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Gene: LGMN (legumain) Pan paniscus

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Symbol:

LGMN

Name:

legumain

RGD ID:

11893195

Description:

ENCODES a protein that exhibits cysteine-type endopeptidase activity (inferred); cysteine-type peptidase activity (inferred); endopeptidase activator activity (inferred); INVOLVED IN associative learning (ortholog); dendritic spine organization (ortholog); memory (ortholog); ASSOCIATED WITH achondrogenesis type IA (ortholog); Experimental Liver Cirrhosis (ortholog); High Myopia (ortholog); FOUND IN apical part of cell (ortholog); late endosome (ortholog); lysosome (ortholog)

Type:

protein-coding

RefSeq Status:

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	LGMN (legumain)	NCBI	Ortholog
Mus musculus (house mouse):	Lgmn (legumain)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Lgmn (legumain)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Lgmn (legumain)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	LGMN (legumain)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Lgmn (legumain)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	LGMN (legumain)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	LGMN (legumain)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Lgmn (legumain)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly

Position:

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	15	93,861,233 - 93,907,416 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	14	93,077,738 - 93,123,921 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	14	73,337,607 - 73,383,462 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	14	92,677,608 - 92,723,051 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	14	92,677,608 - 92,723,051 (-)	Ensembl	panpan1.1		panPan2

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
LGMN	Bonobo	achondrogenesis type IA		ISO	LGMN (Homo sapiens)	8554872	ClinVar Annotator: match by term: Achondrogenesis and type IA	ClinVar	PMID:28492532
LGMN	Bonobo	High Myopia		ISO	LGMN (Homo sapiens)	8554872	ClinVar Annotator: match by term: High myopia	ClinVar

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
LGMN	Bonobo	Experimental Liver Cirrhosis		ISO	LGMN (Homo sapiens)	9068941	CTD Direct Evidence: marker/mechanism	CTD	PMID:25380136
LGMN	Bonobo	Orthomyxoviridae Infections		ISO	LGMN (Homo sapiens)	9068941	CTD Direct Evidence: marker/mechanism	CTD	PMID:22916010

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
LGMN	Bonobo	lymphatic system disease		ISO	Lgmn (Mus musculus)	9068941		MouseDO

