USP1 (ubiquitin specific peptidase 1)

Gene: USP1 (ubiquitin specific peptidase 1) Canis lupus familiaris

Analyze

Symbol:

USP1

Name:

ubiquitin specific peptidase 1

RGD ID:

12224916

Description:

ENCODES a protein that exhibits peptidase activity (ortholog); INVOLVED IN skeletal system development (ortholog); ASSOCIATED WITH Fanconi anemia (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN cytosol (inferred); nucleoplasm (inferred); nucleus (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

ubiquitin carboxyl-terminal hydrolase 1

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	5	47,655,533 - 47,666,767 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	5	47,656,039 - 47,666,210 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	5	47,709,417 - 47,728,116 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	5	47,832,714 - 47,851,368 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	5	47,839,987 - 47,850,507 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	5	47,787,677 - 47,806,321 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	5	47,734,051 - 47,752,692 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	5	47,996,113 - 48,014,814 (-)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Fanconi anemia (ISO)

genetic disease (ISO)

intellectual disability (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

monoubiquitinated protein deubiquitination (IEA)

positive regulation of receptor signaling pathway via JAK-STAT (IEA)

proteolysis (IEA)

regulation of DNA repair (IEA)

response to UV (IEA)

skeletal system development (IEA,ISO)

Cellular Component

cytosol (IEA)

nucleoplasm (IEA)

nucleus (IEA)

Molecular Function

cysteine-type deubiquitinase activity (IEA)

cysteine-type endopeptidase activity (IEA)

cysteine-type peptidase activity (IEA)

peptidase activity (ISO)

protein binding (ISO)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

USP1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	5	47,655,533 - 47,666,767 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	5	47,656,039 - 47,666,210 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	5	47,709,417 - 47,728,116 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	5	47,832,714 - 47,851,368 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	5	47,839,987 - 47,850,507 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	5	47,787,677 - 47,806,321 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	5	47,734,051 - 47,752,692 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	5	47,996,113 - 48,014,814 (-)	NCBI		UU_Cfam_GSD_1.0

USP1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	62,436,395 - 62,451,804 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	62,436,297 - 62,451,804 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	1	62,902,066 - 62,917,475 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	62,674,563 - 62,690,063 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	1	62,614,699 - 62,629,430	NCBI
Celera	1	61,191,184 - 61,206,684 (+)	NCBI		Celera
Cytogenetic Map	1	p31.3	NCBI
HuRef	1	61,014,014 - 61,029,515 (+)	NCBI		HuRef
CHM1_1	1	63,017,306 - 63,032,808 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	1	62,314,982 - 62,330,391 (+)	NCBI		T2T-CHM13v2.0

Usp1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	4	98,812,047 - 98,823,780 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	4	98,812,047 - 98,823,780 (+)	Ensembl		GRCm39 Ensembl
GRCm38	4	98,923,810 - 98,935,543 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	4	98,923,810 - 98,935,543 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	4	98,590,501 - 98,602,224 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	4	98,415,828 - 98,427,551 (+)	NCBI		MGSCv36	mm8
Celera	4	97,290,878 - 97,302,597 (+)	NCBI		Celera
Cytogenetic Map	4	C6	NCBI
cM Map	4	45.6	NCBI

Usp1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	118,703,056 - 118,714,426 (+)	NCBI		GRCr8
mRatBN7.2	5	113,587,564 - 113,598,934 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	113,587,564 - 113,598,932 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	5	116,161,227 - 116,172,610 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	5	117,886,562 - 117,897,946 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	5	117,949,094 - 117,960,477 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	5	117,583,502 - 117,594,872 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	117,583,502 - 117,594,870 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	5	121,525,009 - 121,536,379 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	5	119,364,515 - 119,375,885 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	5	119,369,740 - 119,381,109 (+)	NCBI
Celera	5	112,151,349 - 112,162,719 (+)	NCBI		Celera
Cytogenetic Map	5	q33	NCBI

Usp1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955423	27,237,003 - 27,251,892 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955423	27,236,242 - 27,254,064 (-)	NCBI	ChiLan1.0	ChiLan1.0

USP1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	164,400,198 - 164,427,944 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	163,549,851 - 163,577,601 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	61,694,775 - 61,710,216 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	63,509,781 - 63,525,446 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	63,510,196 - 63,525,446 (+)	Ensembl	panpan1.1		panPan2

