SCAF4 (SR-related CTD associated factor 4) - Rat Genome Database

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Gene: SCAF4 (SR-related CTD associated factor 4) Canis lupus familiaris
Analyze
Symbol: SCAF4
Name: SR-related CTD associated factor 4
RGD ID: 12134159
Description: ENCODES a protein that exhibits nucleic acid binding (inferred); RNA binding (inferred); RNA polymerase II C-terminal domain phosphoserine binding (inferred); INVOLVED IN mRNA processing (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis type 1 (ortholog); autosomal dominant intellectual developmental disorder 7 (ortholog); developmental and epileptic encephalopathy 11 (ortholog); FOUND IN nucleoplasm (inferred); nucleus (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: splicing factor, arginine/serine-rich 15; SR-related and CTD-associated factor 4
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13126,546,801 - 26,583,040 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3126,547,108 - 26,636,811 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3126,538,227 - 26,597,009 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03126,665,041 - 26,723,881 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3126,665,575 - 26,756,253 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13126,610,942 - 26,669,751 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03126,622,773 - 26,681,555 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03127,129,000 - 27,187,809 (-)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


1 to 12 of 12 rows
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
SCAF4Dogamyotrophic lateral sclerosis type 1  ISORGD:13178928554872ClinVar Annotator: match by term: Amyotrophic lateral sclerosis type 1ClinVarPMID:16435343|PMID:17237124|PMID:19635794|PMID:23280792|PMID:23512985|PMID:23872456|PMID:25741868|PMID:28291249|PMID:28492532|PMID:32397312|PMID:9455977|PMID:9506558
SCAF4Dogautosomal dominant intellectual developmental disorder 7  ISORGD:13178928554872ClinVar Annotator: match by term: DYRK1A-related intellectual disability syndromeClinVarPMID:17237124|PMID:23512985|PMID:28492532
SCAF4Dogdevelopmental and epileptic encephalopathy 11  ISORGD:13178928554872ClinVar Annotator: match by term: Complex neurodevelopmental disorderClinVarPMID:25741868|PMID:32730804
SCAF4DogFamilial Platelet Disorder with Associated Myeloid Malignancy  ISORGD:13178928554872ClinVar Annotator: match by term: Hereditary thrombocytopenia and hematological cancer predisposition syndrome associated with RUNX1ClinVarPMID:17237124|PMID:23512985|PMID:28492532
SCAF4DogFLIEDNER-ZWEIER SYNDROME  ISORGD:13178928554872ClinVar Annotator: match by term: Fliedner-Zweier syndrome | ClinVar Annotator: match by term: SCAF4-related conditionClinVarPMID:25741868|PMID:32730804|PMID:36333968|PMID:37394306|PMID:7477272
SCAF4Doggenetic disease  ISORGD:13178928554872ClinVar Annotator: match by term: Inborn genetic diseasesClinVarPMID:25741868|PMID:32730804|PMID:37394306
SCAF4Dogimmunodeficiency 28  ISORGD:13178928554872ClinVar Annotator: match by term: Immunodeficiency 28ClinVarPMID:17237124|PMID:23512985|PMID:28492532
SCAF4Dogintellectual disability  ISORGD:13178928554872ClinVar Annotator: match by term: Intellectual disabilityClinVarPMID:25741868
SCAF4DogMulticystic Dysplastic Kidney  ISORGD:13178928554872ClinVar Annotator: match by term: Multicystic dysplastic kidneyClinVar 
SCAF4Dogneurodevelopmental disorder with dysmorphic facies and distal limb anomalies  ISORGD:13178928554872ClinVar Annotator: match by term: Neurodevelopmental disorder with dysmorphic facies and distal limb anomaliesClinVarPMID:25741868
SCAF4DogNeurodevelopmental Disorders  ISORGD:13178928554872ClinVar Annotator: match by term: Neurodevelopmental disorder | ClinVar Annotator: match by term: SCAF4-associated Neurodevelopmental more ...ClinVarPMID:25741868|PMID:32730804
SCAF4DogParkinson's disease 20  ISORGD:13178928554872ClinVar Annotator: match by term: Early-onset Parkinson disease 20ClinVarPMID:28492532
1 to 12 of 12 rows
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
SCAF4DogFLIEDNER-ZWEIER SYNDROME  ISORGD:13178927240710 OMIM 