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
LGMN	Bonobo	antigen processing and presentation of exogenous peptide antigen via MHC class II	involved_in	IEA	UniProtKB:Q99538 and ensembl:ENSP00000334052	150520179		Ensembl	GO_REF:0000107
LGMN	Bonobo	associative learning	involved_in	ISO	UniProtKB:P10636	9068941	PMID:25326800	ARUK-UCL	PMID:25326800
LGMN	Bonobo	cellular response to amyloid-beta	involved_in	IEA	UniProtKB:Q99538 and ensembl:ENSP00000334052	150520179		Ensembl	GO_REF:0000107
LGMN	Bonobo	cellular response to calcium ion	involved_in	IEA	UniProtKB:Q99538 and ensembl:ENSP00000334052	150520179		Ensembl	GO_REF:0000107
LGMN	Bonobo	cellular response to hepatocyte growth factor stimulus	involved_in	IEA	UniProtKB:Q99538 and ensembl:ENSP00000334052	150520179		Ensembl	GO_REF:0000107
LGMN	Bonobo	dendritic spine organization	involved_in	ISO	UniProtKB:P10636	9068941	PMID:25326800	ARUK-UCL	PMID:25326800
LGMN	Bonobo	memory	involved_in	ISO	UniProtKB:P10636	9068941	PMID:25326800	ARUK-UCL	PMID:25326800
LGMN	Bonobo	negative regulation of ERBB signaling pathway	involved_in	ISO	Lgmn (Mus musculus)	9068941	PMID:21292981	UniProt	PMID:21292981
LGMN	Bonobo	negative regulation of gene expression	involved_in	IEA	UniProtKB:Q99538 and ensembl:ENSP00000334052	150520179		Ensembl	GO_REF:0000107
LGMN	Bonobo	negative regulation of multicellular organism growth	acts_upstream_of_or_within	ISO	MGI:2676125	9068941	PMID:12775715	MGI	PMID:12775715
LGMN	Bonobo	negative regulation of neuron apoptotic process	acts_upstream_of_or_within	IEA	UniProtKB:Q99538 and ensembl:ENSP00000334052	150520179		Ensembl	GO_REF:0000107
LGMN	Bonobo	positive regulation of cell population proliferation	involved_in	IEA	UniProtKB:Q99538 and ensembl:ENSP00000334052	150520179		Ensembl	GO_REF:0000107
LGMN	Bonobo	positive regulation of endothelial cell chemotaxis	involved_in	IEA	UniProtKB:Q99538 and ensembl:ENSP00000334052	150520179		Ensembl	GO_REF:0000107
LGMN	Bonobo	positive regulation of long-term synaptic potentiation	involved_in	ISO	UniProtKB:P10636	9068941	PMID:25326800	ARUK-UCL	PMID:25326800
LGMN	Bonobo	positive regulation of mitotic cell cycle	involved_in	IEA	UniProtKB:Q99538 and ensembl:ENSP00000334052	150520179		Ensembl	GO_REF:0000107
LGMN	Bonobo	positive regulation of monocyte chemotaxis	involved_in	IEA	UniProtKB:Q99538 and ensembl:ENSP00000334052	150520179		Ensembl	GO_REF:0000107
LGMN	Bonobo	protein maturation	involved_in	ISO	Lgmn (Mus musculus)	9068941	PMID:37347855	UniProt	PMID:37347855
LGMN	Bonobo	proteolysis	involved_in	IEA	InterPro:IPR001096	150520179		InterPro	GO_REF:0000002
LGMN	Bonobo	proteolysis	acts_upstream_of_or_within	ISO	Lgmn (Mus musculus)	9068941	PMID:12775715	MGI	PMID:12775715
LGMN	Bonobo	proteolysis	acts_upstream_of_or_within	ISO	MGI:2676125	9068941	PMID:18374643	MGI	PMID:18374643
LGMN	Bonobo	proteolysis	involved_in	IEA	UniProtKB-KW:KW-0645	150520179		UniProt	GO_REF:0000043
LGMN	Bonobo	proteolysis involved in protein catabolic process	involved_in	IEA	PANTHER:PTN000243193 and PANTHER:PTN004332289	150520179		TreeGrafter	GO_REF:0000118
LGMN	Bonobo	proteolysis involved in protein catabolic process	involved_in	IEA	InterPro:IPR043577	150520179		InterPro	GO_REF:0000002
LGMN	Bonobo	receptor catabolic process	involved_in	ISO	Lgmn (Mus musculus)	9068941	PMID:21292981	UniProt	PMID:21292981
LGMN	Bonobo	renal system process	involved_in	ISO	Lgmn (Mus musculus)	9068941	PMID:21292981	UniProt	PMID:21292981
LGMN	Bonobo	response to acidic pH	acts_upstream_of_or_within	ISO	MGI:2676125	9068941	PMID:18374643	MGI	PMID:18374643
LGMN	Bonobo	response to acidic pH	involved_in	IEA	UniProtKB:Q99538 and ensembl:ENSP00000334052	150520179		Ensembl	GO_REF:0000107
LGMN	Bonobo	vacuolar protein processing	involved_in	IEA	PANTHER:PTN000243193 and PANTHER:PTN004332289	150520179		TreeGrafter	GO_REF:0000118

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
LGMN	Bonobo	apical part of cell	located_in	ISO	Lgmn (Mus musculus)	9068941	PMID:12775715	MGI	PMID:12775715
LGMN	Bonobo	cytoplasm	located_in	IEA	UniProtKB:Q99538 and ensembl:ENSP00000334052	150520179		Ensembl	GO_REF:0000107
LGMN	Bonobo	extracellular region	located_in	IEA	UniProtKB:Q99538 and ensembl:ENSP00000334052	150520179		Ensembl	GO_REF:0000107
LGMN	Bonobo	late endosome	located_in	ISO	Lgmn (Mus musculus)	9068941	PMID:12775715	MGI	PMID:12775715
LGMN	Bonobo	lysosomal lumen	is_active_in	IEA	UniProtKB:Q99538 and ensembl:ENSP00000334052	150520179		Ensembl	GO_REF:0000107
LGMN	Bonobo	lysosome	located_in	ISO	Lgmn (Mus musculus)	9068941	PMID:9742219	UniProt	PMID:9742219
LGMN	Bonobo	lysosome	located_in	ISO	Lgmn (Rattus norvegicus)	9068941	PMID:9742219	UniProt	PMID:9742219 and REF_RGD_ID:704328
LGMN	Bonobo	perinuclear region of cytoplasm	located_in	IEA	UniProtKB:Q99538 and ensembl:ENSP00000334052	150520179		Ensembl	GO_REF:0000107
LGMN	Bonobo	vacuole	located_in	IEA	GO:0006624	150520179		GOC	GO_REF:0000108