Usp1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405058	75,834,633 - 75,844,494 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936692	148,116 - 159,170 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936692	147,699 - 159,921 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

USP1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	149,970,915 - 149,985,509 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	6	149,971,471 - 149,985,946 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

USP1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	20	70,602,300 - 70,617,280 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	20	70,603,056 - 70,614,069 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666033	46,836,799 - 46,851,713 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Usp1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624742	31,391,022 - 31,399,724 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624742	31,390,279 - 31,399,789 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in USP1
79 total Variants

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	reproductive system	respiratory system	adipose tissue
High
Medium	4		14		6		6		12	8	10	4
Low	1	5	8	6		6		6				2
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005620223	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005620224	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_022418771	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038476129	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038476131	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038476132	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038476133	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038476134	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038476135	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038519699	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038519706	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038537314	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038537316	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038537317	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038537318	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038537319	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038537320	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038601444	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038601445	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038601446	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038601447	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038601448	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038601449	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038666009	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038666010	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038666011	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038666012	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038666013	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038666014	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_847227	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000005	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000063	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000089	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000371	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000005	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCAFT00000029847 ⟹ ENSCAFP00000027739

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	5	47,656,039 - 47,666,210 (-)	Ensembl

RefSeq Acc Id:

ENSCAFT00000046445 ⟹ ENSCAFP00000041869

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	5	47,656,039 - 47,666,210 (-)	Ensembl

RefSeq Acc Id:

ENSCAFT00845009225 ⟹ ENSCAFP00845007255

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	5	47,839,987 - 47,850,507 (-)	Ensembl

RefSeq Acc Id:

XM_005620223 ⟹ XP_005620280

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	5	47,655,533 - 47,666,767 (-)	NCBI
Dog10K_Boxer_Tasha	5	47,716,163 - 47,727,750 (-)	NCBI

Sequence:

show sequence

CCTCGCGCGCGCCCTCAGCGAGGACCCGCGCGAGCTGCCCGTGACGCTGCCTGCGCTGTTTGAA
ACTGCAGAAGAACCCGTTAGGATCTTGGGGAAACTACCGTTCCAGCTGGTTCCGGGGCCCGTGC
GTGCCGGGGGGGCGAGTGGCGGGCGCGAGGCGGCTCCTGCCTGTCGTGTCTCTGCAGCGCGGAG
ACTAGAACCGGCACTTTCGAAGGACGCCACCTCCAATCGCAGTGCTGGCGCGGGCGGAGGCTCA
AACACGGGGGTCCTGAGAATATGATTGATTACAACATCCTTGTATAAATTAATTCTTGTAAACT
CCTTGGGATTTGAAGAGAAAATGCCTGGTGTCATACCTAGTGAAAGTAATGGGCTTTCAAGAGG
TAGCCCGTCAAAGAAAAACAGACTTTCCTTGAAGTTTTTTCAGAAAAAGGAAACTAAGAGAGCC
CTGGATTTCACGGATTCTCAAGAAAATGAAGAAAAGGCTTCTGAATATAGAGGATCTGAAATTG
ATCAAGTTGTCCCTGCAGCACAGTCCTCACCTGTACACTGTGAGAAGAGAGAAAACTTACTACC
CTTTGTGGGACTGAATAATCTCGGCAACACTTGTTACCTTAATAGTATACTTCAGGTATTATAT
TTTTGTCCTGGTTTTAAATCTGGAGTGAAGCACTTATTCAACATTATTTCAAGGAAGAAAGAAG
CCCTAAAAGATGAAGCCAATCAAAAAGATAAGGGAAGTTGCAAAGAAGATTCTTTGGCAAGTTA
TGAACTAATATGCAGTTTACAGTCCTTGATCATTTCAGTTGAACAGCTTCAGGCTAGCTTTCTC
TTAAATCCAGAAAAATACACTGATGAACTTGCTACTCAGCCAAGGCGACTGCTTAACACACTCA
GGGAACTCAACCCTATGTATGAAGGATATCTACAGCATGATGCACAGGAAGTATTACAGTGTAT
TTTGGGAAACATTCAAGAAACATGCCAACTCCTAAAAAAAGAAGAAGTAAAAAATGTGGTAGAA
TTATCTACTAAGATAGAAGAAAAACCTCATCAGAAAGAGGAAATGAGTGGTATTAACAGCATAG
AGATGGACAATCTTAGGCCTTCTGAAGATTATAAAGAAAAACTCCCAAAAGGAAATGGGAAAAG
AAAAAGTGACACTGAATTTGGTAACATGAAGAAAAAAGTTAAAGTATCCAAGGAACACCAGTCA
TTGGAAGAGAACCAGAGACAAACCAGATCAAAAAGGAAAGCTACAGGTGATACGTTAGAGATTC
CTTCTAAAATAATCCCCAAGTGTGTTTCTGAAAATGAAAGTGCAAGACCCTCACAAAAGAAATC
AAGAGTTAAAATAAATTGGTTAAAGCCTGCAACTAAGCAACCCAGCATTCTTTCTAAATTCTGT
AGTCTGGGGAAAATAACAACAAACCAGGGATCCAAAGAACAGTTGAAAGAAAATGAATATGATC
TTGAAGAGGACTTGGGGAAGTGTGAAAATGATAACACAACTAATGGTTGTGAACTTGAATCTCC
AGGGGATAATGTTAAGCCCGTTAATGTTAATGAAGTTAAGCCCATAAACAAAGGTGCAGAGCAA
ATTGGTTTTGAGCTAGTAGAGAAATTATTTCAAGGTCAGCTGGTATTAAGGACTCGTTGCTTAG
AATGTGAAAGTTTAACAGAAAGAAGAGAAGATTTTCAGGACATCAGTGTGCCAGTACAAGAAGA
