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Gene: USP1 (ubiquitin specific peptidase 1) Pan paniscus

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Symbol:

USP1

Name:

ubiquitin specific peptidase 1

RGD ID:

11830051

Description:

ENCODES a protein that exhibits peptidase activity (ortholog); INVOLVED IN skeletal system development (ortholog); ASSOCIATED WITH congenital disorder of glycosylation It (ortholog); Fanconi anemia (ortholog); intellectual disability (ortholog); FOUND IN cytosol (inferred); nucleoplasm (inferred); nucleus (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

ubiquitin carboxyl-terminal hydrolase 1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly

Position:

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	164,400,198 - 164,427,944 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	163,549,851 - 163,577,601 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	61,694,775 - 61,710,216 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	63,509,781 - 63,525,446 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	63,510,196 - 63,525,446 (+)	Ensembl	panpan1.1		panPan2

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
USP1	Bonobo	congenital disorder of glycosylation It		ISO	USP1 (Homo sapiens)	8554872	ClinVar Annotator: match by term: PGM1-congenital disorder of glycosylation	ClinVar	PMID:28492532
USP1	Bonobo	intellectual disability		ISO	USP1 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Intellectual disability and severe	ClinVar	PMID:25741868

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
USP1	Bonobo	Fanconi anemia		ISO	Usp1 (Mus musculus)	9068941		MouseDO

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
USP1	Bonobo	monoubiquitinated protein deubiquitination	involved_in	IEA	UniProtKB:O94782 and ensembl:ENSP00000343526	150520179		Ensembl	GO_REF:0000107
USP1	Bonobo	positive regulation of receptor signaling pathway via JAK-STAT	involved_in	IEA	UniProtKB:O94782 and ensembl:ENSP00000343526	150520179		Ensembl	GO_REF:0000107
USP1	Bonobo	protein deubiquitination	involved_in	IEA	InterPro:IPR001394 and InterPro:IPR033815	150520179		InterPro	GO_REF:0000002
USP1	Bonobo	protein deubiquitination	involved_in	IEA	UniProtKB:O94782 and ensembl:ENSP00000343526	150520179		Ensembl	GO_REF:0000107
USP1	Bonobo	protein deubiquitination	involved_in	IEA	PANTHER:PTN002364247	150520179		TreeGrafter	GO_REF:0000118
USP1	Bonobo	proteolysis	involved_in	IEA	UniProtKB-KW:KW-0645	150520179		UniProt	GO_REF:0000043
USP1	Bonobo	regulation of DNA repair	involved_in	IEA	UniProtKB:O94782 and ensembl:ENSP00000343526	150520179		Ensembl	GO_REF:0000107
USP1	Bonobo	regulation of DNA repair	involved_in	IEA	InterPro:IPR033815	150520179		InterPro	GO_REF:0000002
USP1	Bonobo	response to UV	involved_in	IEA	UniProtKB:O94782 and ensembl:ENSP00000343526	150520179		Ensembl	GO_REF:0000107
USP1	Bonobo	skeletal system development	involved_in	IEA	UniProtKB:Q8BJQ2 and ensembl:ENSMUSP00000030289	150520179		Ensembl	GO_REF:0000107
USP1	Bonobo	skeletal system development	acts_upstream_of_or_within	ISO	MGI:4363583	9068941	PMID:21925315	MGI	PMID:21925315

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
USP1	Bonobo	cytosol	located_in	IEA	PANTHER:PTN002364247	150520179		TreeGrafter	GO_REF:0000118
USP1	Bonobo	nucleoplasm	located_in	IEA	UniProtKB:O94782 and ensembl:ENSP00000343526	150520179		Ensembl	GO_REF:0000107
USP1	Bonobo	nucleus	located_in	IEA	UniProtKB:O94782 and ensembl:ENSP00000343526	150520179		Ensembl	GO_REF:0000107
USP1	Bonobo	nucleus	located_in	IEA	PANTHER:PTN002364247	150520179		TreeGrafter	GO_REF:0000118

