ADRA1B (adrenoceptor alpha 1B) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: ADRA1B (adrenoceptor alpha 1B) Pan paniscus
Analyze
Symbol: ADRA1B
Name: adrenoceptor alpha 1B
RGD ID: 11913279
Description: ENCODES a protein that exhibits alpha1-adrenergic receptor activity (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN adult heart development (ortholog); behavioral response to cocaine (ortholog); blood vessel remodeling (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphaq family; ASSOCIATED WITH Cardiomegaly (ortholog); Experimental Liver Cirrhosis (ortholog); hyperinsulinism (ortholog); FOUND IN cytoplasm (ortholog); integral component of membrane (ortholog); intercalated disc (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: alpha-1B adrenergic receptor; LOC100970442
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.15161,923,708 - 161,954,901 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl5161,923,895 - 161,979,461 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v05155,307,148 - 155,363,785 (+)NCBIMhudiblu_PPA_v0panPan3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

Genomics

Comparative Map Data
ADRA1B
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.15161,923,708 - 161,954,901 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl5161,923,895 - 161,979,461 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v05155,307,148 - 155,363,785 (+)NCBIMhudiblu_PPA_v0panPan3
ADRA1B
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl5159,865,080 - 159,973,012 (+)EnsemblGRCh38hg38GRCh38
GRCh385159,916,482 - 159,989,205 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh375159,343,489 - 159,400,019 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 365159,276,318 - 159,332,595 (+)NCBINCBI36hg18NCBI36
Build 345159,276,317 - 159,332,129NCBI
Celera5155,374,535 - 155,430,824 (+)NCBI
Cytogenetic Map5q33.3NCBI
HuRef5154,438,201 - 154,494,477 (+)NCBIHuRef
CHM1_15158,776,756 - 158,833,023 (+)NCBICHM1_1
Adra1b
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391143,665,432 - 43,792,076 (-)NCBIGRCm39mm39
GRCm39 Ensembl1143,665,433 - 43,792,037 (-)Ensembl
GRCm381143,774,605 - 43,901,250 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1143,774,606 - 43,901,210 (-)EnsemblGRCm38mm10GRCm38
MGSCv371143,588,108 - 43,649,834 (-)NCBIGRCm37mm9NCBIm37
MGSCv361143,618,029 - 43,679,755 (-)NCBImm8
Celera1148,401,465 - 48,463,919 (-)NCBICelera
Cytogenetic Map11B1.1NCBI
cM Map1125.81NCBI
Adra1b
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21028,255,025 - 28,373,418 (-)NCBImRatBN7.2
mRatBN7.2 Ensembl1028,255,025 - 28,312,919 (-)Ensembl
Rnor_6.01029,392,762 - 29,450,644 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1029,392,762 - 29,450,644 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01029,233,972 - 29,291,344 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41028,889,092 - 28,946,889 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11028,890,140 - 28,947,938 (-)NCBI
Celera1027,744,674 - 27,802,198 (-)NCBICelera
Cytogenetic Map10q21NCBI
Adra1b
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540813,883,574 - 13,937,709 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495540813,883,574 - 13,937,798 (+)NCBIChiLan1.0ChiLan1.0
ADRA1B
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1450,676,816 - 50,724,999 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl450,677,255 - 50,724,999 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha450,570,905 - 50,619,105 (-)NCBI
ROS_Cfam_1.0451,111,625 - 51,159,868 (-)NCBI
UMICH_Zoey_3.1450,919,759 - 50,967,913 (-)NCBI
UNSW_CanFamBas_1.0451,043,059 - 51,091,264 (-)NCBI
UU_Cfam_GSD_1.0451,563,698 - 51,612,138 (-)NCBI
Adra1b
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024407213105,074,452 - 105,123,271 (-)NCBI
SpeTri2.0NW_0049365153,523,799 - 3,572,467 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ADRA1B
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1663,550,128 - 63,603,034 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11663,550,123 - 64,010,838 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21669,039,634 - 69,092,211 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ADRA1B
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12362,281,500 - 62,338,290 (+)NCBI
Vero_WHO_p1.0NW_02366603415,270,198 - 15,333,460 (-)NCBI
Adra1b
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462473329,545,870 - 29,661,954 (-)NCBI


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_034960903 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide SSBP01000195 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSPPAT00000060214   ⟹   ENSPPAP00000037314
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl5161,923,895 - 161,979,461 (+)Ensembl
RefSeq Acc Id: XM_034960903   ⟹   XP_034816794
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v05155,307,148 - 155,363,785 (+)NCBI
Protein Sequences
Protein RefSeqs XP_034816794 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_034816794   ⟸   XM_034960903
RefSeq Acc Id: ENSPPAP00000037314   ⟸   ENSPPAT00000060214


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000041419 Ensembl
NCBI Gene ADRA1B ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2020-06-11 ADRA1B  adrenoceptor alpha 1B  LOC100970442  alpha-1B adrenergic receptor  Data Merged 737654 PROVISIONAL