TGAGCTTTCCAAAGTAGAGGAGAGTTCTGAAATTTCTCCAGAGCCAAAAACAGAAATGAAGACC
CTGAGATGGGCAATTTCACAGTTTGCTTCAGTGGAGAGGATTGTAGGAGAAGATAAATATTTCT
GTGAAAATTGCCATCATTATACTGAAGCCGAACGAAGTCTTTTGTTTGACAAAATGCCTGAAGT
TATAACTATTCATTTGAAGTGCTTTGCTGCTAGTGGCTTGGAGTTTGATTGTTATGGTGGTGGA
CTTTCCAAGATCAACACTCCTTTACTGACACCTCTTAAATTGTCACTAGAAGAATGGAGCACAA
AGCCAACCAACGACAGCTATGGATTATTTGCGGTTGTGATGCACAGTGGCATTACCATCAGTAG
TGGGCATTACACTGCTTCTGTTAAAGTCACCGACCTTAACAGTTTAGAACTAGATAAGGGAAAT
TTTGTCATCGACCAAATGTGTGAAATAGGTAAGCCAGAACCATTGAATGAGGAGGAAGCAAGGG
GTGTGGTTGAAAATTATGATGATGATGAAGTGTCAATTAGAGTTAGTGGAAATACACAGCCAAG
TAAAGTTTTGAACAAAAAAAATGTAGAAGCTATTGGACTTCTTGGAGGACAAAAGAGCAAAGCA
GATTATGAGCTATACAACAAAGCATCTAATCCTGATAAAGTTGCCAGTACAGCATTTGCTGAAA
ATAGAAATTCTGAGACTAACAATACTAATGGGACCCATGAATTTGATACAAACAAAGAATCCAG
TGACCAAACAGGCATTAACTTTAGTGGATTTGAGAACAAAATTTCATGTGTAGTGCAAAGCTTA
AAGGAGTATGAGGGGAAATGGTTACTTTTTGATGATTCTGAAGTGAAAGTTACTGAAGAGAAGG
ACTTTTTGAATTCTCTTTCCCCTTCTACATCTCCTACATCTACTCCTTATTTGCTATTTTATAA
GAAATTATAGAGTATTTTCCTTATGTGTATATTAACAGACCTGGACAAAAGCTGGTAAAGTTGA
TTACATCAAAGAGTCTAGCTTATCTTTTGAAGCTATTGGATATTATTGGTCTCTCTAGGTTTTT
ATATAAATAGTGAAATTTGAATTACTGAAAACCATGTTAATTTTTAGAATTTCCAGTAGTAGAG
ACTAGTGATGCATTAGCTTCTGGGAACAAACTTGTATAGGTTCTTAATTATCCAAATGGAAGCA
TTTAAACACTTTTGAATTTACACCTATCTTTTGTGTTTGCTTTTTAAAATAAAGTGCTTGTATT
TGTATCTCCAGATTTTGGAGTAATTATCTATTTGATGTTTATAGGTCCTGTGGTTTTTCAGCTA
AGAAGCAGAATCTCATTTCAGTACATTTAGTTTTATAAGTCATGAAGCCAGATCTTTAATGGGC
TGTATTTAGAGGCACAAAGTCCTGGGAAATGTGTGTATTCACAGTAGTGTACATTTTGTGCCTT
GAGTCACTTTGAAAAGTGTCTCAGAAAACCTGGACGGCCAGTTCCTTCTATCTTCACAAGAATT
TTATATGTATTTATGAAAATGATTCTGTATTCTAGTAAATCTTTTTGGGCATGGACTAATTTGT
ATCTCTTCATAGTCATATTCTGCACGATCTGTATATAGTATATCAAATTTAGAGGTGTGACCTT
AAATTTAACTTTTTTTTTTTTTAAAACCGGGAGGTCAATAAAATTTAAACTGCTTAACAACTA