Biological Process

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
SCAF4DogmRNA processing  ISORGD:7278969068941 RGDPMID:8692929|REF_RGD_ID:1299392
SCAF4Dognegative regulation of termination of RNA polymerase II transcription, poly(A)-coupled involved_inIEAUniProtKB:O95104|ensembl:ENSP00000286835150520179 EnsemblGO_REF:0000107
SCAF4Dognegative regulation of termination of RNA polymerase II transcription, poly(A)-coupled involved_inIBAPANTHER:PTN002751398|UniProtKB:O95104150520179 GO_CentralGO_REF:0000033

Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
SCAF4Dognucleoplasm located_inIEAUniProtKB:O95104|ensembl:ENSP00000286835150520179 EnsemblGO_REF:0000107
SCAF4Dognucleus located_inIEAUniProtKB:O95104|ensembl:ENSP00000286835150520179 EnsemblGO_REF:0000107
SCAF4Dognucleus is_active_inIBAMGI:1915208|PANTHER:PTN000567169|TAIR:locus:2179295|UniProtKB:O15042|UniProtKB:O95104150520179 GO_CentralGO_REF:0000033

Molecular Function
1 to 9 of 9 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
SCAF4Dognucleic acid binding enablesIEAInterPro:IPR035979150520179 InterProGO_REF:0000002
SCAF4Dogprotein binding  ISORGD:15570719068941protein C-terminus bindingRGDPMID:8692929|REF_RGD_ID:1299392
SCAF4DogRNA binding enablesIEAInterPro:IPR000504150520179 InterProGO_REF:0000002
SCAF4DogRNA binding enablesIBAFB:FBgn0034598|PANTHER:PTN000567169|UniProtKB:O95104150520179 GO_CentralGO_REF:0000033
SCAF4DogRNA binding enablesIEAUniProtKB:O95104|ensembl:ENSP00000286835150520179 EnsemblGO_REF:0000107
SCAF4DogRNA binding enablesIEAUniRule:UR000414619150520179 UniProtGO_REF:0000104
SCAF4DogRNA binding enablesIEAUniProtKB-KW:KW-0694150520179 UniProtGO_REF:0000043
SCAF4DogRNA polymerase II C-terminal domain phosphoserine binding enablesIEAUniProtKB:O95104|ensembl:ENSP00000286835150520179 EnsemblGO_REF:0000107
SCAF4DogRNA polymerase II C-terminal domain phosphoserine binding enablesIBAPANTHER:PTN002751398|UniProtKB:O95104150520179 GO_CentralGO_REF:0000033
1 to 9 of 9 rows

PMID:22301074   PMID:30032202  



SCAF4
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13126,546,801 - 26,583,040 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3126,547,108 - 26,636,811 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3126,538,227 - 26,597,009 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03126,665,041 - 26,723,881 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3126,665,575 - 26,756,253 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13126,610,942 - 26,669,751 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03126,622,773 - 26,681,555 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03127,129,000 - 27,187,809 (-)NCBIUU_Cfam_GSD_1.0
SCAF4
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382131,671,000 - 31,732,118 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2131,671,000 - 31,732,118 (-)EnsemblGRCh38hg38GRCh38
GRCh372133,043,313 - 33,104,431 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362131,965,416 - 32,026,133 (-)NCBINCBI36Build 36hg18NCBI36
Celera2118,226,630 - 18,287,746 (-)NCBICelera
Cytogenetic Map21q22.11NCBI
HuRef2118,453,341 - 18,514,530 (-)NCBIHuRef
CHM1_12132,605,296 - 32,666,386 (-)NCBICHM1_1
T2T-CHM13v2.02130,038,984 - 30,100,110 (-)NCBIT2T-CHM13v2.0
Scaf4
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391690,021,504 - 90,082,074 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1690,022,568 - 90,081,391 (-)EnsemblGRCm39 Ensembl
GRCm381690,228,950 - 90,286,140 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1690,225,680 - 90,284,503 (-)EnsemblGRCm38mm10GRCm38
MGSCv371690,229,384 - 90,284,670 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361690,229,384 - 90,284,670 (-)NCBIMGSCv36mm8
Celera1690,424,774 - 90,479,985 (-)NCBICelera
Cytogenetic Map16C3.3NCBI
cM Map1651.57NCBI
Scaf4
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81142,951,254 - 43,007,293 (-)NCBIGRCr8
mRatBN7.21129,460,479 - 29,521,153 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1129,465,106 - 29,521,153 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1138,153,091 - 38,209,037 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01130,824,482 - 30,880,426 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01130,013,841 - 30,069,810 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01130,371,713 - 30,428,073 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1130,371,713 - 30,428,073 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01133,987,199 - 34,047,580 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41129,751,872 - 29,807,911 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11129,751,869 - 29,807,911 (+)NCBI
Celera1129,152,167 - 29,208,170 (-)NCBICelera
Cytogenetic Map11q11NCBI
Scaf4
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540731,270,035 - 31,303,823 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495540731,269,673 - 31,303,823 (-)NCBIChiLan1.0ChiLan1.0
SCAF4
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22227,790,329 - 27,852,175 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12122,649,978 - 22,711,795 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02118,039,507 - 18,101,700 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12131,421,160 - 31,482,543 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2131,421,160 - 31,482,543 (-)Ensemblpanpan1.1panPan2
Scaf4
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440497127,123,792 - 27,168,322 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493650010,307,835 - 10,342,588 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493650010,307,868 - 10,342,952 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SCAF4
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl13195,333,260 - 195,396,204 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.113195,335,178 - 195,396,246 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.213205,632,094 - 205,690,676 (-)NCBISscrofa10.2Sscrofa10.2susScr3
SCAF4
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1260,397,173 - 60,459,295 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl260,397,233 - 60,458,553 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660712,938,854 - 3,002,480 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Scaf4
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474520,040,770 - 20,097,835 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462474520,040,416 - 20,097,764 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

