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Gene: ARID3C (AT-rich interaction domain 3C) Canis lupus familiaris

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Symbol:

ARID3C

Name:

AT-rich interaction domain 3C

RGD ID:

12181510

Description:

ENCODES a protein that exhibits chromatin binding (inferred); DNA binding (inferred); DNA-binding transcription factor activity, RNA polymerase II-specific (inferred); INVOLVED IN macrophage differentiation (inferred); positive regulation of transcription by RNA polymerase II (inferred); regulation of transcription by RNA polymerase II (inferred); ASSOCIATED WITH acromesomelic dysplasia, Maroteaux type (ortholog); anauxetic dysplasia (ortholog); autosomal recessive distal hereditary motor neuronopathy 2 (ortholog); FOUND IN cytoplasm (inferred); membrane raft (inferred); nucleus (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

AT-rich interactive domain-containing protein 3C

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	11	51,294,605 - 51,301,979 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	11	51,295,030 - 51,301,547 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	11	49,922,506 - 49,930,320 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	11	52,234,892 - 52,242,709 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	11	52,235,759 - 52,242,279 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	11	50,897,603 - 50,905,422 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	11	50,765,803 - 50,773,609 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	11	51,530,526 - 51,538,340 (-)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
ARID3C	Dog	acromesomelic dysplasia, Maroteaux type		ISO	ARID3C (Homo sapiens)	8554872	ClinVar Annotator: match by term: Acromesomelic dysplasia 1 and Maroteaux type	ClinVar	PMID:28492532
ARID3C	Dog	anauxetic dysplasia		ISO	ARID3C (Homo sapiens)	8554872	ClinVar Annotator: match by term: Anauxetic dysplasia	ClinVar	PMID:28492532
ARID3C	Dog	autosomal recessive distal hereditary motor neuronopathy 2		ISO	ARID3C (Homo sapiens)	8554872	ClinVar Annotator: match by term: Autosomal recessive distal spinal muscular atrophy 2	ClinVar	PMID:28492532
ARID3C	Dog	distal arthrogryposis type 1A		ISO	ARID3C (Homo sapiens)	8554872	ClinVar Annotator: match by term: Arthrogryposis more ...	ClinVar	PMID:28492532
ARID3C	Dog	frontotemporal dementia and/or amyotrophic lateral sclerosis 6		ISO	ARID3C (Homo sapiens)	8554872	ClinVar Annotator: match by term: Frontotemporal dementia and/or amyotrophic lateral sclerosis 6	ClinVar	PMID:28492532
ARID3C	Dog	galactosemia		ISO	ARID3C (Homo sapiens)	8554872	ClinVar Annotator: match by term: Deficiency of UDPglucose-hexose-1-phosphate uridylyltransferase	ClinVar	PMID:28492532
ARID3C	Dog	hyperphosphatasia with impaired intellectual development syndrome 2		ISO	ARID3C (Homo sapiens)	8554872	ClinVar Annotator: match by term: GLYCOSYLPHOSPHATIDYLINOSITOL BIOSYNTHESIS DEFECT 6	ClinVar	PMID:22683086 more ...
ARID3C	Dog	paraplegia		ISO	ARID3C (Homo sapiens)	8554872	ClinVar Annotator: match by term: Spastic paraplegia	ClinVar	PMID:23332916 more ...
ARID3C	Dog	primary ciliary dyskinesia		ISO	ARID3C (Homo sapiens)	8554872	ClinVar Annotator: match by term: Primary ciliary dyskinesia	ClinVar	PMID:28492532

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
ARID3C	Dog	macrophage differentiation	involved_in	IEA	UniProtKB:A6NKF2 and ensembl:ENSP00000368189	150520179		Ensembl	GO_REF:0000107
ARID3C	Dog	positive regulation of transcription by RNA polymerase II	acts_upstream_of_or_within	IEA	UniProtKB:A6PWV5 and ensembl:ENSMUSP00000127678	150520179		Ensembl	GO_REF:0000107
ARID3C	Dog	regulation of transcription by RNA polymerase II	involved_in	IEA	InterPro:IPR045147	150520179		InterPro	GO_REF:0000002
ARID3C	Dog	regulation of transcription by RNA polymerase II	involved_in	IBA	FB:FBgn0004795 more ...	150520179		GO_Central	GO_REF:0000033