hide sequence

RefSeq Acc Id:

XM_005620224 ⟹ XP_005620281

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	5	47,655,533 - 47,666,349 (-)	NCBI
Dog10K_Boxer_Tasha	5	47,716,163 - 47,727,302 (-)	NCBI

Sequence:

show sequence

TGTAGTTGGTGCCGGCGCCGGGCAGCACCGAGCGGCAGCCCGGGTTCCCGCCCCGAGAGCGGGT
GGTCACCCCCCTGCGGGGAGGGCGATCCGGGCAGCTTCTCCCGGGTCGGGGGTGGGGGGCGCGG
CGGGGGCGCGGGCAGGGTCTCACCTGTCGCACCCTCGCACATCCCGGCTGCGCTCGGGGCGTCA
CCGCCGCGGACCTCGCTGTGGGCCATGATCAGATATGATTGATTACAACATCCTTGTATAAATT
AATTCTTGTAAACTCCTTGGGATTTGAAGAGAAAATGCCTGGTGTCATACCTAGTGAAAGTAAT
GGGCTTTCAAGAGGTAGCCCGTCAAAGAAAAACAGACTTTCCTTGAAGTTTTTTCAGAAAAAGG
AAACTAAGAGAGCCCTGGATTTCACGGATTCTCAAGAAAATGAAGAAAAGGCTTCTGAATATAG
AGGATCTGAAATTGATCAAGTTGTCCCTGCAGCACAGTCCTCACCTGTACACTGTGAGAAGAGA
GAAAACTTACTACCCTTTGTGGGACTGAATAATCTCGGCAACACTTGTTACCTTAATAGTATAC
TTCAGGTATTATATTTTTGTCCTGGTTTTAAATCTGGAGTGAAGCACTTATTCAACATTATTTC
AAGGAAGAAAGAAGCCCTAAAAGATGAAGCCAATCAAAAAGATAAGGGAAGTTGCAAAGAAGAT
TCTTTGGCAAGTTATGAACTAATATGCAGTTTACAGTCCTTGATCATTTCAGTTGAACAGCTTC
AGGCTAGCTTTCTCTTAAATCCAGAAAAATACACTGATGAACTTGCTACTCAGCCAAGGCGACT
GCTTAACACACTCAGGGAACTCAACCCTATGTATGAAGGATATCTACAGCATGATGCACAGGAA
GTATTACAGTGTATTTTGGGAAACATTCAAGAAACATGCCAACTCCTAAAAAAAGAAGAAGTAA
AAAATGTGGTAGAATTATCTACTAAGATAGAAGAAAAACCTCATCAGAAAGAGGAAATGAGTGG
TATTAACAGCATAGAGATGGACAATCTTAGGCCTTCTGAAGATTATAAAGAAAAACTCCCAAAA
GGAAATGGGAAAAGAAAAAGTGACACTGAATTTGGTAACATGAAGAAAAAAGTTAAAGTATCCA
AGGAACACCAGTCATTGGAAGAGAACCAGAGACAAACCAGATCAAAAAGGAAAGCTACAGGTGC
AGAGCAAATTGGTTTTGAGCTAGTAGAGAAATTATTTCAAGGTCAGCTGGTATTAAGGACTCGT
TGCTTAGAATGTGAAAGTTTAACAGAAAGAAGAGAAGATTTTCAGGACATCAGTGTGCCAGTAC
AAGAAGATGAGCTTTCCAAAGTAGAGGAGAGTTCTGAAATTTCTCCAGAGCCAAAAACAGAAAT
GAAGACCCTGAGATGGGCAATTTCACAGTTTGCTTCAGTGGAGAGGATTGTAGGAGAAGATAAA
TATTTCTGTGAAAATTGCCATCATTATACTGAAGCCGAACGAAGTCTTTTGTTTGACAAAATGC
CTGAAGTTATAACTATTCATTTGAAGTGCTTTGCTGCTAGTGGCTTGGAGTTTGATTGTTATGG
TGGTGGACTTTCCAAGATCAACACTCCTTTACTGACACCTCTTAAATTGTCACTAGAAGAATGG
AGCACAAAGCCAACCAACGACAGCTATGGATTATTTGCGGTTGTGATGCACAGTGGCATTACCA
TCAGTAGTGGGCATTACACTGCTTCTGTTAAAGTCACCGACCTTAACAGTTTAGAACTAGATAA
GGGAAATTTTGTCATCGACCAAATGTGTGAAATAGGTAAGCCAGAACCATTGAATGAGGAGGAA
GCAAGGGGTGTGGTTGAAAATTATGATGATGATGAAGTGTCAATTAGAGTTAGTGGAAATACAC
AGCCAAGTAAAGTTTTGAACAAAAAAAATGTAGAAGCTATTGGACTTCTTGGAGGACAAAAGAG
CAAAGCAGATTATGAGCTATACAACAAAGCATCTAATCCTGATAAAGTTGCCAGTACAGCATTT
GCTGAAAATAGAAATTCTGAGACTAACAATACTAATGGGACCCATGAATTTGATACAAACAAAG
AATCCAGTGACCAAACAGGCATTAACTTTAGTGGATTTGAGAACAAAATTTCATGTGTAGTGCA
AAGCTTAAAGGAGTATGAGGGGAAATGGTTACTTTTTGATGATTCTGAAGTGAAAGTTACTGAA
GAGAAGGACTTTTTGAATTCTCTTTCCCCTTCTACATCTCCTACATCTACTCCTTATTTGCTAT
TTTATAAGAAATTATAGAGTATTTTCCTTATGTGTATATTAACAGACCTGGACAAAAGCTGGTA
AAGTTGATTACATCAAAGAGTCTAGCTTATCTTTTGAAGCTATTGGATATTATTGGTCTCTCTA
GGTTTTTATATAAATAGTGAAATTTGAATTACTGAAAACCATGTTAATTTTTAGAATTTCCAGT
AGTAGAGACTAGTGATGCATTAGCTTCTGGGAACAAACTTGTATAGGTTCTTAATTATCCAAAT
GGAAGCATTTAAACACTTTTGAATTTACACCTATCTTTTGTGTTTGCTTTTTAAAATAAAGTGC
TTGTATTTGTATCTCCAGATTTTGGAGTAATTATCTATTTGATGTTTATAGGTCCTGTGGTTTT
TCAGCTAAGAAGCAGAATCTCATTTCAGTACATTTAGTTTTATAAGTCATGAAGCCAGATCTTT
AATGGGCTGTATTTAGAGGCACAAAGTCCTGGGAAATGTGTGTATTCACAGTAGTGTACATTTT
GTGCCTTGAGTCACTTTGAAAAGTGTCTCAGAAAACCTGGACGGCCAGTTCCTTCTATCTTCAC
AAGAATTTTATATGTATTTATGAAAATGATTCTGTATTCTAGTAAATCTTTTTGGGCATGGACT
AATTTGTATCTCTTCATAGTCATATTCTGCACGATCTGTATATAGTATATCAAATTTAGAGGTG
TGACCTTAAATTTAACTTTTTTTTTTTTTAAAACCGGGAGGTCAATAAAATTTAAACTGCTTAA
CAACTA

hide sequence

RefSeq Acc Id:

XM_022418771 ⟹ XP_022274479

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	5	47,655,533 - 47,666,349 (-)	NCBI
Dog10K_Boxer_Tasha	5	47,716,163 - 47,727,302 (-)	NCBI