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
USP1	Bonobo	cysteine-type deubiquitinase activity	enables	IEA	EC:3.4.19.12	150520179		UniProt	GO_REF:0000003
USP1	Bonobo	cysteine-type deubiquitinase activity	enables	IEA	UniRule:UR000880756	150520179		UniProt	GO_REF:0000104
USP1	Bonobo	cysteine-type deubiquitinase activity	enables	IEA	PANTHER:PTN002364247	150520179		TreeGrafter	GO_REF:0000118
USP1	Bonobo	cysteine-type deubiquitinase activity	enables	IEA	UniProtKB:O94782 and ensembl:ENSP00000343526	150520179		Ensembl	GO_REF:0000107
USP1	Bonobo	cysteine-type deubiquitinase activity	enables	IEA	InterPro:IPR001394 and InterPro:IPR018200	150520179		InterPro	GO_REF:0000002
USP1	Bonobo	cysteine-type endopeptidase activity	enables	IEA	InterPro:IPR033815	150520179		InterPro	GO_REF:0000002
USP1	Bonobo	cysteine-type peptidase activity	enables	IEA	UniProtKB-KW:KW-0788	150520179		UniProt	GO_REF:0000043
USP1	Bonobo	peptidase activity	enables	ISO	USP1 (Homo sapiens)	9068941	PMID:16531995	Reactome	PMID:16531995
USP1	Bonobo	protein binding	enables	ISO	UniProtKB:Q8TAF3	9068941	PMID:18082604 more ...	UniProt	PMID:18082604 more ...
USP1	Bonobo	protein binding	enables	ISO	UniProtKB:Q8TAF3-1	9068941	PMID:26388029	IntAct	PMID:26388029

PMID:22301074	PMID:30032202

USP1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	164,400,198 - 164,427,944 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	163,549,851 - 163,577,601 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	61,694,775 - 61,710,216 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	63,509,781 - 63,525,446 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	63,510,196 - 63,525,446 (+)	Ensembl	panpan1.1		panPan2

USP1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	62,436,395 - 62,451,804 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	62,436,297 - 62,451,804 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	1	62,902,066 - 62,917,475 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	62,674,563 - 62,690,063 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	1	62,614,699 - 62,629,430	NCBI
Celera	1	61,191,184 - 61,206,684 (+)	NCBI		Celera
Cytogenetic Map	1	p31.3	NCBI
HuRef	1	61,014,014 - 61,029,515 (+)	NCBI		HuRef
CHM1_1	1	63,017,306 - 63,032,808 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	1	62,314,982 - 62,330,391 (+)	NCBI		T2T-CHM13v2.0

Usp1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	4	98,812,047 - 98,823,780 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	4	98,812,047 - 98,823,780 (+)	Ensembl		GRCm39 Ensembl
GRCm38	4	98,923,810 - 98,935,543 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	4	98,923,810 - 98,935,543 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	4	98,590,501 - 98,602,224 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	4	98,415,828 - 98,427,551 (+)	NCBI		MGSCv36	mm8
Celera	4	97,290,878 - 97,302,597 (+)	NCBI		Celera
Cytogenetic Map	4	C6	NCBI
cM Map	4	45.6	NCBI

Usp1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	118,703,056 - 118,714,426 (+)	NCBI		GRCr8
mRatBN7.2	5	113,587,564 - 113,598,934 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	113,587,564 - 113,598,932 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	5	116,161,227 - 116,172,610 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	5	117,886,562 - 117,897,946 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	5	117,949,094 - 117,960,477 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	5	117,583,502 - 117,594,872 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	117,583,502 - 117,594,870 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	5	121,525,009 - 121,536,379 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	5	119,364,515 - 119,375,885 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	5	119,369,740 - 119,381,109 (+)	NCBI
Celera	5	112,151,349 - 112,162,719 (+)	NCBI		Celera
Cytogenetic Map	5	q33	NCBI

Usp1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955423	27,237,003 - 27,251,892 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955423	27,236,242 - 27,254,064 (-)	NCBI	ChiLan1.0	ChiLan1.0

