Symbol:
POLR3C
Name:
RNA polymerase III subunit C
RGD ID:
11910165
Description:
ENCODES a protein that exhibits DNA binding (inferred); single-stranded DNA binding (inferred); INVOLVED IN DNA-templated transcription (inferred); positive regulation of innate immune response (inferred); positive regulation of interferon-beta production (inferred); PARTICIPATES IN RNA polymerase III transcription pathway; ASSOCIATED WITH cataract 46 juvenile-onset (ortholog); gastrointestinal stromal tumor (ortholog); neutropenia (ortholog); FOUND IN DNA-directed RNA polymerase complex (inferred); nucleoplasm (inferred); nucleus (inferred)
Type:
protein-coding
RefSeq Status:
MODEL
Previously known as:
DNA-directed RNA polymerase III subunit RPC3; polymerase (RNA) III (DNA directed) polypeptide C (62kD)
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Latest Assembly:
Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 1 103,215,715 - 103,234,689 (+) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 1 102,804,442 - 102,822,966 (+) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 1 121,917,371 - 121,935,976 (-) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 1 113,733,846 - 113,752,486 (+) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 1 113,733,846 - 113,752,486 (+) Ensembl panpan1.1 panPan2
JBrowse:
View Region in Genome Browser (JBrowse)
Model
POLR3C (Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 1 103,215,715 - 103,234,689 (+) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 1 102,804,442 - 102,822,966 (+) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 1 121,917,371 - 121,935,976 (-) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 1 113,733,846 - 113,752,486 (+) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 1 113,733,846 - 113,752,486 (+) Ensembl panpan1.1 panPan2
POLR3C (Homo sapiens - human)
Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 1 145,824,200 - 145,844,402 (+) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 1 145,824,053 - 145,844,402 (+) Ensembl GRCh38 hg38 GRCh38 GRCh37 1 145,590,666 - 145,610,913 (-) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 1 144,303,962 - 144,322,241 (-) NCBI NCBI36 Build 36 hg18 NCBI36 Build 34 1 143,081,648 - 143,099,928 NCBI Celera 1 119,795,949 - 119,814,224 (-) NCBI Celera Cytogenetic Map 1 q21.1 NCBI HuRef 1 119,556,179 - 119,574,446 (-) NCBI HuRef CHM1_1 1 147,192,355 - 147,210,631 (+) NCBI CHM1_1 T2T-CHM13v2.0 1 144,941,003 - 144,961,205 (+) NCBI T2T-CHM13v2.0
Polr3c (Mus musculus - house mouse)
Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 3 96,618,836 - 96,634,803 (-) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 3 96,618,806 - 96,634,944 (-) Ensembl GRCm39 Ensembl GRCm38 3 96,711,520 - 96,727,498 (-) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 3 96,711,490 - 96,727,628 (-) Ensembl GRCm38 mm10 GRCm38 MGSCv37 3 96,515,818 - 96,531,362 (-) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 3 96,796,895 - 96,813,033 (-) NCBI MGSCv36 mm8 Celera 3 98,120,927 - 98,136,493 (-) NCBI Celera Cytogenetic Map 3 F2.1 NCBI cM Map 3 41.96 NCBI
Polr3c (Rattus norvegicus - Norway rat)
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 2 186,935,038 - 186,950,962 (-) NCBI GRCr8 mRatBN7.2 2 184,246,201 - 184,262,150 (-) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 2 184,246,204 - 184,262,208 (-) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 2 191,917,143 - 191,932,613 (-) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 2 189,710,614 - 189,726,210 (-) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 2 184,549,704 - 184,565,173 (-) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 2 198,836,282 - 198,852,368 (-) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 2 198,836,285 - 198,852,161 (-) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 2 218,323,216 - 218,339,302 (-) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 2 191,511,970 - 191,527,849 (-) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 RGSC_v3.1 2 191,474,726 - 191,490,603 (-) NCBI Celera 2 176,770,713 - 176,786,592 (-) NCBI Celera Cytogenetic Map 2 q34 NCBI
Polr3c (Chinchilla lanigera - long-tailed chinchilla)
Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955568 243,073 - 261,418 (-) Ensembl ChiLan1.0 ChiLan1.0 NW_004955568 242,834 - 263,053 (-) NCBI ChiLan1.0 ChiLan1.0
POLR3C (Canis lupus familiaris - dog)
Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 17 58,634,299 - 58,646,056 (+) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 17 58,636,244 - 58,645,838 (+) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 17 58,102,454 - 58,114,110 (+) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 17 59,631,014 - 59,642,722 (+) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 17 59,633,068 - 59,642,718 (+) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 17 58,503,834 - 58,515,493 (+) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 17 58,564,812 - 58,576,460 (+) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 17 59,291,372 - 59,303,029 (+) NCBI UU_Cfam_GSD_1.0
Polr3c (Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
POLR3C (Sus scrofa - pig)
Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl 4 99,479,372 - 99,494,142 (-) Ensembl Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa11.1 4 99,480,213 - 99,494,137 (-) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 4 109,123,503 - 109,134,738 (-) NCBI Sscrofa10.2 Sscrofa10.2 susScr3
POLR3C (Chlorocebus sabaeus - green monkey)
Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 20 12,901,879 - 12,919,748 (-) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 20 12,901,898 - 12,919,783 (-) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666038 15,581,292 - 15,599,651 (-) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
Polr3c (Heterocephalus glaber - naked mole-rat)
.
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
Ensembl Acc Id:
ENSPPAT00000027908 ⟹ ENSPPAP00000006523
Type:
CODING
Position:
Bonobo Assembly Chr Position (strand) Source PanPan1.1 Ensembl 1 113,733,846 - 113,752,486 (+) Ensembl
Ensembl Acc Id:
ENSPPAT00000027922 ⟹ ENSPPAP00000006529
Type:
CODING
Position:
Bonobo Assembly Chr Position (strand) Source PanPan1.1 Ensembl 1 113,735,454 - 113,752,150 (+) Ensembl
Ensembl Acc Id:
ENSPPAT00000027925 ⟹ ENSPPAP00000006532
Type:
CODING
Position:
Bonobo Assembly Chr Position (strand) Source PanPan1.1 Ensembl 1 113,735,454 - 113,752,083 (+) Ensembl
RefSeq Acc Id:
XM_003806199 ⟹ XP_003806247
Type:
CODING
Position:
Bonobo Assembly Chr Position (strand) Source NHGRI_mPanPan1-v2 1 103,215,715 - 103,234,689 (+) NCBI NHGRI_mPanPan1 1 102,804,442 - 102,822,966 (+) NCBI Mhudiblu_PPA_v0 1 121,917,371 - 121,935,976 (-) NCBI PanPan1.1 1 113,733,846 - 113,752,486 (+) NCBI
Sequence:
CGGAAGCCGCCGAAACTCTGGGGTAGAGTGGCACGCGCTTTTTGCTTTTCCGCATCTTCTTCGGTGGCGATCCTCGTCCTAGAAAGGGCGGTGGGCTCCACCTCGGCCTAGAAGGCCAGCGGGAGCCG TAGGAAGCCGTCGCGGGAAGCTCAGCAGAATTGGAGTTGGAGCCCCCGGATTGCGCTGACCCTGAGCTCTCAGACTCCCCAGTACAATGACTCAAGCAGAAATTAAGCTCTGTTCTTTGTTGCTGCAA GAGCATTTTGGAGAGATTGTAGAAAAAATTGGAGTCCATCTGATAAGAACCGGCAGCCAGCCACTAAGAGTAATTGCCCATGACACAGGAACATCACTGGATCAGGTGAAGAAAGCCTTGTGTGTCCT CGTCCAACATAACCTGGTGAGTTATCAAGTGCACAAACGTGGTGTGGTGGAGTATGAAGCCCAGTGCAGCCGGGTATTGCGAATGCTTAGATATCCCCGGTACATCTATACTACCAAAACTCTGTACA GTGACACTGGAGAGCTGATTGTTGAGGAGCTTCTGTTGAACGGCAAACTGACAATGTCAGCTGTTGTGAAGAAAGTGGCAGACCGGCTCACAGAGACCATGGAGGATGGCAAGACCATGGACTATGCT GAAGTATCAAACACATTTGTGCGACTGGCAGACACACACTTTGTACAACGCTGCCCTTCGGTACCTACCACTGAGAATTCAGACCCTGGGCCACCACCACCTGCCCCCACACTTGTCATTAATGAAAA GGACATGTACCTGGTTCCTAAACTCACCTTGATAGGGAAAGGTAAAAGGAGGAGATCATCTGATGAAGATGCTGCTGGGGAGCCCAAGGCCAAGAGACCAAAATATACTACAGATAACAAGGAGCCCA TTCCAGATGATGGGATTTATTGGCAGGCCAACCTTGACAGATTCCACCAACACTTCCGTGACCAAGCCATTGTGAGCGCAGTTGCTAACAGGATGGACCAGACAAGCAGCGAGATTGTGCGAACCATG CTCCGAATGAGTGAGATTACCACTTCCTCTAGTGCTCCCTTCACCCAGCCATTGTCTTCCAATGAGATCTTCAGATCCCTACCTGTTGGCTATAACATCTCTAAGCAAGTTCTTGATCAGTATCTCAC TCTGCTGGCAGATGATCCACTAGAGTTTGTTGGAAAGTCTGGCGACAGTGGTGGAGGAATGTATGTCATCAACCTCCATAAGGCATTAGCATCCCTAGCCACAGCCACTCTGGAGTCCGTCGTACAGG AGAGATTTGGGTCTCGCTGTGCTAGAATATTCCGTCTAGTTTTGCAGAAGAAACACATAGAGCAGAAGCAAGTGGAAGACTTTGCAATGATTCCTGCAAAGGAGGCAAAGGATATGCTATATAAGATG CTCTCAGAAAATTTCATGTCACTCCAGGAAATTCCCAAAACACCAGACCATGCCCCATCCAGGACCTTCTATTTATATACTGTGAACATCCTGTCAGCTGCCCGAATGTTGTTGCACAGGTGCTACAA GAGCATAGCCAACTTGATAGAAAGGAGGCAATTTGAAACCAAAGAGAATAAGCGTCTACTAGAAAAATCTCAGAGGGTAGAAGCCATCATTGCATCTATGCAGGCTACTGGTGCAGAGGAAGCACAGT TACAAGAAATAGAGGAGATGATCACAGCTCCTGAACGTCAGCAGCTAGAGACCCTGAAACGTAATGTCAACAAGTTGGATGCCAGTGAGATCCAGGTGGACGAAACCATCTTCCTGCTGGAGTCTTAC ATTGAGTGCACCATGAAGAGACAGTGATCCAGAAGAAGCATCTTCCTCAGAAGATCTGGGGGGATGGAAAGCAAAATAAAGGAGGTGCCTGGATGCATTATTTGCAGTGGGATAAGTCGCAGAGTCTT CAACTAAACCCCCCTCTCTATCCCCTGCAGCCCAGGATACACCTGAAAGAATTTGGCATATTTAGATCCATTGCTGTAGTCTCCCCTCATCAAATCTTGGCAGTGGGAAGAACCTTAAATCAACAAGG TTAATCATCTATCAGAAGCATCTGTTCCCATAAAGAAGTTACCCACACCTATGGTTACCTATATCCCTGGCAATAGGAAACTTCCTAAGAAGTTAATTTTATTTTCA
hide sequence
RefSeq Acc Id:
XP_003806247 ⟸ XM_003806199
- UniProtKB:
A0A2R8ZRI2 (UniProtKB/TrEMBL), A0A2R8ZUH5 (UniProtKB/TrEMBL)
- Sequence:
MTQAEIKLCSLLLQEHFGEIVEKIGVHLIRTGSQPLRVIAHDTGTSLDQVKKALCVLVQHNLVSYQVHKRGVVEYEAQCSRVLRMLRYPRYIYTTKTLYSDTGELIVEELLLNGKLTMSAVVKKVADR LTETMEDGKTMDYAEVSNTFVRLADTHFVQRCPSVPTTENSDPGPPPPAPTLVINEKDMYLVPKLTLIGKGKRRRSSDEDAAGEPKAKRPKYTTDNKEPIPDDGIYWQANLDRFHQHFRDQAIVSAVA NRMDQTSSEIVRTMLRMSEITTSSSAPFTQPLSSNEIFRSLPVGYNISKQVLDQYLTLLADDPLEFVGKSGDSGGGMYVINLHKALASLATATLESVVQERFGSRCARIFRLVLQKKHIEQKQVEDFA MIPAKEAKDMLYKMLSENFMSLQEIPKTPDHAPSRTFYLYTVNILSAARMLLHRCYKSIANLIERRQFETKENKRLLEKSQRVEAIIASMQATGAEEAQLQEIEEMITAPERQQLETLKRNVNKLDAS EIQVDETIFLLESYIECTMKRQ
hide sequence
Ensembl Acc Id:
ENSPPAP00000006523 ⟸ ENSPPAT00000027908
Ensembl Acc Id:
ENSPPAP00000006532 ⟸ ENSPPAT00000027925
Ensembl Acc Id:
ENSPPAP00000006529 ⟸ ENSPPAT00000027922