Sequence:

show sequence

TGTAGTTGGTGCCGGCGCCGGGCAGCACCGAGCGGCAGCCCGGGTTCCCGCCCCGAGAGCGGGT
GGTCACCCCCCTGCGGGGAGGGCGATCCGGGCAGCTTCTCCCGGGTCGGGGGTGGGGGGCGCGG
CGGGGGCGCGGGCAGGGTCTCACCTGTCGCACCCTCGCACATCCCGGCTGCGCTCGGGGCGTCA
CCGCCGCGGACCTCGCTGTGGGCCATGATCAGATATGATTGATTACAACATCCTTGTATAAATT
AATTCTTGTAAACTCCTTGGGATTTGAAGAGAAAATGCCTGGTGTCATACCTAGTGAAAGTAAT
GGGCTTTCAAGAGGTAGCCCGTCAAAGAAAAACAGACTTTCCTTGAAGTTTTTTCAGAAAAAGG
AAACTAAGAGAGCCCTGGATTTCACGGATTCTCAAGAAAATGAAGAAAAGGCTTCTGAATATAG
AGGATCTGAAATTGATCAAGTTGTCCCTGCAGCACAGTCCTCACCTGTACACTGTGAGAAGAGA
GAAAACTTACTACCCTTTGTGGGACTGAATAATCTCGGCAACACTTGTTACCTTAATAGTATAC
TTCAGGTATTATATTTTTGTCCTGGTTTTAAATCTGGAGTGAAGCACTTATTCAACATTATTTC
AAGGAAGAAAGAAGCCCTAAAAGATGAAGCCAATCAAAAAGATAAGGGAAGTTGCAAAGAAGAT
TCTTTGGCAAGTTATGAACTAATATGCAGTTTACAGTCCTTGATCATTTCAGTTGAACAGCTTC
AGGCTAGCTTTCTCTTAAATCCAGAAAAATACACTGATGAACTTGCTACTCAGCCAAGGCGACT
GCTTAACACACTCAGGGAACTCAACCCTATGTATGAAGGATATCTACAGCATGATGCACAGGAA
GTATTACAGTGTATTTTGGGAAACATTCAAGAAACATGCCAACTCCTAAAAAAAGAAGAAGTAA
AAAATGTGGTAGAATTATCTACTAAGATAGAAGAAAAACCTCATCAGAAAGAGGAAATGAGTGG
TATTAACAGCATAGAGATGGACAATCTTAGGCCTTCTGAAGATTATAAAGAAAAACTCCCAAAA
GGAAATGGGAAAAGAAAAAGTGACACTGAATTTGGTAACATGAAGAAAAAAGTTAAAGTATCCA
AGGAACACCAGTCATTGGAAGAGAACCAGAGACAAACCAGATCAAAAAGGAAAGCTACAGGTGA
TACGTTAGAGATTCCTTCTAAAATAATCCCCAAGTGTGTTTCTGAAAATGAAAGTGCAAGACCC
TCACAAAAGAAATCAAGAGTTAAAATAAATTGGTTAAAGCCTGCAACTAAGCAACCCAGCATTC
TTTCTAAATTCTGTAGTCTGGGGAAAATAACAACAAACCAGGGATCCAAAGAACAGTTGAAAGA
AAATGAATATGATCTTGAAGAGGACTTGGGGAAGTGTGAAAATGATAACACAACTAATGGTTGT
GAACTTGAATCTCCAGGGGATAATGTTAAGCCCGTTAATGTTAATGAAGTTAAGCCCATAAACA
AAGGTGCAGAGCAAATTGGTTTTGAGCTAGTAGAGAAATTATTTCAAGGTCAGCTGGTATTAAG
GACTCGTTGCTTAGAATGTGAAAGTTTAACAGAAAGAAGAGAAGATTTTCAGGACATCAGTGTG
CCAGTACAAGAAGATGAGCTTTCCAAAGTAGAGGAGAGTTCTGAAATTTCTCCAGAGCCAAAAA
CAGAAATGAAGACCCTGAGATGGGCAATTTCACAGTTTGCTTCAGTGGAGAGGATTGTAGGAGA
AGATAAATATTTCTGTGAAAATTGCCATCATTATACTGAAGCCGAACGAAGTCTTTTGTTTGAC
AAAATGCCTGAAGTTATAACTATTCATTTGAAGTGCTTTGCTGCTAGTGGCTTGGAGTTTGATT
GTTATGGTGGTGGACTTTCCAAGATCAACACTCCTTTACTGACACCTCTTAAATTGTCACTAGA
AGAATGGAGCACAAAGCCAACCAACGACAGCTATGGATTATTTGCGGTTGTGATGCACAGTGGC
ATTACCATCAGTAGTGGGCATTACACTGCTTCTGTTAAAGTCACCGACCTTAACAGTTTAGAAC
TAGATAAGGGAAATTTTGTCATCGACCAAATGTGTGAAATAGGTCCTGTGGTTTTTCAGCTAAG
AAGCAGAATCTCATTTCAGTACATTTAGTTTTATAAGTCATGAAGCCAGATCTTTAATGGGCTG
TATTTAGAGGCACAAAGTCCTGGGAAATGTGTGTATTCACAGTAGTGTACATTTTGTGCCTTGA
GTCACTTTGAAAAGTGTCTCAGAAAACCTGGACGGCCAGTTCCTTCTATCTTCACAAGAATTTT
ATATGTATTTATGAAAATGATTCTGTATTCTAGTAAATCTTTTTGGGCATGGACTAATTTGTAT
CTCTTCATAGTCATATTCTGCACGATCTGTATATAGTATATCAAATTTAGAGGTGTGACCTTAA
ATTTAACTTTTTTTTTTTTTAAAACCGGGAGGTCAATAAAATTTAAACTGCTTAACAACTA

