ADRA1B (adrenoceptor alpha 1B) - Rat Genome Database

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Gene: ADRA1B (adrenoceptor alpha 1B) Pan paniscus
Analyze
Symbol: ADRA1B
Name: adrenoceptor alpha 1B
RGD ID: 11913279
Description: ENCODES a protein that exhibits alpha1-adrenergic receptor activity (ortholog); INVOLVED IN adult heart development (ortholog); behavioral response to cocaine (ortholog); blood vessel remodeling (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphaq family; ASSOCIATED WITH Cardiomegaly (ortholog); Experimental Liver Cirrhosis (ortholog); hyperinsulinism (ortholog); FOUND IN intercalated disc (ortholog); T-tubule (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: alpha-1B adrenergic receptor; LOC100970442
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v24155,101,569 - 155,158,235 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan15153,241,121 - 153,297,783 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v05155,307,148 - 155,363,785 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.15161,923,708 - 161,954,901 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl5161,923,895 - 161,979,461 (+)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model



  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
ADRA1BBonoboCardiomegaly  ISOADRA1B (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:11278430 and PMID:11940550
ADRA1BBonoboExperimental Liver Cirrhosis  ISOADRA1B (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:25380136
ADRA1BBonoboHypotension  ISOADRA1B (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:11278430
ADRA1BBonobokidney disease  ISOADRA1B (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:18257748
ADRA1BBonoboNerve Degeneration  ISOADRA1B (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:12871582
ADRA1BBonobotoxic encephalopathy  ISOADRA1B (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:19125850


Biological Process
1 to 20 of 37 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
ADRA1BBonoboadenylate cyclase-activating adrenergic receptor signaling pathway involved_inIEAPANTHER:PTN008398674150520179 TreeGrafterGO_REF:0000118
ADRA1BBonoboadult heart development acts_upstream_of_or_withinISOMGI:1047739068941 PMID:12782680MGIPMID:12782680
ADRA1BBonobobehavioral response to cocaine acts_upstream_of_or_withinISOMGI:21486389068941 PMID:11923452MGIPMID:11923452
ADRA1BBonoboblood vessel remodeling acts_upstream_of_or_withinISOMGI:21486389068941 PMID:15231500MGIPMID:15231500
ADRA1BBonobocell growth involved in cardiac muscle cell development acts_upstream_of_or_withinISOMGI:1047739068941 PMID:12782680MGIPMID:12782680
ADRA1BBonobocell-cell signaling involved_inIEAPANTHER:PTN008398674150520179 TreeGrafterGO_REF:0000118
ADRA1BBonoboG protein-coupled receptor signaling pathway involved_inIEAUniProtKB-KW:KW-0297150520179 UniProtGO_REF:0000043
ADRA1BBonoboG protein-coupled receptor signaling pathway involved_inIEAARBA:ARBA00029021150520179 UniProtGO_REF:0000117
ADRA1BBonoboG protein-coupled receptor signaling pathway involved_inIEAInterPro:IPR000276 more ...150520179 InterProGO_REF:0000002
ADRA1BBonoboglucose homeostasis acts_upstream_of_or_withinISOMGI:21486389068941 PMID:14581480MGIPMID:14581480
ADRA1BBonoboglycogen catabolic process acts_upstream_ofISOMGI:21486389068941 PMID:14581480MGIPMID:14581480
ADRA1BBonobolocomotory behavior acts_upstream_of_or_withinISOMGI:21486389068941 PMID:11222061MGIPMID:11222061
ADRA1BBonobonegative regulation of glycogen catabolic process acts_upstream_of_or_withinISOMGI:21486389068941 PMID:14581480MGIPMID:14581480
ADRA1BBonobonegative regulation of Rho protein signal transduction acts_upstream_of_or_withinISOAdra1b (Rattus norvegicus)9068941PMID:18332105MGIPMID:18332105 and REF_RGD_ID:8554725
ADRA1BBonoboneuron-glial cell signaling involved_inISOUniProtKB:P97714 and UniProtKB:P977189068941 PMID:10493741ARUK-UCLPMID:10493741
ADRA1BBonoboorgan growth acts_upstream_of_or_withinISOMGI:1047739068941 PMID:12782680MGIPMID:12782680
ADRA1BBonobophospholipase C-activating G protein-coupled receptor signaling pathway involved_inIEAPANTHER:PTN008398674150520179 TreeGrafterGO_REF:0000118
ADRA1BBonobopositive regulation of cytosolic calcium ion concentration  ISOAdra1b (Rattus norvegicus)9068941 RGDPMID:12054611 and REF_RGD_ID:634393
ADRA1BBonobopositive regulation of cytosolic calcium ion concentration involved_inIEAPANTHER:PTN008398674150520179 TreeGrafterGO_REF:0000118
ADRA1BBonobopositive regulation of glycogen catabolic process acts_upstream_of_or_withinISOMGI:21486389068941 PMID:14581480MGIPMID:14581480
1 to 20 of 37 rows