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
ARID3C	Dog	cytoplasm	located_in	IEA	UniProtKB:A6PWV5 and ensembl:ENSMUSP00000127678	150520179		Ensembl	GO_REF:0000107
ARID3C	Dog	membrane raft	located_in	IEA	UniProtKB:A6NKF2 and ensembl:ENSP00000368189	150520179		Ensembl	GO_REF:0000107
ARID3C	Dog	nucleus	located_in	IEA	UniProtKB-SubCell:SL-0191	150520179		UniProt	GO_REF:0000044
ARID3C	Dog	nucleus	is_active_in	IBA	FB:FBgn0004795 more ...	150520179		GO_Central	GO_REF:0000033
ARID3C	Dog	nucleus	located_in	IEA	UniProtKB:A6PWV5 and ensembl:ENSMUSP00000127678	150520179		Ensembl	GO_REF:0000107
ARID3C	Dog	nucleus	is_active_in	IEA	UniProtKB:A6NKF2 and ensembl:ENSP00000368189	150520179		Ensembl	GO_REF:0000107
ARID3C	Dog	nucleus	located_in	IEA	UniRule:UR001695777	150520179		UniProt	GO_REF:0000104
ARID3C	Dog	nucleus	located_in	IEA	UniProtKB-KW:KW-0539	150520179		UniProt	GO_REF:0000043

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
ARID3C	Dog	chromatin binding	enables	IEA	UniProtKB:A6PWV5 and ensembl:ENSMUSP00000127678	150520179		Ensembl	GO_REF:0000107
ARID3C	Dog	DNA binding	enables	IEA	UniRule:UR001695777	150520179		UniProt	GO_REF:0000104
ARID3C	Dog	DNA binding	enables	IBA	FB:FBgn0004795 more ...	150520179		GO_Central	GO_REF:0000033
ARID3C	Dog	DNA binding	enables	IEA	UniProtKB-KW:KW-0238	150520179		UniProt	GO_REF:0000043
ARID3C	Dog	DNA binding	enables	IEA	InterPro:IPR001606 and InterPro:IPR036431	150520179		InterPro	GO_REF:0000002
ARID3C	Dog	DNA-binding transcription factor activity, RNA polymerase II-specific	enables	IEA	UniProtKB:A6NKF2 and ensembl:ENSP00000368189	150520179		Ensembl	GO_REF:0000107
ARID3C	Dog	protein binding	enables	ISO	UniProtKB:O00257-3 more ...	9068941	PMID:32296183	IntAct	PMID:32296183
ARID3C	Dog	protein binding	enables	ISO	PR:Q62431	9068941	PMID:21955986	MGI	PMID:21955986

PMID:22301074	PMID:30032202

ARID3C
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	11	51,294,605 - 51,301,979 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	11	51,295,030 - 51,301,547 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	11	49,922,506 - 49,930,320 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	11	52,234,892 - 52,242,709 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	11	52,235,759 - 52,242,279 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	11	50,897,603 - 50,905,422 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	11	50,765,803 - 50,773,609 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	11	51,530,526 - 51,538,340 (-)	NCBI		UU_Cfam_GSD_1.0

ARID3C
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	9	34,621,049 - 34,633,011 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	9	34,621,049 - 34,629,066 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	9	34,621,046 - 34,629,063 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	9	34,611,455 - 34,618,011 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	9	34,552,959 - 34,559,515 (-)	NCBI		Celera
Cytogenetic Map	9	p13.3	NCBI
HuRef	9	34,575,737 - 34,582,294 (-)	NCBI		HuRef
CHM1_1	9	34,621,235 - 34,627,787 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	9	34,639,596 - 34,650,042 (-)	NCBI		T2T-CHM13v2.0

Arid3c
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	4	41,723,830 - 41,731,226 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	4	41,723,836 - 41,731,142 (-)	Ensembl		GRCm39 Ensembl
GRCm38	4	41,723,831 - 41,731,142 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	4	41,723,836 - 41,731,142 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	4	41,670,868 - 41,678,174 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	4	41,912,903 - 41,918,863 (-)	NCBI		MGSCv36	mm8
Celera	4	41,384,044 - 41,391,382 (-)	NCBI		Celera
Cytogenetic Map	4	A5	NCBI
cM Map	4	22.01	NCBI

Arid3c
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	61,685,511 - 61,692,821 (-)	NCBI		GRCr8
mRatBN7.2	5	56,889,649 - 56,896,959 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	56,890,042 - 56,895,888 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	5	58,869,550 - 58,875,393 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	5	60,688,382 - 60,694,225 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	5	60,674,253 - 60,680,097 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	5	58,107,182 - 58,114,632 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	58,107,707 - 58,113,553 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	5	62,631,772 - 62,637,618 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	5	59,148,421 - 59,154,267 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	5	55,484,083 - 55,489,929 (-)	NCBI		Celera
Cytogenetic Map	5	q22	NCBI

