	ENSCAFT00000076049.2	UniProtKB/TrEMBL
	ENSCAFT00000085748.2	UniProtKB/TrEMBL
	ENSCAFT00030014522.1	UniProtKB/TrEMBL
	ENSCAFT00030014635.1	UniProtKB/TrEMBL
	ENSCAFT00040041718.1	UniProtKB/TrEMBL
	ENSCAFT00040041768.1	UniProtKB/TrEMBL
	ENSCAFT00845050214	ENTREZGENE
	ENSCAFT00845050214.1	UniProtKB/TrEMBL
	ENSCAFT00845050243.1	UniProtKB/TrEMBL
InterPro	PCI_dom	UniProtKB/TrEMBL
	PSD13_N	UniProtKB/TrEMBL
	PSMD13	UniProtKB/TrEMBL
	WH_DNA-bd_sf	UniProtKB/TrEMBL
KEGG Report	cfa:475934	UniProtKB/TrEMBL
NCBI Gene	PSMD13	ENTREZGENE
PANTHER	26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 13	UniProtKB/TrEMBL
	PTHR10539	UniProtKB/TrEMBL
Pfam	PCI	UniProtKB/TrEMBL
	PSD13_N	UniProtKB/TrEMBL
PROSITE	PCI	UniProtKB/TrEMBL
SMART	PINT	UniProtKB/TrEMBL
Superfamily-SCOP	SSF46785	UniProtKB/TrEMBL
UniProt	A0A8C0K3L1	ENTREZGENE
	A0A8C0K545	ENTREZGENE
	A0A8C0MP89_CANLF	UniProtKB/TrEMBL
	A0A8C0TIV2	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3Q075_CANLF	UniProtKB/TrEMBL
	A0A8I3S6Q5	ENTREZGENE, UniProtKB/TrEMBL
	A0A8P0T327_CANLF	UniProtKB/TrEMBL
VGNC ID	VGNC:45109	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD