GAK (cyclin G associated kinase) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: GAK (cyclin G associated kinase) Pan paniscus
Analyze
Symbol: GAK
Name: cyclin G associated kinase
RGD ID: 11955975
Description: ENCODES a protein that exhibits cyclin binding (ortholog); INVOLVED IN clathrin coat disassembly (ortholog); clathrin-dependent endocytosis (ortholog); endoplasmic reticulum organization (ortholog); ASSOCIATED WITH cherubism (ortholog); Mental Retardation, Autosomal Recessive 53 (ortholog); mucopolysaccharidosis I (ortholog); FOUND IN cytosol (inferred); Golgi apparatus (inferred); intracellular membrane-bounded organelle (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: cyclin-G-associated kinase
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.14883,096 - 967,473 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl4883,096 - 967,473 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v04952,474 - 1,049,612 (-)NCBIMhudiblu_PPA_v0panPan3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

References

Genomics

Comparative Map Data
GAK
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.14883,096 - 967,473 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl4883,096 - 967,473 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v04952,474 - 1,049,612 (-)NCBIMhudiblu_PPA_v0panPan3
GAK
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh384849,277 - 932,316 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl4849,276 - 932,373 (-)EnsemblGRCh38hg38GRCh38
GRCh374843,065 - 926,104 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 364833,065 - 916,174 (-)NCBINCBI36hg18NCBI36
Build 344832,895 - 915,805NCBI
Celera4750,124 - 863,080 (-)NCBI
Cytogenetic Map4p16.3NCBI
HuRef4813,547 - 897,389 (-)NCBIHuRef
CHM1_14842,855 - 925,384 (-)NCBICHM1_1
T2T-CHM13v2.04847,030 - 930,388 (-)NCBI
Gak
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm395108,716,973 - 108,777,643 (-)NCBIGRCm39mm39
GRCm39 Ensembl5108,717,277 - 108,777,621 (-)Ensembl
GRCm385108,569,107 - 108,629,777 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl5108,569,411 - 108,629,755 (-)EnsemblGRCm38mm10GRCm38
MGSCv375108,998,433 - 109,058,758 (-)NCBIGRCm37mm9NCBIm37
MGSCv365108,809,716 - 108,870,041 (-)NCBImm8
Celera5105,690,922 - 105,751,237 (-)NCBICelera
Cytogenetic Map5FNCBI
Gak
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2141,089,853 - 1,164,098 (+)NCBImRatBN7.2
mRatBN7.2 Ensembl141,089,866 - 1,216,398 (+)Ensembl
Rnor_6.0142,100,104 - 2,174,332 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl142,100,106 - 2,174,318 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0142,095,637 - 2,168,946 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4141,630,890 - 1,710,373 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1141,630,889 - 1,710,373 (+)NCBI
Celera141,129,213 - 1,203,494 (+)NCBICelera
Cytogenetic Map14p22NCBI
Gak
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955514387,179 - 434,077 (-)EnsemblChiLan1.0
ChiLan1.0NW_004955514391,305 - 434,198 (-)NCBIChiLan1.0ChiLan1.0
GAK
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1391,575,537 - 91,630,715 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl391,574,751 - 91,630,663 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha394,040,859 - 94,095,630 (+)NCBI
ROS_Cfam_1.0392,574,135 - 92,629,637 (+)NCBI
ROS_Cfam_1.0 Ensembl392,573,478 - 92,631,424 (+)Ensembl
UMICH_Zoey_3.1391,745,453 - 91,800,982 (+)NCBI
UNSW_CanFamBas_1.0391,799,161 - 91,854,620 (+)NCBI
UU_Cfam_GSD_1.0392,183,004 - 92,238,533 (+)NCBI
Gak
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440528568,552,411 - 68,599,133 (+)NCBI
SpeTri2.0NW_00493647722,254,109 - 22,300,827 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GAK
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl8240,821 - 296,958 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.18240,818 - 296,989 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.28322 - 23,682 (+)NCBISscrofa10.2Sscrofa10.2susScr3
GAK
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12747,852,548 - 47,935,691 (+)NCBIChlSab1.1chlSab2
ChlSab1.1 Ensembl2747,852,588 - 47,935,874 (+)EnsemblChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660514,214,320 - 4,318,135 (+)NCBIVero_WHO_p1.0
Gak
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475526,208,334 - 26,250,533 (+)EnsemblHetGla_female_1.0hetGla2
HetGla 1.0NW_00462475526,208,207 - 26,250,937 (+)NCBIHetGla_female_1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSPPAT00000037935   ⟹   ENSPPAP00000015245
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl4883,096 - 967,473 (-)Ensembl
RefSeq Acc Id: ENSPPAT00000037945   ⟹   ENSPPAP00000015255
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl4883,493 - 967,272 (-)Ensembl
RefSeq Acc Id: ENSPPAT00000037949   ⟹   ENSPPAP00000015259
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl4883,493 - 967,272 (-)Ensembl
RefSeq Acc Id: ENSPPAT00000037961   ⟹   ENSPPAP00000015271
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl4883,493 - 967,272 (-)Ensembl
RefSeq Acc Id: ENSPPAT00000037970   ⟹   ENSPPAP00000015280
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl4883,493 - 967,272 (-)Ensembl
RefSeq Acc Id: ENSPPAT00000037975   ⟹   ENSPPAP00000015285
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl4944,248 - 967,272 (-)Ensembl
RefSeq Acc Id: XM_003811302   ⟹   XP_003811350
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.14883,096 - 967,473 (-)NCBI
Mhudiblu_PPA_v04952,474 - 1,049,578 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008963712   ⟹   XP_008961960
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.14883,096 - 967,473 (-)NCBI
Mhudiblu_PPA_v04952,474 - 1,049,578 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008963713   ⟹   XP_008961961
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.14883,096 - 967,473 (-)NCBI
Mhudiblu_PPA_v04952,474 - 1,049,578 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008963714   ⟹   XP_008961962
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.14883,096 - 967,473 (-)NCBI
Mhudiblu_PPA_v04952,474 - 1,049,578 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008963716   ⟹   XP_008961964
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.14883,096 - 967,473 (-)NCBI
Mhudiblu_PPA_v04952,474 - 1,049,578 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008963718   ⟹   XP_008961966
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.14885,294 - 967,473 (-)NCBI
Mhudiblu_PPA_v04954,672 - 1,049,578 (-)NCBI
Sequence:
RefSeq Acc Id: XM_034958111   ⟹   XP_034814002
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v04952,474 - 1,049,578 (-)NCBI
RefSeq Acc Id: XM_034958112   ⟹   XP_034814003
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v04952,474 - 1,049,578 (-)NCBI
RefSeq Acc Id: XM_034958113   ⟹   XP_034814004
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v04952,474 - 1,049,612 (-)NCBI
RefSeq Acc Id: XM_034958114   ⟹   XP_034814005
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v04952,474 - 1,049,578 (-)NCBI
RefSeq Acc Id: XM_034958115   ⟹   XP_034814006
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v04961,943 - 1,049,578 (-)NCBI
RefSeq Acc Id: XM_034958116   ⟹   XP_034814007
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v04952,474 - 1,049,578 (-)NCBI
Reference Sequences
RefSeq Acc Id: XP_008961962   ⟸   XM_008963714
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_008961961   ⟸   XM_008963713
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_008961964   ⟸   XM_008963716
- Peptide Label: isoform X7
- Sequence:
RefSeq Acc Id: XP_003811350   ⟸   XM_003811302
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_008961960   ⟸   XM_008963712
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_008961966   ⟸   XM_008963718
- Peptide Label: isoform X9
- Sequence:
RefSeq Acc Id: XP_034814004   ⟸   XM_034958113
- Peptide Label: isoform X8
RefSeq Acc Id: XP_034814003   ⟸   XM_034958112
- Peptide Label: isoform X6
RefSeq Acc Id: XP_034814007   ⟸   XM_034958116
- Peptide Label: isoform X12
RefSeq Acc Id: XP_034814005   ⟸   XM_034958114
- Peptide Label: isoform X10
RefSeq Acc Id: XP_034814002   ⟸   XM_034958111
- Peptide Label: isoform X4
RefSeq Acc Id: XP_034814006   ⟸   XM_034958115
- Peptide Label: isoform X11
RefSeq Acc Id: ENSPPAP00000015259   ⟸   ENSPPAT00000037949
RefSeq Acc Id: ENSPPAP00000015255   ⟸   ENSPPAT00000037945
RefSeq Acc Id: ENSPPAP00000015245   ⟸   ENSPPAT00000037935
RefSeq Acc Id: ENSPPAP00000015285   ⟸   ENSPPAT00000037975
RefSeq Acc Id: ENSPPAP00000015280   ⟸   ENSPPAT00000037970
RefSeq Acc Id: ENSPPAP00000015271   ⟸   ENSPPAT00000037961

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000030635 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSPPAP00000015245 ENTREZGENE, UniProtKB/TrEMBL
  ENSPPAP00000015255 UniProtKB/TrEMBL
  ENSPPAP00000015259 UniProtKB/TrEMBL
  ENSPPAP00000015271 UniProtKB/TrEMBL
  ENSPPAP00000015280 UniProtKB/TrEMBL
  ENSPPAP00000015285 UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000037935 UniProtKB/TrEMBL
  ENSPPAT00000037945 UniProtKB/TrEMBL
  ENSPPAT00000037949 UniProtKB/TrEMBL
  ENSPPAT00000037961 UniProtKB/TrEMBL
  ENSPPAT00000037970 UniProtKB/TrEMBL
  ENSPPAT00000037975 UniProtKB/TrEMBL
Gene3D-CATH 1.10.287.110 UniProtKB/TrEMBL
  3.90.190.10 UniProtKB/TrEMBL
InterPro C2_domain_sf UniProtKB/TrEMBL
  DnaJ_domain UniProtKB/TrEMBL
  J_dom_sf UniProtKB/TrEMBL
  Kinase-like_dom_sf UniProtKB/TrEMBL
  Prot-tyrosine_phosphatase-like UniProtKB/TrEMBL
  Prot_kinase_dom UniProtKB/TrEMBL
  Ser/Thr_kinase_AS UniProtKB/TrEMBL
  Tensin_C2-dom UniProtKB/TrEMBL
  Tensin_phosphatase UniProtKB/TrEMBL
KEGG Report pps:100981497 UniProtKB/TrEMBL
NCBI Gene GAK ENTREZGENE
Pfam DnaJ UniProtKB/TrEMBL
  Pkinase UniProtKB/TrEMBL
  PTEN_C2 UniProtKB/TrEMBL
PROSITE C2_TENSIN UniProtKB/TrEMBL
  DNAJ_2 UniProtKB/TrEMBL
  PPASE_TENSIN UniProtKB/TrEMBL
  PROTEIN_KINASE_DOM UniProtKB/TrEMBL
  PROTEIN_KINASE_ST UniProtKB/TrEMBL
SMART DnaJ UniProtKB/TrEMBL
  PTEN_C2 UniProtKB/TrEMBL
  S_TKc UniProtKB/TrEMBL
Superfamily-SCOP SSF46565 UniProtKB/TrEMBL
  SSF49562 UniProtKB/TrEMBL
  SSF52799 UniProtKB/TrEMBL
  SSF56112 UniProtKB/TrEMBL
UniProt A0A2R9AD78_PANPA UniProtKB/TrEMBL
  A0A2R9AD98_PANPA UniProtKB/TrEMBL
  A0A2R9ADB0_PANPA UniProtKB/TrEMBL
  A0A2R9ADD6_PANPA UniProtKB/TrEMBL
  A0A2R9ADD9_PANPA UniProtKB/TrEMBL
  A0A2R9AEA7_PANPA UniProtKB/TrEMBL