Arid3c
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955472	1,504,032 - 1,510,590 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955472	1,503,448 - 1,510,965 (+)	NCBI	ChiLan1.0	ChiLan1.0

ARID3C
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	11	89,974,694 - 89,982,711 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	9	89,975,061 - 89,989,017 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	9	34,457,638 - 34,466,425 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	9	35,267,063 - 35,275,057 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	9	35,267,063 - 35,275,057 (-)	Ensembl	panpan1.1		panPan2

Arid3c
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	166,157,164 - 166,165,371 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936524	2,705,121 - 2,711,557 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936524	2,705,112 - 2,711,557 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ARID3C
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	10	32,172,871 - 32,180,604 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	10	32,171,233 - 32,187,239 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	10	36,312,954 - 36,321,471 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

Arid3c
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624736	39,016,483 - 39,023,668 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624736	39,016,483 - 39,023,701 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants in ARID3C
44 total Variants

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

adipose tissue	alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	reproductive system	respiratory system
2	4	1	22	16	7	2	5	2	6	20	14	12	14	5


RefSeq Transcripts	XM_005626734	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038490554	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038490555	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038552668	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038552669	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038616529	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038616530	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038681997	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038681998	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_849563	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000011	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000118	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000003	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000356	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000011	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCAFT00000028460 ⟹ ENSCAFP00000026469

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	11	51,295,030 - 51,301,547 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00845043527 ⟹ ENSCAFP00845034101

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	11	52,235,759 - 52,242,279 (-)	Ensembl

RefSeq Acc Id:

XM_005626734 ⟹ XP_005626791

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	11	51,294,605 - 51,301,979 (-)	NCBI
Dog10K_Boxer_Tasha	11	49,922,506 - 49,930,320 (-)	NCBI

Sequence:

show sequence

CTTTCTGTTTCTCTATCTCTCCTGTCATTGTCTCTCCCTTGGATCTCGCTCGTGCGCTCTCCTCCCCCCTTCCCCTCCCTTTCTCTGTTTCTTCGTCCTTGTCACCCTCTCTGATCTGCTTGGTCTCT
ATCTATCCTCTGTCAATGTTCATTTCTGTCTCTTTGGGTCTGGGCTCGTGTCTCTCCTGCTCTTTCTACTTCTGTCTCTTCTCTTCTTCTGTCTCTGTCCATCTCTGAGAAAGCTATCTTTCTGCTTT
TTTCTTATGGCCCCCGACACTTCCCTGAATCAATGACCACCTCCTCTTGTGCTGGGGGTTATGGGGACAGCAGGGCCCAACACTCATAATTCCCACCCCCACAGGCGGCCCTTTCCTCGGGGCCCCGC
CTGGTGCCAGCCCCCCCACAAGCGGGGGGACTGCGCCTGGAAGCTGTAATGGAGGCCCTGCAGAGGCAGCAGGCAGCCCGACTGGCCCAAGGGGTGGGGCCATTGGTCCCTCCGCACCCACTGCCACC
ACCACTACCTCTCTTGCCCGGCCCCCGGACCCTACAGGCCCCTGAGGGGGCCTTGGGGGAGGTTGGGACAGAAGAAGAGGAGGATGCTGAAGAGGATGAGGAAGGGGAGGAAGCCGGGGCAGAGGAGG
AGGCAACCGAGGAGAGCCATACAGGGACCCGGGGCCCCAGCTCACCTTCCAGCCAACCTCCTGGACCTCATCCCCATGAATGGACCTACGAGGAACAGTTCAAGCAGCTGTACGAGCTTGATGCAGAC
CCCAAGAGGAAGGAATTTCTGGATGACCTGTTTAGCTTCATGCAGAAGAGGGGGACGCCAGTGAACCGCGTGCCCATCATGGCGAAGCAGGTGCTGGACCTGTACGCGCTCTTTCGCCTGGTGACCGC
CAAAGGTGGCCTGGTGGAAGTCATCAACCGCAAGGTGTGGAGGGAGGTCACGCGCGGCCTCAGCCTGCCCACCACCATCACGTCGGCAGCCTTCACTCTACGCACCCAGTACATGAAGTACCTGTACC
CCTACGAGTGCGAGACGCGGGCTCTCAGCTCCCCGGGGGAGCTCCAGGCAGCCATCGACAGCAACCGGCGCGAGGGCCGTCGTCAGGCTTATACCGCCGCCCCGCTGTACGGCTTAGCCGGCCCTACC
CCTCGGGGACCTCCCGGCCAAATCTCCACTCCTGGAGCCGCAGCGCCCGCGCCCACGCCCAGCCCCCGCCCTGCCCCCGGCTCCGCCTCCGGCCTACCGGCGCACGCCTGCGCGCAGCTCAGCCGGAG
CCCCATTAAGAAAGAGGAAAGTGGAATTCCAGCCCCTCGACTGGCACTGCCTGTGGGCCTGGCTTTGGGGCCTACAAGGGAGAAATTGGCACCAGAGGAGCCCCCAGAGAAGAGGGCTGTGCTGATGG
GGCACATGGATCCACCTCGACCTGGAGCTCCCCCCAGTTTCCTGCCCCGTGGCAAGGTTCCTCTGAGGGGTGTCCTGTTTGCCCGTCGCCAGTCTGTGCCAGCTTCCCAGGGCCCAACCAACCCTGCA
CCTCCTCTCCCTACAGGGCCCCCTTCCAGCACCTCACCCTGAGAACTCCCACTTGGAATAAAGAGTCCTGGCCCCAATGCTGAGGGTTGGGGGGAGGAGACATCCCCCACAACTTGATTCTTCCAGGC
TGCCCACTCTAGGACCCAGCCTTGGGAGAGGATCCCTTACCCACCATGCCATGTAGACTTGAAGCCAAAGAGTTTTCTTTTGATGTTACATCTACCTCATTGTAACGGGAGAGCACCTCCTCCCTGGC
CAACCCCAGCAGCATCTACCAAAGAGTTCTGACCCAGTAACCCTCATCATCTCCTCATGTGCCTCCCTGTGTCAATGTCATCTCTAGGACCCCACCTCTTCAGATCAGACCTGCTTCTCTTCAGAAGC
CATGTGAAGGGTTAGGTTGGGTGTTGTGAAGGAGTCGATCCTCAGGTCACATCTGCATAATAAAGCTGCAGTCCCTCCCTCTC

hide sequence

RefSeq Acc Id:

XM_038490554 ⟹ XP_038346482

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	11	50,897,603 - 50,905,422 (-)	NCBI

RefSeq Acc Id:

XM_038490555 ⟹ XP_038346483

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	11	50,897,603 - 50,905,422 (-)	NCBI

RefSeq Acc Id:

XM_038552668 ⟹ XP_038408596

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	11	51,530,526 - 51,538,340 (-)	NCBI

RefSeq Acc Id:

XM_038552669 ⟹ XP_038408597

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	11	51,530,526 - 51,538,340 (-)	NCBI

RefSeq Acc Id:

XM_038616529 ⟹ XP_038472457

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	11	50,765,803 - 50,773,609 (-)	NCBI

RefSeq Acc Id:

XM_038616530 ⟹ XP_038472458

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	11	50,765,803 - 50,773,609 (-)	NCBI

RefSeq Acc Id:

XM_038681997 ⟹ XP_038537925

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	11	52,234,892 - 52,242,709 (-)	NCBI

RefSeq Acc Id:

XM_038681998 ⟹ XP_038537926

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	11	52,234,892 - 52,242,709 (-)	NCBI

RefSeq Acc Id:

XM_849563 ⟹ XP_854656

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	11	51,294,605 - 51,301,979 (-)	NCBI
Dog10K_Boxer_Tasha	11	49,922,506 - 49,930,320 (-)	NCBI

Sequence:

show sequence

CTTTCTGTTTCTCTATCTCTCCTGTCATTGTCTCTCCCTTGGATCTCGCTCGTGCGCTCTCCTCCCCCCTTCCCCTCCCTTTCTCTGTTTCTTCGTCCTTGTCACCCTCTCTGATCTGCTTGGTCTCT
ATCTATCCTCTGTCAATGTTCATTTCTGTCTCTTTGGGTCTGGGCTCGTGTCTCTCCTGCTCTTTCTACTTCTGTCTCTTCTCTTCTTCTGTCTCTGTCCATCTCTGAGAAAGCTATCTTTCTGCTTT
TTTCTTATGGCCCCCGACACTTCCCTGAATCAATGACCACCTCCTCTTGTGCTGGGGGTTATGGGGACAGCAGGGCCCAACACTCATAATTCCCACCCCCACAGGCGGCCCTTTCCTCGGGGCCCCGC
CTGGTGCCAGCCCCCCCACAAGCGGGGGGACTGCGCCTGGAAGCTGTAATGGAGGCCCTGCAGAGGCAGCAGGCAGCCCGACTGGCCCAAGGGGTGGGGCCATTGGTCCCTCCGCACCCACTGCCACC
ACCACTACCTCTCTTGCCCGGCCCCCGGACCCTACAGGCCCCTGAGGGGGCCTTGGGGGAGGTTGGGACAGAAGAAGAGGAGGATGCTGAAGAGGATGAGGAAGGGGAGGAAGCCGGGGCAGAGGAGG
AGGCAACCGAGGAGAGCCATACAGGGACCCGGGGCCCCAGCTCACCTTCCAGCCAACCTCCTGGACCTCATCCCCATGAATGGACCTACGAGGAACAGTTCAAGCAGCTGTACGAGCTTGATGCAGAC
CCCAAGAGGAAGGAATTTCTGGATGACCTGTTTAGCTTCATGCAGAAGAGGGGGACGCCAGTGAACCGCGTGCCCATCATGGCGAAGCAGGTGCTGGACCTGTACGCGCTCTTTCGCCTGGTGACCGC
CAAAGGTGGCCTGGTGGAAGTCATCAACCGCAAGGTGTGGAGGGAGGTCACGCGCGGCCTCAGCCTGCCCACCACCATCACGTCGGCAGCCTTCACTCTACGCACCCAGTACATGAAGTACCTGTACC
CCTACGAGTGCGAGACGCGGGCTCTCAGCTCCCCGGGGGAGCTCCAGGCAGCCATCGACAGCAACCGGCGCGAGGGCCGTCGTCAGGCTTATACCGCCGCCCCGCTGTACGGCTTAGCCGGCCCTACC
CCTCGGGGACCTCCCGGCCAAATCTCCACTCCTGGAGCCGCAGCGCCCGCGCCCACGCCCAGCCCCCGCCCTGCCCCCGGCTCCGCCTCCGGCCTACCGGCGCACGCCTGCGCGCAGCTCAGCCGGAG
CCCCATTAAGAAAGAGGAAAGTGGAATTCCAGCCCCTCGACTGGCACTGCCTGTGGGCCTGGCTTTGGGGCCTACAAGGGAGAAATTGGCACCAGAGGAGCCCCCAGAGAAGAGGGCTGTGCTGATGG
GGCACATGGATCCACCTCGACCTGGAGCTCCCCCCAGTTTCCTGCCCCGTGGCAAGGTTCCTCTGAGGGAAGAGCGGCTGGATGGGCCTCTCAATCTGGCAGGAAGTGGTATCAGCAGTATCAACATG
GCCCTAGAGATCAACGGGGTAGTCTACACTGGTGTCCTGTTTGCCCGTCGCCAGTCTGTGCCAGCTTCCCAGGGCCCAACCAACCCTGCACCTCCTCTCCCTACAGGGCCCCCTTCCAGCACCTCACC
CTGAGAACTCCCACTTGGAATAAAGAGTCCTGGCCCCAATGCTGAGGGTTGGGGGGAGGAGACATCCCCCACAACTTGATTCTTCCAGGCTGCCCACTCTAGGACCCAGCCTTGGGAGAGGATCCCTT
ACCCACCATGCCATGTAGACTTGAAGCCAAAGAGTTTTCTTTTGATGTTACATCTACCTCATTGTAACGGGAGAGCACCTCCTCCCTGGCCAACCCCAGCAGCATCTACCAAAGAGTTCTGACCCAGT
AACCCTCATCATCTCCTCATGTGCCTCCCTGTGTCAATGTCATCTCTAGGACCCCACCTCTTCAGATCAGACCTGCTTCTCTTCAGAAGCCATGTGAAGGGTTAGGTTGGGTGTTGTGAAGGAGTCGA
TCCTCAGGTCACATCTGCATAATAAAGCTGCAGTCCCTCCCTCTC

hide sequence


Protein RefSeqs	XP_005626791	(Get FASTA)	NCBI Sequence Viewer
	XP_038346482	(Get FASTA)	NCBI Sequence Viewer
	XP_038346483	(Get FASTA)	NCBI Sequence Viewer
	XP_038408596	(Get FASTA)	NCBI Sequence Viewer
	XP_038408597	(Get FASTA)	NCBI Sequence Viewer
	XP_038472457	(Get FASTA)	NCBI Sequence Viewer
	XP_038472458	(Get FASTA)	NCBI Sequence Viewer
	XP_038537925	(Get FASTA)	NCBI Sequence Viewer
	XP_038537926	(Get FASTA)	NCBI Sequence Viewer
	XP_854656	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000026469.4
	ENSCAFP00030008102.1
	ENSCAFP00040014603.1
	ENSCAFP00845034101
	ENSCAFP00845034101.1

RefSeq Acc Id:	XP_005626791 ⟸ XM_005626734
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0KTV1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEALQRQQAARLAQGVGPLVPPHPLPPPLPLLPGPRTLQAPEGALGEVGTEEEEDAEEDEEGEEAGAEEEATEESHTGTRGPSSPSSQPPGPHPHEWTYEEQFKQLYELDADPKRKEFLDDLFSFMQK RGTPVNRVPIMAKQVLDLYALFRLVTAKGGLVEVINRKVWREVTRGLSLPTTITSAAFTLRTQYMKYLYPYECETRALSSPGELQAAIDSNRREGRRQAYTAAPLYGLAGPTPRGPPGQISTPGAAAP APTPSPRPAPGSASGLPAHACAQLSRSPIKKEESGIPAPRLALPVGLALGPTREKLAPEEPPEKRAVLMGHMDPPRPGAPPSFLPRGKVPLRGVLFARRQSVPASQGPTNPAPPLPTGPPSSTSP hide sequence

RefSeq Acc Id:	XP_854656 ⟸ XM_849563
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0MCN7 (UniProtKB/TrEMBL), A0A8I3PR68 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEALQRQQAARLAQGVGPLVPPHPLPPPLPLLPGPRTLQAPEGALGEVGTEEEEDAEEDEEGEEAGAEEEATEESHTGTRGPSSPSSQPPGPHPHEWTYEEQFKQLYELDADPKRKEFLDDLFSFMQK RGTPVNRVPIMAKQVLDLYALFRLVTAKGGLVEVINRKVWREVTRGLSLPTTITSAAFTLRTQYMKYLYPYECETRALSSPGELQAAIDSNRREGRRQAYTAAPLYGLAGPTPRGPPGQISTPGAAAP APTPSPRPAPGSASGLPAHACAQLSRSPIKKEESGIPAPRLALPVGLALGPTREKLAPEEPPEKRAVLMGHMDPPRPGAPPSFLPRGKVPLREERLDGPLNLAGSGISSINMALEINGVVYTGVLFAR RQSVPASQGPTNPAPPLPTGPPSSTSP hide sequence

Ensembl Acc Id:

ENSCAFP00000026469 ⟸ ENSCAFT00000028460

RefSeq Acc Id:	XP_038346483 ⟸ XM_038490555
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038346482 ⟸ XM_038490554
- Peptide Label:	isoform X1

Protein Domains

ARID REKLES

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000024873	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00030005001	UniProtKB/TrEMBL
	ENSCAFG00040009088	UniProtKB/TrEMBL
	ENSCAFG00845024639	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000028460.6	UniProtKB/TrEMBL
	ENSCAFT00030009238.1	UniProtKB/TrEMBL
	ENSCAFT00040016848.1	UniProtKB/TrEMBL
	ENSCAFT00845043527	ENTREZGENE
	ENSCAFT00845043527.1	UniProtKB/TrEMBL
Gene3D-CATH	1.10.150.60	UniProtKB/TrEMBL
InterPro	ARI3A/B/C	UniProtKB/TrEMBL
	ARID_dom	UniProtKB/TrEMBL
	ARID_dom_sf	UniProtKB/TrEMBL
	REKLES_domain	UniProtKB/TrEMBL
NCBI Gene	ARID3C	ENTREZGENE
PANTHER	AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 3C	UniProtKB/TrEMBL
	PTHR15348	UniProtKB/TrEMBL
Pfam	ARID	UniProtKB/TrEMBL
PROSITE	ARID	UniProtKB/TrEMBL
	REKLES	UniProtKB/TrEMBL
SMART	ARID	UniProtKB/TrEMBL
	BRIGHT	UniProtKB/TrEMBL
Superfamily-SCOP	SSF46774	UniProtKB/TrEMBL
UniProt	A0A8C0KTV1	ENTREZGENE
	A0A8C0MCN7	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3PR68	ENTREZGENE, UniProtKB/TrEMBL
VGNC ID	VGNC:38097	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

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Imported Disease Annotations - ClinVar