.

.
Variants in SCAF4
305 total Variants



adipose tissue
alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
reproductive system
respiratory system
6 5 5 23 22 16 6 6 6 6 33 22 12 14 10


1 to 22 of 22 rows
RefSeq Transcripts XM_022413257 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022413258 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038443338 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038443340 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038443341 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038461746 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038461747 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038461748 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038517757 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038517758 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038517759 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038581333 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038581334 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038581335 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038645715 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038645716 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038645717 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000031 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000317 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000076 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000279 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000031 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
1 to 22 of 22 rows

Ensembl Acc Id: ENSCAFT00000014079   ⟹   ENSCAFP00000013024
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl3126,547,108 - 26,582,975 (-)Ensembl
Ensembl Acc Id: ENSCAFT00000069498   ⟹   ENSCAFP00000045901
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl3126,547,108 - 26,604,466 (-)Ensembl
Ensembl Acc Id: ENSCAFT00000073147   ⟹   ENSCAFP00000047335
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl3126,547,108 - 26,636,811 (-)Ensembl
Ensembl Acc Id: ENSCAFT00000086503   ⟹   ENSCAFP00000064136
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl3126,547,108 - 26,604,466 (-)Ensembl
Ensembl Acc Id: ENSCAFT00845040724   ⟹   ENSCAFP00845031878
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl3126,665,575 - 26,756,253 (-)Ensembl
Ensembl Acc Id: ENSCAFT00845040857   ⟹   ENSCAFP00845031992
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl3126,665,575 - 26,710,035 (-)Ensembl
Ensembl Acc Id: ENSCAFT00845041001   ⟹   ENSCAFP00845032122
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl3126,665,770 - 26,725,047 (-)Ensembl
Ensembl Acc Id: ENSCAFT00845041169   ⟹   ENSCAFP00845032265
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl3126,665,770 - 26,725,047 (-)Ensembl
Ensembl Acc Id: ENSCAFT00845041509   ⟹   ENSCAFP00845032542
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl3126,665,770 - 26,723,885 (-)Ensembl
RefSeq Acc Id: XM_038443338   ⟹   XP_038299266
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.03126,665,041 - 26,723,881 (-)NCBI
RefSeq Acc Id: XM_038443340   ⟹   XP_038299268
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.03126,665,041 - 26,701,962 (-)NCBI
RefSeq Acc Id: XM_038443341   ⟹   XP_038299269
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.03126,665,041 - 26,723,881 (-)NCBI
RefSeq Acc Id: XM_038461746   ⟹   XP_038317674
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha3126,538,227 - 26,597,009 (-)NCBI
RefSeq Acc Id: XM_038461747   ⟹   XP_038317675
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha3126,538,227 - 26,575,122 (-)NCBI
RefSeq Acc Id: XM_038461748   ⟹   XP_038317676
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha3126,538,227 - 26,597,009 (-)NCBI
RefSeq Acc Id: XM_038517757   ⟹   XP_038373685
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.13126,610,942 - 26,669,751 (-)NCBI
RefSeq Acc Id: XM_038517758   ⟹   XP_038373686
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.13126,610,942 - 26,647,826 (-)NCBI
RefSeq Acc Id: XM_038517759   ⟹   XP_038373687
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.13126,610,942 - 26,669,751 (-)NCBI
RefSeq Acc Id: XM_038581333   ⟹   XP_038437261
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.03127,129,000 - 27,187,809 (-)NCBI
RefSeq Acc Id: XM_038581334   ⟹   XP_038437262
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.03127,129,000 - 27,165,883 (-)NCBI
RefSeq Acc Id: XM_038581335   ⟹   XP_038437263
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.03127,129,000 - 27,187,809 (-)NCBI
RefSeq Acc Id: XM_038645715   ⟹   XP_038501643
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.03126,622,773 - 26,681,555 (-)NCBI
RefSeq Acc Id: XM_038645716   ⟹   XP_038501644
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.03126,622,773 - 26,659,653 (-)NCBI
RefSeq Acc Id: XM_038645717   ⟹   XP_038501645
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.03126,622,773 - 26,681,555 (-)NCBI
1 to 5 of 24 rows
1 to 5 of 24 rows
Ensembl Acc Id: ENSCAFP00000045901   ⟸   ENSCAFT00000069498
Ensembl Acc Id: ENSCAFP00000013024   ⟸   ENSCAFT00000014079
Ensembl Acc Id: ENSCAFP00000047335   ⟸   ENSCAFT00000073147
Ensembl Acc Id: ENSCAFP00000064136   ⟸   ENSCAFT00000086503
RefSeq Acc Id: XP_038373687   ⟸   XM_038517759
- Peptide Label: isoform X3
CID   RRM