Cellular Component
1 to 14 of 14 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
ADRA1BBonobocaveola located_inIEAUniProtKB-SubCell:SL-0035150520179 UniProtGO_REF:0000044
ADRA1BBonobocytoplasm located_inIEAUniProtKB-SubCell:SL-0086150520179 UniProtGO_REF:0000044
ADRA1BBonobocytoplasm located_inIEAUniProtKB:P35368 and ensembl:ENSP00000306662150520179 EnsemblGO_REF:0000107
ADRA1BBonobointercalated disc  ISOAdra1b (Rattus norvegicus)9068941 RGDPMID:18467629 and REF_RGD_ID:5688343
ADRA1BBonobomembrane located_inIEAInterPro:IPR000276 more ...150520179 InterProGO_REF:0000002
ADRA1BBonobomembrane located_inIEAUniProtKB-KW:KW-0472150520179 UniProtGO_REF:0000043
ADRA1BBonobonuclear membrane located_inIEAUniProtKB:P35368 and ensembl:ENSP00000306662150520179 EnsemblGO_REF:0000107
ADRA1BBonobonuclear membrane located_inIEAUniProtKB-SubCell:SL-0182150520179 UniProtGO_REF:0000044
ADRA1BBonobonucleus located_inIEAUniProtKB:P35368 and ensembl:ENSP00000306662150520179 EnsemblGO_REF:0000107
ADRA1BBonoboplasma membrane located_inIEAUniProtKB:P35368 and ensembl:ENSP00000306662150520179 EnsemblGO_REF:0000107
ADRA1BBonoboplasma membrane located_inIEAPANTHER:PTN008398674150520179 TreeGrafterGO_REF:0000118
ADRA1BBonoboplasma membrane located_inIEAUniProtKB-SubCell:SL-0039150520179 UniProtGO_REF:0000044
ADRA1BBonoboplasma membrane located_inIEAUniProtKB-KW:KW-1003150520179 UniProtGO_REF:0000043
ADRA1BBonoboT-tubule  ISOAdra1b (Rattus norvegicus)9068941 RGDPMID:18467629 and REF_RGD_ID:5688343
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Molecular Function
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1 to 9 of 9 rows

RGD Manual Annotations


  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
ADRA1BBonoboG protein mediated signaling pathway via Galphaq family  ISOADRA1B (Homo sapiens)9068941 RGDPMID:11454900 and REF_RGD_ID:1559318
PMID:22301074   PMID:30032202  