USP1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	5	47,655,533 - 47,666,767 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	5	47,656,039 - 47,666,210 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	5	47,709,417 - 47,728,116 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	5	47,832,714 - 47,851,368 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	5	47,839,987 - 47,850,507 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	5	47,787,677 - 47,806,321 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	5	47,734,051 - 47,752,692 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	5	47,996,113 - 48,014,814 (-)	NCBI		UU_Cfam_GSD_1.0

Usp1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405058	75,834,633 - 75,844,494 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936692	148,116 - 159,170 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936692	147,699 - 159,921 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

USP1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	149,970,915 - 149,985,509 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	6	149,971,471 - 149,985,946 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

USP1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	20	70,602,300 - 70,617,280 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	20	70,603,056 - 70,614,069 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666033	46,836,799 - 46,851,713 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Usp1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624742	31,391,022 - 31,399,724 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624742	31,390,279 - 31,399,789 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.


RefSeq Transcripts	XM_003809155	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_003809156	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_055091891	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JARIFH020000001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSPPAT00000032977 ⟹ ENSPPAP00000010327

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	1	63,510,196 - 63,525,446 (+)	Ensembl

RefSeq Acc Id:

XM_003809155 ⟹ XP_003809203

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	1	164,400,198 - 164,415,615 (-)	NCBI
NHGRI_mPanPan1	1	163,549,851 - 163,564,757 (-)	NCBI
Mhudiblu_PPA_v0	1	61,695,126 - 61,710,216 (+)	NCBI
PanPan1.1	1	63,510,196 - 63,525,446 (+)	NCBI

Sequence:

show sequence

CTCGCGCGCACGAATGGTTAAAAAAAGGGTGTGAGGCTCGAGCCCGCCAGCCAGGCCGCTAGCACCTCGCGCGCGCCCTCAGCGAGGACCCGCACGAGCTGCCCGGCTCTGTGCCTGCGTTGTTTGAA
ACTGTGGAACCCGTTAGGCTTTTGGGGAACTACAGTCCCAGCTGGCTCCGGAGCCCGTGCGTGCCAGGGGCGAGTGGCCGTCGCGAGACGGCTCCTGCCTTTCGTGTCTCTGCAGCGTGGAGACTGGA
ACCGGCAATTTCAAAGGACGCCACGTTCAATCGCAGCGCTGGCGCGGGCGGAGGCTAAAACACGGGGGTCCTGAGACTGAGGAAAACGCGCCAAGTTCCCCTCGGTGGCGGAGTGCTAAAGACCCTAG
CGGTTCAGGCGTTCGGCGAGCGGGGCCGCTGCTTGTTGCGCTCCTGGCTCTCCCGGGGCGGGCGCAGATGGGCGCCGCTCCCGCGATGTAGTTGGTGTTGGTGCAAGGCGGCAGCGAGCGGCGGTCGG
GGTTCCCGCTCTTGGGAGCGGATGGTCACTACCCCGCGGGGAGGGCGAGCCGACCAGATTTTCCTGGGGCCGGGGACCCGGCGGGCTCGGGGCAGGGACTCACCTGTCGCACCCACACTCATTCGGGT
TGGACTTGCCGGCGTCACCGCCGCGGACTTCGCTTTTGGGCCATGACCAGATATAATTGGTGATTACAACTTTCCTCTATAAATTAACTCTTGACACTCCTTGGGATTTGAAGAAAAAAATGCCTGGT
GTCATACCTAGTGAAAGTAATGGACTTTCAAGAGGTAGCCCTTCAAAGAAAAACAGACTTTCCTTAAAGTTTTTTCAGAAAAAGGAAACTAAGAGAGCTTTGGATTTCACAGATTCTCAAGAAAATGA
AGAAAAAGCTTCTGAATATAGAGCATCTGAAATTGATCAAGTTGTTCCTGCAGCACAGTCTTCACCTATAAACTGTGAGAAGAGAGAAAACTTGTTACCATTTGTGGGACTGAATAATCTCGGCAATA
CTTGCTATCTTAATAGTATACTTCAGGTATTATATTTTTGTCCCGGTTTTAAATCTGGAGTAAAGCACTTATTTAATATTATTTCAAGGAAGAAAGAAGCTCTAAAGGATGAAGCCAATCAAAAAGAC
AAAGGAAATTGCAAAGAAGATTCTTTGGCAAGTTATGAATTGATATGCAGTTTACAGTCCTTAATCATTTCGGTTGAACAGCTCCAGGCTAGTTTTCTCTTAAATCCAGAGAAATATACTGATGAACT
TGCCACTCAGCCAAGGCGACTGCTTAACACACTGAGGGAACTCAACCCTATGTATGAAGGATATCTACAGCATGATGCACAGGAAGTATTACAATGTATTTTGGGAAACATTCAAGAAACATGCCAAC
TCCTAAAAAAAGAAGAAGTAAAAAATGTGGCAGAATTACCTACTAAGGTAGAAGAAATACCTCATCCGAAAGAGGAAATGAGTGGTATTAACAGCATGGAGATGGACAGTATGAGGCATTCTGAAGAC
TTTAAAGAAAAACTCCCAAAAGGAAATGGGAAAAGAAAAAGTGACACTGAATTTGGTAACATGAAGAAAAAAGTTAAAGTATCCAAGGAACACCAGTCATTGGAAGAGAACCAGAGACAAACTAGATC
AAAAAGAAAAGCTACAAGTGATACATTAGAGAGTCCTCCTAAAATAATTCCCAAGTATATTTCTGAAAATGAGAGTCCAAGACCCTCACAAAAGAAATCAAGAGTTAAAATAAATTGGTTAAAGTCTG
CAACTAAGCAACCCAGCATTCTTTCTAAATTCTGTAGTCTGGGAAAAATAACAACAAACCAAGGAGTCAAAGGACAATCTAAAGAAAATGAATGTGATCCTGAAGAGGACTTGGGGAAGTGTGAAAGT