1 to 40 of 50 rows
Database
Acc Id
Source(s)
Ensembl Genes ENSCAFG00000008863 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00030013191 UniProtKB/TrEMBL
  ENSCAFG00040024601 UniProtKB/TrEMBL
  ENSCAFG00845023056 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000014079.6 UniProtKB/TrEMBL
  ENSCAFT00000069498.2 UniProtKB/TrEMBL
  ENSCAFT00000073147.2 UniProtKB/TrEMBL
  ENSCAFT00000086503.2 UniProtKB/TrEMBL
  ENSCAFT00000099413.1 UniProtKB/TrEMBL
  ENSCAFT00030024570.1 UniProtKB/TrEMBL
  ENSCAFT00040045866.1 UniProtKB/TrEMBL
  ENSCAFT00845040724 ENTREZGENE
  ENSCAFT00845040724.1 UniProtKB/TrEMBL
  ENSCAFT00845040857.1 UniProtKB/TrEMBL
  ENSCAFT00845041001 ENTREZGENE
  ENSCAFT00845041001.1 UniProtKB/TrEMBL
  ENSCAFT00845041169.1 UniProtKB/TrEMBL
  ENSCAFT00845041509.1 UniProtKB/TrEMBL
Gene3D-CATH 1.25.40.90 UniProtKB/TrEMBL
  3.30.70.330 UniProtKB/TrEMBL
InterPro CID_dom UniProtKB/TrEMBL
  ENTH_VHS UniProtKB/TrEMBL
  Nucleotide-bd_a/b_plait_sf UniProtKB/TrEMBL
  RBD_domain_sf UniProtKB/TrEMBL
  RRM_dom UniProtKB/TrEMBL
  SCAF4_RRM UniProtKB/TrEMBL
  SR-CTD_assoc_factor UniProtKB/TrEMBL
NCBI Gene SCAF4 ENTREZGENE
PANTHER RNA PROCESSING PROTEIN LD23810P UniProtKB/TrEMBL
  SR-RELATED AND CTD-ASSOCIATED FACTOR 4 UniProtKB/TrEMBL
Pfam CID UniProtKB/TrEMBL
  RRM_1 UniProtKB/TrEMBL
PRINTS PRICHEXTENSN UniProtKB/TrEMBL
PROSITE CID UniProtKB/TrEMBL
  RRM UniProtKB/TrEMBL
SMART RPR UniProtKB/TrEMBL
  RRM UniProtKB/TrEMBL
Superfamily-SCOP SSF48464 UniProtKB/TrEMBL
  SSF54928 UniProtKB/TrEMBL
UniProt A0A8C0TT91_CANLF UniProtKB/TrEMBL
1 to 40 of 50 rows