ADRA1B
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v24155,101,569 - 155,158,235 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan15153,241,121 - 153,297,783 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v05155,307,148 - 155,363,785 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.15161,923,708 - 161,954,901 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl5161,923,895 - 161,979,461 (+)Ensemblpanpan1.1panPan2
ADRA1B
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh385159,865,086 - 159,989,205 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl5159,865,080 - 159,973,012 (+)EnsemblGRCh38hg38GRCh38
GRCh375159,343,489 - 159,400,019 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 365159,276,318 - 159,332,595 (+)NCBINCBI36Build 36hg18NCBI36
Build 345159,276,317 - 159,332,129NCBI
Celera5155,374,535 - 155,430,824 (+)NCBICelera
Cytogenetic Map5q33.3NCBI
HuRef5154,438,201 - 154,494,477 (+)NCBIHuRef
CHM1_15158,776,756 - 158,833,023 (+)NCBICHM1_1
T2T-CHM13v2.05160,393,464 - 160,517,778 (+)NCBIT2T-CHM13v2.0
Adra1b
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391143,665,432 - 43,792,076 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1143,665,433 - 43,792,037 (-)EnsemblGRCm39 Ensembl
GRCm381143,774,605 - 43,901,250 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1143,774,606 - 43,901,210 (-)EnsemblGRCm38mm10GRCm38
MGSCv371143,588,108 - 43,649,834 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361143,618,029 - 43,679,755 (-)NCBIMGSCv36mm8
Celera1148,401,465 - 48,463,919 (-)NCBICelera
Cytogenetic Map11B1.1NCBI
cM Map1125.81NCBI
Adra1b
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81028,756,461 - 28,874,831 (-)NCBIGRCr8
mRatBN7.21028,255,025 - 28,373,418 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1028,255,025 - 28,312,919 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1033,014,641 - 33,072,459 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0101,553,026 - 1,610,850 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01027,985,197 - 28,043,019 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01029,392,762 - 29,450,644 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1029,392,762 - 29,450,644 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01029,233,972 - 29,291,344 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41028,889,092 - 28,946,889 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11028,890,140 - 28,947,938 (-)NCBI
Celera1027,744,674 - 27,802,198 (-)NCBICelera
Cytogenetic Map10q21NCBI
Adra1b
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540813,883,574 - 13,937,709 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495540813,883,574 - 13,937,798 (+)NCBIChiLan1.0ChiLan1.0
ADRA1B
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1450,676,816 - 50,724,999 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl450,677,255 - 50,724,999 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha450,570,905 - 50,619,105 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0451,111,625 - 51,159,868 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl451,111,625 - 51,159,868 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1450,919,759 - 50,967,913 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0451,043,059 - 51,091,264 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0451,563,698 - 51,612,138 (-)NCBIUU_Cfam_GSD_1.0
Adra1b
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024407213105,074,452 - 105,123,271 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365153,523,797 - 3,572,596 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365153,523,799 - 3,572,467 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ADRA1B
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1663,550,130 - 63,603,034 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11663,550,123 - 64,010,838 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21669,039,634 - 69,092,211 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ADRA1B
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12362,281,500 - 62,338,290 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366603415,270,198 - 15,333,460 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Adra1b
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473329,545,789 - 29,662,028 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473329,545,870 - 29,661,954 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

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RefSeq Transcripts XM_034960903 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JARIFH020000004 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSPPAT00000060214   ⟹   ENSPPAP00000037314
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl5161,923,895 - 161,979,461 (+)Ensembl
RefSeq Acc Id: XM_034960903   ⟹   XP_034816794
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v24155,101,569 - 155,158,235 (+)NCBI
NHGRI_mPanPan15153,241,121 - 153,297,783 (+)NCBI
Mhudiblu_PPA_v05155,307,148 - 155,363,785 (+)NCBI
Protein RefSeqs XP_034816794 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000037314.1
RefSeq Acc Id: XP_034816794   ⟸   XM_034960903
- UniProtKB: A0A2R9C696 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSPPAP00000037314   ⟸   ENSPPAT00000060214


1 to 19 of 19 rows
Database
Acc Id
Source(s)
Ensembl Genes ENSPPAG00000041419 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000060214.1 UniProtKB/TrEMBL
Gene3D-CATH Rhodopsin 7-helix transmembrane proteins UniProtKB/TrEMBL
InterPro ADR_fam UniProtKB/TrEMBL
  ADRA1B_rcpt UniProtKB/TrEMBL
  GPCR_Rhodpsn UniProtKB/TrEMBL
  GPCR_Rhodpsn_7TM UniProtKB/TrEMBL
NCBI Gene ADRA1B ENTREZGENE
PANTHER ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR UniProtKB/TrEMBL
  PTHR24248:SF17 UniProtKB/TrEMBL
Pfam 7tm_1 UniProtKB/TrEMBL
PRINTS ADRENERGICR UniProtKB/TrEMBL
  ADRENRGCA1BR UniProtKB/TrEMBL
  GPCRRHODOPSN UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F1_1 UniProtKB/TrEMBL
  G_PROTEIN_RECEP_F1_2 UniProtKB/TrEMBL
SMART 7TM_GPCR_Srsx UniProtKB/TrEMBL
Superfamily-SCOP Family A G protein-coupled receptor-like UniProtKB/TrEMBL
UniProt A0A2R9C696 ENTREZGENE, UniProtKB/TrEMBL
1 to 19 of 19 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2020-06-11 ADRA1B  adrenoceptor alpha 1B  LOC100970442  alpha-1B adrenergic receptor  Data merged from RGD:12047947 737654 PROVISIONAL