GATAACACAACTAATGGTTGTGGACTTGAATCTCCAGGAAATACTGTTACACCTGTAAATGTTAATGAAGTTAAACCCATAAACAAAGGTGAAGAACAAATTGGTTTTGAGCTAGTGGAGAAATTATT
TCAAGGTCAGCTGGTATTAAGGACGCGTTGCTTGGAATGTGAAAGTTTAACAGAAAGAAGAGAAGATTTTCAAGACATCAGTGTGCCAGTACAAGAAGATGAGCTTTCCAAAGTAGAGGAGAGTTCTG
AAATTTCTCCAGAGCCAAAAACAGAAATGAAGACCCTGAGATGGGCAATTTCACAATTTGCTTCAGTAGAAAGGATTGTAGGAGAAGATAAATATTTCTGTGAAAACTGCCATCATTATACTGAAGCT
GAACGAAGTCTTTTGTTTGACAAAATGCCTGAAGTTATAACTATTCATTTGAAGTGCTTTGCTGCTAGTGGTTTGGAGTTTGATTGTTATGGTGGTGGACTTTCCAAGATCAACACTCCTTTATTGAC
ACCTCTTAAATTGTCACTAGAAGAATGGAGCACAAAGCCAACTAACGACAGCTATGGATTATTTGCGGTTGTGATGCATAGTGGTATTACAATTAGTAGTGGGCATTACACTGCTTCTGTTAAAGTCA
CTGACCTTAACAGTTTAGAACTAGATAAAGGAAATTTTGTGGTTGACCAAATGTGTGAAATAGGTAAGCCAGAACCATTGAATGAGGAGGAAGCAAGGGGTGTGGTTGAGAATTATAATGATGAAGAA
GTGTCAATTAGAGTTGGTGGAAATACACAGCCAAGTAAAGTTTTGAACAAAAAAAATGTAGAAGCTATTGGACTTCTTGGAGGACAAAAGAGCAAAGCAGATTATGAGCTATACAACAAAGCCTCTAA
TCCTGATAAGGTTGCTAGTACAGCGTTTGCTGAAAATAGAAATTCTGAGACTAGTGATACTACTGGGACCCATGAATCTGATAGAAACAAGGAATCCAGTGACCAAACAGGCATTAATATTAGTGGAT
TTGAGAACAAAATTTCATACGTAGTGCAAAGCTTAAAGGAGTATGAGGGGAAGTGGTTGCTTTTTGATGATTCTGAAGTCAAAGTTACTGAAGAGAAGGACTTTCTGAATTCTCTTTCCCCTTCTACA
TCTCCTACTTCTACTCCTTACTTGCTATTTTATAAGAAATTATAGAGTGAGTGTATTTTCCTTGTGTATATATTAAACACACCCATACAAACATTGGTAAAGTTGATTACATCAAAGAATCTTTAGCT
TATCTTTTGAAGCTACTGGATATTATTGGTCTCTCTAGGTTTTTATATAAATAGTGAAATTTGAATTACTGAAAACCATGTTAATTTTTAGAACTCATTTTCCTCAGTAGAGACTAGTGATGCATTAG
CTTCTGGGAACAAACTTGTATCGGTTCTTAATTAAATTATCCAAAACGGAGGCATTTAAACACTTGGATTTACACCAGTCTTTTGTGTTTGCTTTTTAAAATAAAGTGCTTGTATTTGTATTCTCCAT
ATTTTGGAGTAATTATCTACATGATGTTTATAGTTCCTGTGGTTTTTCACCCAAGAAGCAGAATCTCATTCAGTACATTTAGTTTTATAAGAGTCATGAAGCTAAATCCTTGGGCTATGTCAGAGGCA
CAAAGTCTAGAATGTGTGTATTCACAATGGTGTATGTACATTTTGTGCCTTGATTCACTTAGAAAAGTGTCTCAGAAAACCTGGACAGTTCGCTTCTACACAAGAATTTTATATGTATTTATGAAGAT
GATTCTGTACCCTAGTATATCTTTTTGGGCATGGACTAATTTGTATCTGTTTAACTCATATTCTGCACGATCTGTATATAGTACATCAAACTTAGAGGTGTGACCTTAAATTTAACTTTTTTTAAAAA
CTGGGAGGTCAATAAAATTTAAACTGCTTAACTATGTATATGAATATTTGAATTTTTTACTTGTATATTTTTATAAATACAGCTGAATTTTCTTAAAGCGAA