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
LGMN	Bonobo	cysteine-type endopeptidase activity	enables	IEA	PANTHER:PTN000243193 and PANTHER:PTN004332289	150520179		TreeGrafter	GO_REF:0000118
LGMN	Bonobo	cysteine-type endopeptidase activity	enables	IEA	UniProtKB:Q99538 and ensembl:ENSP00000334052	150520179		Ensembl	GO_REF:0000107
LGMN	Bonobo	cysteine-type endopeptidase activity	enables	IEA	EC:3.4.22.34	150520179		UniProt	GO_REF:0000003
LGMN	Bonobo	cysteine-type endopeptidase activity	enables	IEA	InterPro:IPR043577	150520179		InterPro	GO_REF:0000002
LGMN	Bonobo	cysteine-type peptidase activity	enables	IEA	UniProtKB-KW:KW-0788	150520179		UniProt	GO_REF:0000043
LGMN	Bonobo	endopeptidase activator activity	enables	IEA	UniProtKB:Q99538 and ensembl:ENSP00000334052	150520179		Ensembl	GO_REF:0000107
LGMN	Bonobo	endopeptidase activity	enables	IEA	ARBA:ARBA00028131	150520179		UniProt	GO_REF:0000117
LGMN	Bonobo	hydrolase activity	enables	IEA	UniProtKB-KW:KW-0378	150520179		UniProt	GO_REF:0000043
LGMN	Bonobo	peptidase activity	enables	IEA	UniProtKB-KW:KW-0645	150520179		UniProt	GO_REF:0000043
LGMN	Bonobo	peptidase activity	enables	IEA	InterPro:IPR001096	150520179		InterPro	GO_REF:0000002
LGMN	Bonobo	peptidase activity	enables	IEA	UniProtKB:Q99538 and ensembl:ENSP00000334052	150520179		Ensembl	GO_REF:0000107
LGMN	Bonobo	protein binding	enables	ISO	UniProtKB:P01034-PRO_0000006639 and UniProtKB:Q15828-PRO_0000006648	9068941	PMID:25630877	IntAct	PMID:25630877

PMID:22301074	PMID:30032202

LGMN
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	15	93,861,233 - 93,907,416 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	14	93,077,738 - 93,123,921 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	14	73,337,607 - 73,383,462 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	14	92,677,608 - 92,723,051 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	14	92,677,608 - 92,723,051 (-)	Ensembl	panpan1.1		panPan2

LGMN
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	14	92,703,809 - 92,748,627 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	14	92,703,807 - 92,748,679 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	14	93,170,154 - 93,214,972 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	14	92,239,907 - 92,284,765 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	14	92,239,909 - 92,284,765	NCBI
Celera	14	73,224,285 - 73,269,160 (-)	NCBI		Celera
Cytogenetic Map	14	q32.12	NCBI
HuRef	14	73,353,202 - 73,398,165 (-)	NCBI		HuRef
CHM1_1	14	93,108,397 - 93,153,238 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	14	86,935,604 - 86,980,392 (-)	NCBI		T2T-CHM13v2.0

Lgmn
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	12	102,360,341 - 102,405,987 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	12	102,360,343 - 102,406,072 (-)	Ensembl		GRCm39 Ensembl
GRCm38	12	102,394,082 - 102,439,728 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	12	102,394,084 - 102,439,813 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	12	103,632,308 - 103,677,907 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	12	102,795,148 - 102,840,747 (-)	NCBI		MGSCv36	mm8
Celera	12	103,611,726 - 103,647,892 (-)	NCBI		Celera
Cytogenetic Map	12	E	NCBI
cM Map	12	51.45	NCBI

Lgmn
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	6	127,308,913 - 127,347,355 (-)	NCBI		GRCr8
mRatBN7.2	6	121,544,048 - 121,582,495 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	6	121,544,053 - 121,582,480 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	6	121,684,520 - 121,722,056 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	6	121,979,783 - 122,017,312 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	6	121,315,105 - 121,353,227 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	6	126,282,246 - 126,308,207 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	6	126,282,233 - 126,320,726 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	6	135,492,943 - 135,518,916 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	6	126,668,905 - 126,694,866 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	6	126,672,651 - 126,698,616 (-)	NCBI
Celera	6	119,032,612 - 119,058,582 (-)	NCBI		Celera
Cytogenetic Map	6	q32	NCBI

Lgmn
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955438	14,905,856 - 14,939,256 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955438	14,905,856 - 14,938,722 (-)	NCBI	ChiLan1.0	ChiLan1.0

LGMN
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	8	1,810,263 - 1,843,116 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	8	1,728,273 - 1,843,050 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	8	1,834,051 - 1,866,767 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	8	1,864,425 - 1,878,822 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	8	1,782,672 - 1,889,344 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	8	1,802,050 - 1,834,797 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	8	1,752,395 - 1,785,146 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	8	1,879,451 - 1,912,213 (-)	NCBI		UU_Cfam_GSD_1.0

Lgmn
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	12,674,224 - 12,694,251 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936733	772,708 - 792,995 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936733	772,764 - 792,792 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

LGMN
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	7	114,173,693 - 114,217,102 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	7	114,176,217 - 114,210,096 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	7	120,780,926 - 120,811,668 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

LGMN
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	24	70,456,463 - 70,500,345 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	24	70,456,095 - 70,486,087 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666053	57,705,088 - 57,748,692 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Lgmn
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624734	9,204,790 - 9,240,309 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624734	9,207,496 - 9,240,026 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.


RefSeq Transcripts	XM_003832785	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008958213	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JARIFH020000015	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSPPAT00000054510 ⟹ ENSPPAP00000031644

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	14	92,677,608 - 92,723,051 (-)	Ensembl

Ensembl Acc Id:

ENSPPAT00000054516 ⟹ ENSPPAP00000031651

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	14	92,678,067 - 92,707,255 (-)	Ensembl

Ensembl Acc Id:

ENSPPAT00000054521 ⟹ ENSPPAP00000031656

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	14	92,678,123 - 92,707,255 (-)	Ensembl

Ensembl Acc Id:

ENSPPAT00000054527 ⟹ ENSPPAP00000031662

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	14	92,688,179 - 92,707,255 (-)	Ensembl

RefSeq Acc Id:

XM_003832785 ⟹ XP_003832833

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	15	93,861,233 - 93,907,416 (-)	NCBI
NHGRI_mPanPan1	14	93,077,738 - 93,123,921 (-)	NCBI
Mhudiblu_PPA_v0	14	73,337,607 - 73,383,446 (-)	NCBI
PanPan1.1	14	92,677,608 - 92,723,051 (-)	NCBI

Sequence:

show sequence

AGATGCCACGCCCCATAGCTCCACCAGTCACCGCGGCACAGTGGCCCTTAAGCGAGGAGCGGCGGCGCCCGCAGCAATCACAGCAGTGCGGCCGTCGTGGGTGTTTGGTGTGAGGCTGCGCGCCGCCG
CGAGTTCTCACGGTCCCGCCGGCGCCACCACCGCGGTCACTCACTGCCGCCGCCGCCACCACTGCCACCACGGTCGCCTGCCACAGGTTTCTGCAATTGAACTCCAAGGTGCAGAATGGTTTGGAAAG
TAGCTGTATTCCTCAGTGTGGCCCTGGGCATTGGTGCTGTTCCTATAGATGATCCTGAAGATGGAGGCAAGCACTGGGTGGTGATCGTGGCGGGTTCAAATGGCTGGTATAATTATAGGCACCAGGCA
GACGCGTGCCATGCCTACCAGATCATTCACCGCAATGGGATTCCTGACGAACAGATCGTTGTGATGATGTACGATGACATCGCTTACTCTGAAGACAATCCCACTCCAGGAATTGTGATCAACAGGCC
CAATGGCACAGATGTCTATCAGGGAGTCCCGAAGGACTACACCGGAGAGGATGTTACCCCACAAAATTTCCTTGCTGTGTTGAGAGGCGATGCAGAAGCAGTGAAGGGCATAGGATCCGGCAAAGTCC
TGAAGAGCGGCCCCCAGGATCACGTGTTCATTTACTTCACTGACCATGGATCTACTGGAATACTGGTTTTTCCCAATGAAGATCTTCACGTAAAGGACCTGAATGAGACCATCCATTACATGTACAAA
CACAAAATGTACCGAAAGATGGTGTTCTACATTGAAGCCTGTGAGTCTGGGTCCATGATGAACCACCTGCCGGATAACATCAATGTTTATGCAACTACTGCTGCCAACCCCAGAGAGTCGTCCTACGC
CTGTTACTATGATGAGAAGAGGTCCACGTACCTGGGGGACTGGTACAGCGTCAACTGGATGGAAGACTCGGACGTGGAAGATCTGACTAAAGAGACCCTGCACAAGCAGTACCACCTGGTAAAATCGC
ACACCAACACCAGCCACGTCATGCAGTATGGAAACAAAACAATCTCCACCATGAAAGTGATGCAGTTTCAGGGTATGAAACACAAAGCCAGTTCTCCTATCTCCCTACCTCCAGTCACACACCTTGAC
CTCACCCCCAGCCCTGATGTGCCTCTCACCATCATGAAAAGGAAACTGATGAACACCAATGATCTGGAGGAGTCCAGGCAGCTCACAGAGGAGATCCAGCGGCATCTGGATGCCAGGCACCTCATTGA
GAAGTCAGTGCGCAAGATCGTCTCCTTGCTGGCAGCGTCCGAGGCTGAGGTGGAGCAGCTCCTGTCCGAGAGAGCCCCGCTCACGGGGCACAGCTGCTACCCAGAGGCCCTGCTGCACTTCCGGACCC
ACTGCTTCAACTGGCACTCCCCCACGTACGAGTATGCGTTGAGACATTTGTACGTGCTGGTCAACCTTTGTGAGAAGCCGTATCCGCTTCACAGGATAAAATTGTCCATGGACCACGTGTGCCTTGGT
CACTACTGAAGAGCTGCCTCCTGGAAGCTTTTCCAAGTGTGAGCGCCCCACCGACTGTGTGCTGATCAGAGACTGGAGAGGTGGAGTGAGAAGTCTCCGCTGCTCGGGCCCTCCTGGGGAGCCCCCGC
TCCAGGGCTCGCTCCAGGACCTTCTTCACAAGATGACTTGCTCGCTGTTACCTACTTCCCCAGTCTTTTCTGAAAAACTACAAATTGGGGTGGGAAAAGCTCTGTATTGAGAAGGGTCACATTTGCTT
TCTAGGAGGTTTGTTGTTTTGTTTTGCCTGTTAGTTTTGAGGAGCAGGAAGCTCATGGGGGCTTCTGTAGCCCCTCTCAAAAGGAGTCTTTATTCTGAGAATTTGAAGCCGAAACCTCTTTAAATCTT
CAGAATGATTTTATTGAAGAGGGCCGCAAGCCCCAAATGGAAAACTGTTTTTAGAAAATATGATGATTTTTGATTGCTTTTGTATTTAATTCTGCAGGTGTTCAAGTCTTAAAAAATAAAGGTTTATA
ACAGAACCCAAA

hide sequence

RefSeq Acc Id:

XM_008958213 ⟹ XP_008956461

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	15	93,861,233 - 93,907,116 (-)	NCBI
NHGRI_mPanPan1	14	93,077,738 - 93,123,621 (-)	NCBI
Mhudiblu_PPA_v0	14	73,337,607 - 73,383,462 (-)	NCBI
PanPan1.1	14	92,677,608 - 92,723,019 (-)	NCBI

Sequence:

show sequence

GCGGCACAGTGGCCCTTAAGCGAGGAGCGGCGGCGCCCGCAGCAATCACAGCAGTGCGGCCGTC
GTGGGTGTTTGGTGTGAGGCTGCGCGCCGCCGCGAGTTCTCACGGTCCCGCCGGCGCCACCACCGCGGTCACTCACTGCCGCCGCCGCCACCACTGCCACCACGGTCGCCTGCCACAGGTTTCTGCAA
TTGAACTCCAAGGTGCAGAATGGTTTGGAAAGTAGCTGTATTCCTCAGTGTGGCCCTGGGCATTGGTGCTGTTCCTATAGATGATCCTGAAGATGGAGGCAAGCACTGGGTGGTGATCGTGGCGGGTT
CAAATGGCTGGTATAATTATAGGCACCAGGCAGACGCGTGCCATGCCTACCAGATCATTCACCGCAATGGGATTCCTGACGAACAGATCGTTGTGATGATGTACGATGACATCGCTTACTCTGAAGAC
AATCCCACTCCAGGAATTGTGATCAACAGGCCCAATGGCACAGATGTCTATCAGGGAGTCCCGAAGGACTACACCGGAGAGGATGTTACCCCACAAAATTTCCTTGCTGTGTTGAGAGGCGATGCAGA
AGCAGTGAAGGGCATAGGATCCGGCAAAGTCCTGAAGAGCGGCCCCCAGGATCACGTGTTCATTTACTTCACTGACCATGGATCTACTGGAATACTGGTTTTTCCCAATGAAGATCTTCACGTAAAGG
ACCTGAATGAGACCATCCATTACATGTACAAACACAAAATGTACCGAAAGATGGTGTTCTACATTGAAGCCTGTGAGTCTGGGTCCATGATGAACCACCTGCCGGATAACATCAATGTTTATGCAACT
ACTGCTGCCAACCCCAGAGAGTCGTCCTACGCCTGTTACTATGATGAGAAGAGGTCCACGTACCTGGGGGACTGGTACAGCGTCAACTGGATGGAAGACTCGGACGTGGAAGATCTGACTAAAGAGAC
CCTGCACAAGCAGTACCACCTGGTAAAATCGCACACCAACACCAGCCACGTCATGCAGTATGGAAACAAAACAATCTCCACCATGAAAGTGATGCAGTTTCAGGGTATGAAACACAAAGCCAGTTCTC
CTATCTCCCTACCTCCAGTCACACACCTTGACCTCACCCCCAGCCCTGATGTGCCTCTCACCATCATGAAAAGGAAACTGATGAACACCAATGATCTGGAGGAGTCCAGGCAGCTCACAGAGGAGATC
CAGCGGCATCTGGATGCCAGGCACCTCATTGAGAAGTCAGTGCGCAAGATCGTCTCCTTGCTGGCAGCGTCCGAGGCTGAGGTGGAGCAGCTCCTGTCCGAGAGAGCCCCGCTCACGGGGCACAGCTG
CTACCCAGAGGCCCTGCTGCACTTCCGGACCCACTGCTTCAACTGGCACTCCCCCACGGATAAAATTGTCCATGGACCACGTGTGCCTTGGTCACTACTGAAGAGCTGCCTCCTGGAAGCTTTTCCAA
GTGTGAGCGCCCCACCGACTGTGTGCTGATCAGAGACTGGAGAGGTGGAGTGAGAAGTCTCCGCTGCTCGGGCCCTCCTGGGGAGCCCCCGCTCCAGGGCTCGCTCCAGGACCTTCTTCACAAGATGA
CTTGCTCGCTGTTACCTACTTCCCCAGTCTTTTCTGAAAAACTACAAATTGGGGTGGGAAAAGCTCTGTATTGAGAAGGGTCACATTTGCTTTCTAGGAGGTTTGTTGTTTTGTTTTGCCTGTTAGTT
TTGAGGAGCAGGAAGCTCATGGGGGCTTCTGTAGCCCCTCTCAAAAGGAGTCTTTATTCTGAGAATTTGAAGCCGAAACCTCTTTAAATCTTCAGAATGATTTTATTGAAGAGGGCCGCAAGCCCCAA
ATGGAAAACTGTTTTTAGAAAATATGATGATTTTTGATTGCTTTTGTATTTAATTCTGCAGGTGTTCAAGTCTTAAAAAATAAAGGTTTATAACAGAACCCAAA

hide sequence


Protein RefSeqs	XP_003832833	(Get FASTA)	NCBI Sequence Viewer
	XP_008956461	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSPPAP00000031644.1
	ENSPPAP00000031651.1
	ENSPPAP00000031656.1
	ENSPPAP00000031662.1

RefSeq Acc Id:

XP_008956461 ⟸ XM_008958213

- Peptide Label:

isoform X2

- Sequence:

show sequence

MVWKVAVFLSVALGIGAVPIDDPEDGGKHWVVIVAGSNGWYNYRHQADACHAYQIIHRNGIPDEQIVVMMYDDIAYSEDNPTPGIVINRPNGTDVYQGVPKDYTGEDVTPQNFLAVLRGDAEAVKGIG
SGKVLKSGPQDHVFIYFTDHGSTGILVFPNEDLHVKDLNETIHYMYKHKMYRKMVFYIEACESGSMMNHLPDNINVYATTAANPRESSYACYYDEKRSTYLGDWYSVNWMEDSDVEDLTKETLHKQYH
LVKSHTNTSHVMQYGNKTISTMKVMQFQGMKHKASSPISLPPVTHLDLTPSPDVPLTIMKRKLMNTNDLEESRQLTEEIQRHLDARHLIEKSVRKIVSLLAASEAEVEQLLSERAPLTGHSCYPEALL
HFRTHCFNWHSPTDKIVHGPRVPWSLLKSCLLEAFPSVSAPPTVC

hide sequence

RefSeq Acc Id:	XP_003832833 ⟸ XM_003832785
- Peptide Label:	isoform X1
- UniProtKB:	A0A2R9BQF5 (UniProtKB/TrEMBL), A0A2R9BPS2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MVWKVAVFLSVALGIGAVPIDDPEDGGKHWVVIVAGSNGWYNYRHQADACHAYQIIHRNGIPDE QIVVMMYDDIAYSEDNPTPGIVINRPNGTDVYQGVPKDYTGEDVTPQNFLAVLRGDAEAVKGIGSGKVLKSGPQDHVFIYFTDHGSTGILVFPNEDLHVKDLNETIHYMYKHKMYRKMVFYIEACESG SMMNHLPDNINVYATTAANPRESSYACYYDEKRSTYLGDWYSVNWMEDSDVEDLTKETLHKQYHLVKSHTNTSHVMQYGNKTISTMKVMQFQGMKHKASSPISLPPVTHLDLTPSPDVPLTIMKRKLM NTNDLEESRQLTEEIQRHLDARHLIEKSVRKIVSLLAASEAEVEQLLSERAPLTGHSCYPEALLHFRTHCFNWHSPTYEYALRHLYVLVNLCEKPYPLHRIKLSMDHVCLGHY hide sequence

Ensembl Acc Id:

ENSPPAP00000031644 ⟸ ENSPPAT00000054510

Ensembl Acc Id:

ENSPPAP00000031651 ⟸ ENSPPAT00000054516

Ensembl Acc Id:

ENSPPAP00000031656 ⟸ ENSPPAT00000054521

Protein Domains

Legumain prodomain

Database	Acc Id	Source(s)
Ensembl Genes	ENSPPAG00000038740	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSPPAT00000054510.1	UniProtKB/TrEMBL
	ENSPPAT00000054516.1	UniProtKB/TrEMBL
	ENSPPAT00000054521.1	UniProtKB/TrEMBL
	ENSPPAT00000054527.1	UniProtKB/TrEMBL
Gene3D-CATH	1.10.132.130	UniProtKB/TrEMBL
	3.40.50.1460	UniProtKB/TrEMBL
InterPro	IPR043577	UniProtKB/TrEMBL
	Legum_prodom	UniProtKB/TrEMBL
	Legumain_prodom_sf	UniProtKB/TrEMBL
	Peptidase_C13	UniProtKB/TrEMBL
KEGG Report	pps:100979480	UniProtKB/TrEMBL
NCBI Gene	LGMN	ENTREZGENE
PANTHER	LEGUMAIN	UniProtKB/TrEMBL
	PTHR12000	UniProtKB/TrEMBL
Pfam	Legum_prodom	UniProtKB/TrEMBL
	Peptidase_C13	UniProtKB/TrEMBL
PIRSF	Legumain	UniProtKB/TrEMBL
	PIRSF500139	UniProtKB/TrEMBL
PRINTS	HEMOGLOBNASE	UniProtKB/TrEMBL
UniProt	A0A2R9BPR8_PANPA	UniProtKB/TrEMBL
	A0A2R9BPS2	ENTREZGENE, UniProtKB/TrEMBL
	A0A2R9BQF5	ENTREZGENE, UniProtKB/TrEMBL
	A0A2R9BYR8_PANPA	UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

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