IL23R (interleukin 23 receptor) - Rat Genome Database

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Gene: IL23R (interleukin 23 receptor) Pan paniscus
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Symbol: IL23R
Name: interleukin 23 receptor
RGD ID: 12023890
Description: ENCODES a protein that exhibits interleukin-12 receptor binding (ortholog); interleukin-23 binding (ortholog); interleukin-23 receptor activity (ortholog); INVOLVED IN interleukin-23-mediated signaling pathway (inferred); negative regulation of interleukin-10 production (inferred); positive regulation of defense response to virus by host (inferred); PARTICIPATES IN interleukin-23 signaling pathway; ASSOCIATED WITH ankylosing spondylitis (ortholog); arthritis (ortholog); asthma (ortholog); FOUND IN cell surface (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: interleukin-23 receptor
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21159,561,801 - 159,727,876 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11158,721,629 - 158,887,710 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0166,408,839 - 66,502,535 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1168,293,514 - 68,386,815 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl168,293,514 - 68,386,815 (+)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:22301074  


Genomics

Comparative Map Data
IL23R
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21159,561,801 - 159,727,876 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11158,721,629 - 158,887,710 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0166,408,839 - 66,502,535 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1168,293,514 - 68,386,815 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl168,293,514 - 68,386,815 (+)Ensemblpanpan1.1panPan2
IL23R
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38167,138,637 - 67,265,903 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl167,138,907 - 67,259,979 (+)EnsemblGRCh38hg38GRCh38
GRCh37167,632,137 - 67,725,662 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36167,404,757 - 67,498,250 (+)NCBINCBI36Build 36hg18NCBI36
Build 34167,344,189 - 67,437,669NCBI
Celera165,922,104 - 66,015,428 (+)NCBICelera
Cytogenetic Map1p31.3NCBI
HuRef165,740,552 - 65,835,548 (+)NCBIHuRef
CHM1_1167,747,479 - 67,841,006 (+)NCBICHM1_1
T2T-CHM13v2.0167,016,149 - 67,143,448 (+)NCBIT2T-CHM13v2.0
Il23r
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39667,399,906 - 67,468,838 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl667,399,916 - 67,468,839 (-)EnsemblGRCm39 Ensembl
GRCm38667,422,932 - 67,491,855 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl667,422,932 - 67,491,855 (-)EnsemblGRCm38mm10GRCm38
MGSCv37667,372,926 - 67,441,849 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36667,352,510 - 67,421,433 (-)NCBIMGSCv36mm8
Celera669,541,500 - 69,610,484 (-)NCBICelera
Cytogenetic Map6C1NCBI
cM Map630.85NCBI
Il23r
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8497,910,230 - 98,003,759 (-)NCBIGRCr8
mRatBN7.2496,580,568 - 96,672,540 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl496,580,714 - 96,674,021 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.0498,203,788 - 98,306,729 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl498,203,958 - 98,305,173 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04162,989,461 - 163,092,313 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.04163,191,096 - 163,200,531 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4497,087,580 - 97,768,978 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera491,260,435 - 91,346,771 (-)NCBICelera
Cytogenetic Map4q31NCBI
Il23r
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542323,842,475 - 23,884,904 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495542323,841,342 - 23,885,191 (-)NCBIChiLan1.0ChiLan1.0
IL23R
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1543,307,422 - 43,369,806 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl543,308,982 - 43,368,474 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha543,492,672 - 43,558,098 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0543,489,715 - 43,555,184 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl543,494,316 - 43,555,221 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1543,455,682 - 43,521,106 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0543,402,563 - 43,468,018 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0543,641,801 - 43,707,245 (-)NCBIUU_Cfam_GSD_1.0
Il23r
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505880,065,633 - 80,123,951 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365914,365,762 - 4,425,005 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365914,365,598 - 4,425,053 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
IL23R
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl6145,335,741 - 145,401,510 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.16145,337,765 - 145,401,909 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.26134,219,683 - 134,283,706 (-)NCBISscrofa10.2Sscrofa10.2susScr3
IL23R
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12065,853,379 - 65,946,000 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2065,854,349 - 65,938,024 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603351,655,750 - 51,751,460 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Il23r
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474227,901,071 - 27,941,109 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462474227,899,934 - 27,954,145 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSPPAT00000021745   ⟹   ENSPPAP00000004750
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl168,293,514 - 68,386,815 (+)Ensembl
RefSeq Acc Id: XM_055117522   ⟹   XP_054973497
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21159,607,646 - 159,727,876 (-)NCBI
NHGRI_mPanPan11158,767,481 - 158,887,710 (-)NCBI
RefSeq Acc Id: XM_057298598   ⟹   XP_057154581
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21159,607,646 - 159,700,379 (-)NCBI
NHGRI_mPanPan11158,767,481 - 158,860,252 (-)NCBI
RefSeq Acc Id: XR_008626632
Type: NON-CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21159,594,715 - 159,727,669 (-)NCBI
NHGRI_mPanPan11158,754,552 - 158,887,503 (-)NCBI
RefSeq Acc Id: XR_008626633
Type: NON-CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21159,561,801 - 159,727,669 (-)NCBI
NHGRI_mPanPan11158,721,629 - 158,887,503 (-)NCBI
RefSeq Acc Id: XR_008626634
Type: NON-CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21159,561,808 - 159,727,669 (-)NCBI
NHGRI_mPanPan11158,721,636 - 158,887,503 (-)NCBI
Protein Sequences
Protein RefSeqs XP_054973497 (Get FASTA)   NCBI Sequence Viewer  
  XP_057154581 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000004750.1
Ensembl Acc Id: ENSPPAP00000004750   ⟸   ENSPPAT00000021745
RefSeq Acc Id: XP_054973497   ⟸   XM_055117522
- UniProtKB: A0A2R8ZPL6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_057154581   ⟸   XM_057298598
- UniProtKB: A0A2R8ZPL6 (UniProtKB/TrEMBL)
Protein Domains
Fibronectin type-III


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000019836 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000021745.1 UniProtKB/TrEMBL
Gene3D-CATH 2.60.40.10 UniProtKB/TrEMBL
InterPro FN3_dom UniProtKB/TrEMBL
  FN3_sf UniProtKB/TrEMBL
  Ig-like_fold UniProtKB/TrEMBL
  Type1_Cytokine_Rcpt_Type2 UniProtKB/TrEMBL
KEGG Report pps:100980904 UniProtKB/TrEMBL
NCBI Gene IL23R ENTREZGENE
PANTHER INTERLEUKIN-27 RECEPTOR SUBUNIT ALPHA UniProtKB/TrEMBL
  INTERLEUKIN-27 RECEPTOR SUBUNIT ALPHA UniProtKB/TrEMBL
PROSITE FN3 UniProtKB/TrEMBL
Superfamily-SCOP SSF49265 UniProtKB/TrEMBL
UniProt A0A2R8ZPL6 ENTREZGENE, UniProtKB/TrEMBL