hide sequence

RefSeq Acc Id:

XM_003809156 ⟹ XP_003809204

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	1	164,400,198 - 164,417,233 (-)	NCBI
NHGRI_mPanPan1	1	163,549,851 - 163,565,593 (-)	NCBI
Mhudiblu_PPA_v0	1	61,694,775 - 61,710,216 (+)	NCBI
PanPan1.1	1	63,509,781 - 63,525,446 (+)	NCBI

Sequence:

show sequence

CGGAGGCGGGGCTTACCGCGAGGGCCTCGCTCCGGAAGCCGCACCCTCCGCGGCGTCCCACCGTCGAGGATTAACAAAACGCCAAACAAGATTTTAACAGTCGGCAGCGAAAGCGCGCACTCGAGCGC
CAATGAGAGCGGAAGGAGGGGCACCGCGCCTGAGGAACACTCCGTATGTCGAACAATGATTGGCTGGAGCCCACCTTTCTTCTTTTTTGCTATTAGATGGGCTTGCTGCTCCCGCCCATCTAATTGGC
TTTGGTCTAGATATAATTGGTGATTACAACTTTCCTCTATAAATTAACTCTTGACACTCCTTGGGATTTGAAGAAAAAAATGCCTGGTGTCATACCTAGTGAAAGTAATGGACTTTCAAGAGGTAGCC
CTTCAAAGAAAAACAGACTTTCCTTAAAGTTTTTTCAGAAAAAGGAAACTAAGAGAGCTTTGGATTTCACAGATTCTCAAGAAAATGAAGAAAAAGCTTCTGAATATAGAGCATCTGAAATTGATCAA
GTTGTTCCTGCAGCACAGTCTTCACCTATAAACTGTGAGAAGAGAGAAAACTTGTTACCATTTGTGGGACTGAATAATCTCGGCAATACTTGCTATCTTAATAGTATACTTCAGGTATTATATTTTTG
TCCCGGTTTTAAATCTGGAGTAAAGCACTTATTTAATATTATTTCAAGGAAGAAAGAAGCTCTAAAGGATGAAGCCAATCAAAAAGACAAAGGAAATTGCAAAGAAGATTCTTTGGCAAGTTATGAAT
TGATATGCAGTTTACAGTCCTTAATCATTTCGGTTGAACAGCTCCAGGCTAGTTTTCTCTTAAATCCAGAGAAATATACTGATGAACTTGCCACTCAGCCAAGGCGACTGCTTAACACACTGAGGGAA
CTCAACCCTATGTATGAAGGATATCTACAGCATGATGCACAGGAAGTATTACAATGTATTTTGGGAAACATTCAAGAAACATGCCAACTCCTAAAAAAAGAAGAAGTAAAAAATGTGGCAGAATTACC
TACTAAGGTAGAAGAAATACCTCATCCGAAAGAGGAAATGAGTGGTATTAACAGCATGGAGATGGACAGTATGAGGCATTCTGAAGACTTTAAAGAAAAACTCCCAAAAGGAAATGGGAAAAGAAAAA
GTGACACTGAATTTGGTAACATGAAGAAAAAAGTTAAAGTATCCAAGGAACACCAGTCATTGGAAGAGAACCAGAGACAAACTAGATCAAAAAGAAAAGCTACAAGTGATACATTAGAGAGTCCTCCT
AAAATAATTCCCAAGTATATTTCTGAAAATGAGAGTCCAAGACCCTCACAAAAGAAATCAAGAGTTAAAATAAATTGGTTAAAGTCTGCAACTAAGCAACCCAGCATTCTTTCTAAATTCTGTAGTCT
GGGAAAAATAACAACAAACCAAGGAGTCAAAGGACAATCTAAAGAAAATGAATGTGATCCTGAAGAGGACTTGGGGAAGTGTGAAAGTGATAACACAACTAATGGTTGTGGACTTGAATCTCCAGGAA
ATACTGTTACACCTGTAAATGTTAATGAAGTTAAACCCATAAACAAAGGTGAAGAACAAATTGGTTTTGAGCTAGTGGAGAAATTATTTCAAGGTCAGCTGGTATTAAGGACGCGTTGCTTGGAATGT
GAAAGTTTAACAGAAAGAAGAGAAGATTTTCAAGACATCAGTGTGCCAGTACAAGAAGATGAGCTTTCCAAAGTAGAGGAGAGTTCTGAAATTTCTCCAGAGCCAAAAACAGAAATGAAGACCCTGAG
ATGGGCAATTTCACAATTTGCTTCAGTAGAAAGGATTGTAGGAGAAGATAAATATTTCTGTGAAAACTGCCATCATTATACTGAAGCTGAACGAAGTCTTTTGTTTGACAAAATGCCTGAAGTTATAA
CTATTCATTTGAAGTGCTTTGCTGCTAGTGGTTTGGAGTTTGATTGTTATGGTGGTGGACTTTCCAAGATCAACACTCCTTTATTGACACCTCTTAAATTGTCACTAGAAGAATGGAGCACAAAGCCA
ACTAACGACAGCTATGGATTATTTGCGGTTGTGATGCATAGTGGTATTACAATTAGTAGTGGGCATTACACTGCTTCTGTTAAAGTCACTGACCTTAACAGTTTAGAACTAGATAAAGGAAATTTTGT
GGTTGACCAAATGTGTGAAATAGGTAAGCCAGAACCATTGAATGAGGAGGAAGCAAGGGGTGTGGTTGAGAATTATAATGATGAAGAAGTGTCAATTAGAGTTGGTGGAAATACACAGCCAAGTAAAG
TTTTGAACAAAAAAAATGTAGAAGCTATTGGACTTCTTGGAGGACAAAAGAGCAAAGCAGATTATGAGCTATACAACAAAGCCTCTAATCCTGATAAGGTTGCTAGTACAGCGTTTGCTGAAAATAGA
AATTCTGAGACTAGTGATACTACTGGGACCCATGAATCTGATAGAAACAAGGAATCCAGTGACCAAACAGGCATTAATATTAGTGGATTTGAGAACAAAATTTCATACGTAGTGCAAAGCTTAAAGGA
GTATGAGGGGAAGTGGTTGCTTTTTGATGATTCTGAAGTCAAAGTTACTGAAGAGAAGGACTTTCTGAATTCTCTTTCCCCTTCTACATCTCCTACTTCTACTCCTTACTTGCTATTTTATAAGAAAT
TATAGAGTGAGTGTATTTTCCTTGTGTATATATTAAACACACCCATACAAACATTGGTAAAGTTGATTACATCAAAGAATCTTTAGCTTATCTTTTGAAGCTACTGGATATTATTGGTCTCTCTAGGT
TTTTATATAAATAGTGAAATTTGAATTACTGAAAACCATGTTAATTTTTAGAACTCATTTTCCTCAGTAGAGACTAGTGATGCATTAGCTTCTGGGAACAAACTTGTATCGGTTCTTAATTAAATTAT
CCAAAACGGAGGCATTTAAACACTTGGATTTACACCAGTCTTTTGTGTTTGCTTTTTAAAATAAAGTGCTTGTATTTGTATTCTCCATATTTTGGAGTAATTATCTACATGATGTTTATAGTTCCTGT
GGTTTTTCACCCAAGAAGCAGAATCTCATTCAGTACATTTAGTTTTATAAGAGTCATGAAGCTAAATCCTTGGGCTATGTCAGAGGCACAAAGTCTAGAATGTGTGTATTCACAATGGTGTATGTACA
TTTTGTGCCTTGATTCACTTAGAAAAGTGTCTCAGAAAACCTGGACAGTTCGCTTCTACACAAGAATTTTATATGTATTTATGAAGATGATTCTGTACCCTAGTATATCTTTTTGGGCATGGACTAAT
TTGTATCTGTTTAACTCATATTCTGCACGATCTGTATATAGTACATCAAACTTAGAGGTGTGACCTTAAATTTAACTTTTTTTAAAAACTGGGAGGTCAATAAAATTTAAACTGCTTAACTATGTATA
TGAATATTTGAATTTTTTACTTGTATATTTTTATAAATACAGCTGAATTTTCTTAAAGCGAA

hide sequence

RefSeq Acc Id:

XM_055091891 ⟹ XP_054947866

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	1	164,400,198 - 164,427,944 (-)	NCBI
NHGRI_mPanPan1	1	163,549,851 - 163,577,601 (-)	NCBI


Protein RefSeqs	XP_003809203	(Get FASTA)	NCBI Sequence Viewer
	XP_003809204	(Get FASTA)	NCBI Sequence Viewer
	XP_054947866	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSPPAP00000010327.1

RefSeq Acc Id:

XP_003809204 ⟸ XM_003809156

- UniProtKB:

A0A2R8ZZC2 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MPGVIPSESNGLSRGSPSKKNRLSLKFFQKKETKRALDFTDSQENEEKASEYRASEIDQVVPAAQSSPINCEKRENLLPFVGLNNLGNTCYLNSILQVLYFCPGFKSGVKHLFNIISRKKEALKDEAN
QKDKGNCKEDSLASYELICSLQSLIISVEQLQASFLLNPEKYTDELATQPRRLLNTLRELNPMYEGYLQHDAQEVLQCILGNIQETCQLLKKEEVKNVAELPTKVEEIPHPKEEMSGINSMEMDSMRH
SEDFKEKLPKGNGKRKSDTEFGNMKKKVKVSKEHQSLEENQRQTRSKRKATSDTLESPPKIIPKYISENESPRPSQKKSRVKINWLKSATKQPSILSKFCSLGKITTNQGVKGQSKENECDPEEDLGK
CESDNTTNGCGLESPGNTVTPVNVNEVKPINKGEEQIGFELVEKLFQGQLVLRTRCLECESLTERREDFQDISVPVQEDELSKVEESSEISPEPKTEMKTLRWAISQFASVERIVGEDKYFCENCHHY
TEAERSLLFDKMPEVITIHLKCFAASGLEFDCYGGGLSKINTPLLTPLKLSLEEWSTKPTNDSYGLFAVVMHSGITISSGHYTASVKVTDLNSLELDKGNFVVDQMCEIGKPEPLNEEEARGVVENYN
DEEVSIRVGGNTQPSKVLNKKNVEAIGLLGGQKSKADYELYNKASNPDKVASTAFAENRNSETSDTTGTHESDRNKESSDQTGINISGFENKISYVVQSLKEYEGKWLLFDDSEVKVTEEKDFLNSLS
PSTSPTSTPYLLFYKKL

hide sequence

RefSeq Acc Id:

XP_003809203 ⟸ XM_003809155

- UniProtKB:

A0A2R8ZZC2 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MPGVIPSESNGLSRGSPSKKNRLSLKFFQKKETKRALDFTDSQENEEKASEYRASEIDQVVPAA
QSSPINCEKRENLLPFVGLNNLGNTCYLNSILQVLYFCPGFKSGVKHLFNIISRKKEALKDEANQKDKGNCKEDSLASYELICSLQSLIISVEQLQASFLLNPEKYTDELATQPRRLLNTLRELNPMY
EGYLQHDAQEVLQCILGNIQETCQLLKKEEVKNVAELPTKVEEIPHPKEEMSGINSMEMDSMRHSEDFKEKLPKGNGKRKSDTEFGNMKKKVKVSKEHQSLEENQRQTRSKRKATSDTLESPPKIIPK
YISENESPRPSQKKSRVKINWLKSATKQPSILSKFCSLGKITTNQGVKGQSKENECDPEEDLGKCESDNTTNGCGLESPGNTVTPVNVNEVKPINKGEEQIGFELVEKLFQGQLVLRTRCLECESLTE
RREDFQDISVPVQEDELSKVEESSEISPEPKTEMKTLRWAISQFASVERIVGEDKYFCENCHHYTEAERSLLFDKMPEVITIHLKCFAASGLEFDCYGGGLSKINTPLLTPLKLSLEEWSTKPTNDSY
GLFAVVMHSGITISSGHYTASVKVTDLNSLELDKGNFVVDQMCEIGKPEPLNEEEARGVVENYNDEEVSIRVGGNTQPSKVLNKKNVEAIGLLGGQKSKADYELYNKASNPDKVASTAFAENRNSETS
DTTGTHESDRNKESSDQTGINISGFENKISYVVQSLKEYEGKWLLFDDSEVKVTEEKDFLNSLSPSTSPTSTPYLLFYKKL

hide sequence

Ensembl Acc Id:

ENSPPAP00000010327 ⟸ ENSPPAT00000032977

RefSeq Acc Id:	XP_054947866 ⟸ XM_055091891
- UniProtKB:	A0A2R8ZZC2 (UniProtKB/TrEMBL)

Protein Domains

USP

Database	Acc Id	Source(s)
Ensembl Genes	ENSPPAG00000028383	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSPPAT00000032977.1	UniProtKB/TrEMBL
Gene3D-CATH	Cysteine proteinases	UniProtKB/TrEMBL
InterPro	Papain-like_cys_pep_sf	UniProtKB/TrEMBL
	Peptidase_C19	UniProtKB/TrEMBL
	Peptidase_C19_UCH	UniProtKB/TrEMBL
	USP1	UniProtKB/TrEMBL
	USP_CS	UniProtKB/TrEMBL
	USP_dom	UniProtKB/TrEMBL
KEGG Report	pps:100982030	UniProtKB/TrEMBL
NCBI Gene	USP1	ENTREZGENE
PANTHER	UBIQUITIN CARBOXYL-TERMINAL HYDROLASE	UniProtKB/TrEMBL
	UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 1	UniProtKB/TrEMBL
Pfam	UCH	UniProtKB/TrEMBL
PROSITE	USP_1	UniProtKB/TrEMBL
	USP_2	UniProtKB/TrEMBL
	USP_3	UniProtKB/TrEMBL
Superfamily-SCOP	SSF54001	UniProtKB/TrEMBL
UniProt	A0A2R8ZZC2	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

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