ZNF703 (zinc finger protein 703) - Rat Genome Database

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Gene: ZNF703 (zinc finger protein 703) Canis lupus familiaris
Analyze
Symbol: ZNF703
Name: zinc finger protein 703
RGD ID: 12064193
Description: ENCODES a protein that exhibits DNA-binding transcription factor binding (inferred); metal ion binding (inferred); INVOLVED IN adherens junction assembly (inferred); cellular response to estradiol stimulus (inferred); mammary gland epithelial cell differentiation (inferred); ASSOCIATED WITH genetic disease (ortholog); FOUND IN cytoplasm (inferred); nuclear matrix (inferred); nucleus (inferred)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11627,669,506 - 27,673,732 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1627,670,897 - 27,673,803 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1628,186,221 - 28,190,501 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01629,568,710 - 29,572,990 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1629,568,721 - 29,588,889 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11627,790,090 - 27,794,370 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01628,367,780 - 28,372,070 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01628,406,977 - 28,411,257 (-)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
ZNF703
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11627,669,506 - 27,673,732 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1627,670,897 - 27,673,803 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1628,186,221 - 28,190,501 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01629,568,710 - 29,572,990 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1629,568,721 - 29,588,889 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11627,790,090 - 27,794,370 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01628,367,780 - 28,372,070 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01628,406,977 - 28,411,257 (-)NCBIUU_Cfam_GSD_1.0
ZNF703
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38837,695,782 - 37,700,019 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl837,695,782 - 37,700,019 (+)EnsemblGRCh38hg38GRCh38
GRCh37837,553,300 - 37,557,537 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36837,672,459 - 37,675,554 (+)NCBINCBI36Build 36hg18NCBI36
Celera836,506,270 - 36,509,365 (+)NCBICelera
Cytogenetic Map8p11.23NCBI
HuRef836,088,055 - 36,091,097 (+)NCBIHuRef
CHM1_1837,754,737 - 37,757,832 (+)NCBICHM1_1
T2T-CHM13v2.0837,972,157 - 37,976,394 (+)NCBIT2T-CHM13v2.0
Zfp703
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39827,467,364 - 27,471,490 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl827,467,353 - 27,471,489 (+)EnsemblGRCm39 Ensembl
GRCm38826,977,336 - 26,981,462 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl826,977,325 - 26,981,461 (+)EnsemblGRCm38mm10GRCm38
MGSCv37828,087,808 - 28,091,934 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36828,441,489 - 28,447,402 (+)NCBIMGSCv36mm8
Celera828,466,249 - 28,470,375 (+)NCBICelera
Cytogenetic Map8A2NCBI
cM Map815.91NCBI
Zfp703
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81671,779,340 - 71,783,510 (-)NCBIGRCr8
mRatBN7.21665,076,507 - 65,080,677 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1665,076,507 - 65,080,677 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1670,359,975 - 70,364,169 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01673,766,303 - 73,770,497 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01669,011,894 - 69,016,064 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01669,237,857 - 69,242,028 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1669,237,857 - 69,242,028 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01668,911,230 - 68,915,401 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41669,405,004 - 69,409,137 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1662,995,876 - 63,000,045 (-)NCBICelera
Cytogenetic Map16q12.3NCBI
Znf703
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495546313,407,491 - 13,411,562 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495546313,407,491 - 13,411,562 (+)NCBIChiLan1.0ChiLan1.0
ZNF703
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2756,254,453 - 56,259,044 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1831,971,878 - 31,976,120 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0836,994,222 - 36,998,462 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1834,172,354 - 34,185,140 (+)NCBIpanpan1.1PanPan1.1panPan2
Znf703
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494350,302,241 - 50,306,207 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049367101,155,006 - 1,158,974 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049367101,155,007 - 1,158,972 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ZNF703
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1548,692,320 - 48,696,644 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11548,692,316 - 48,696,639 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21555,809,369 - 55,813,713 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ZNF703
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1835,730,678 - 35,735,015 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl835,730,736 - 35,737,788 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660526,270,025 - 6,274,311 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Znf703
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247805,895,998 - 5,900,367 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247805,896,424 - 5,900,425 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in ZNF703
65 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium 5 4 4 3 6 6 6
Low 1 17 5 3 5 12 10
Below cutoff 1 1 1 8

Sequence


RefSeq Acc Id: ENSCAFT00000010058   ⟹   ENSCAFP00000009330
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1627,670,897 - 27,673,803 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845024681   ⟹   ENSCAFP00845019425
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1629,568,721 - 29,588,889 (-)Ensembl
RefSeq Acc Id: XM_038497641   ⟹   XP_038353569
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11627,790,090 - 27,794,370 (-)NCBI
RefSeq Acc Id: XM_038560117   ⟹   XP_038416045
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01628,406,977 - 28,411,257 (-)NCBI
RefSeq Acc Id: XM_038624164   ⟹   XP_038480092
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01628,367,780 - 28,372,070 (-)NCBI
RefSeq Acc Id: XM_038689917   ⟹   XP_038545845
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01629,568,710 - 29,572,990 (-)NCBI
RefSeq Acc Id: XM_843953   ⟹   XP_849046
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11627,669,506 - 27,673,732 (-)NCBI
Dog10K_Boxer_Tasha1628,186,221 - 28,190,501 (-)NCBI
Sequence:
RefSeq Acc Id: XP_849046   ⟸   XM_843953
- UniProtKB: A0A8C0QTH1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCAFP00000009330   ⟸   ENSCAFT00000010058
RefSeq Acc Id: XP_038353569   ⟸   XM_038497641
RefSeq Acc Id: XP_038480092   ⟸   XM_038624164
RefSeq Acc Id: XP_038545845   ⟸   XM_038689917
- UniProtKB: A0A8C0QTH1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038416045   ⟸   XM_038560117
- UniProtKB: A0A8C0QTH1 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSCAFP00845019425   ⟸   ENSCAFT00845024681
Protein Domains
C2H2-type


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000006224 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00845013831 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000010058.6 UniProtKB/TrEMBL
  ENSCAFT00845024681.1 UniProtKB/TrEMBL
Gene3D-CATH Classic Zinc Finger UniProtKB/TrEMBL
InterPro Tscrpt_rep_NocA-like UniProtKB/TrEMBL
  Znf_C2H2_type UniProtKB/TrEMBL
NCBI Gene ZNF703 ENTREZGENE
PANTHER ZINC FINGER PROTEIN 703 UniProtKB/TrEMBL
  ZINC-FINGER PROTEIN NOLZ1-RELATED UniProtKB/TrEMBL
Pfam nlz1 UniProtKB/TrEMBL
PROSITE ZINC_FINGER_C2H2_2 UniProtKB/TrEMBL
UniProt A0A8C0QTH1 ENTREZGENE
  A0A8I3NFQ0_CANLF UniProtKB/TrEMBL
  A0A8P0N8P4_CANLF UniProtKB/TrEMBL
VGNC ID VGNC:48802 ENTREZGENE