hide sequence

RefSeq Acc Id:

XM_038476129 ⟹ XP_038332057

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	5	47,794,421 - 47,805,508 (-)	NCBI

RefSeq Acc Id:

XM_038476131 ⟹ XP_038332059

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	5	47,794,421 - 47,805,788 (-)	NCBI

RefSeq Acc Id:

XM_038476132 ⟹ XP_038332060

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	5	47,794,421 - 47,806,321 (-)	NCBI

RefSeq Acc Id:

XM_038476133 ⟹ XP_038332061

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	5	47,794,421 - 47,805,508 (-)	NCBI

RefSeq Acc Id:

XM_038476134 ⟹ XP_038332062

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	5	47,787,677 - 47,805,508 (-)	NCBI

RefSeq Acc Id:

XM_038476135 ⟹ XP_038332063

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	5	47,794,421 - 47,805,508 (-)	NCBI

RefSeq Acc Id:

XM_038519699 ⟹ XP_038375627

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	5	47,716,163 - 47,728,116 (-)	NCBI

RefSeq Acc Id:

XM_038519706 ⟹ XP_038375634

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	5	47,709,417 - 47,727,302 (-)	NCBI

RefSeq Acc Id:

XM_038537314 ⟹ XP_038393242

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	5	48,002,859 - 48,013,999 (-)	NCBI

RefSeq Acc Id:

XM_038537316 ⟹ XP_038393244

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	5	48,002,859 - 48,014,279 (-)	NCBI

RefSeq Acc Id:

XM_038537317 ⟹ XP_038393245

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	5	48,002,859 - 48,014,814 (-)	NCBI

RefSeq Acc Id:

XM_038537318 ⟹ XP_038393246

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	5	48,002,859 - 48,013,999 (-)	NCBI

RefSeq Acc Id:

XM_038537319 ⟹ XP_038393247

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	5	47,996,113 - 48,013,999 (-)	NCBI

RefSeq Acc Id:

XM_038537320 ⟹ XP_038393248

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	5	48,002,859 - 48,013,999 (-)	NCBI

RefSeq Acc Id:

XM_038601444 ⟹ XP_038457372

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	5	47,740,796 - 47,751,879 (-)	NCBI

RefSeq Acc Id:

XM_038601445 ⟹ XP_038457373

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	5	47,740,796 - 47,752,159 (-)	NCBI

RefSeq Acc Id:

XM_038601446 ⟹ XP_038457374

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	5	47,740,796 - 47,752,692 (-)	NCBI

RefSeq Acc Id:

XM_038601447 ⟹ XP_038457375

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	5	47,740,796 - 47,751,879 (-)	NCBI

RefSeq Acc Id:

XM_038601448 ⟹ XP_038457376

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	5	47,734,051 - 47,751,879 (-)	NCBI

RefSeq Acc Id:

XM_038601449 ⟹ XP_038457377

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	5	47,740,796 - 47,751,879 (-)	NCBI

RefSeq Acc Id:

XM_038666009 ⟹ XP_038521937

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	5	47,839,463 - 47,850,553 (-)	NCBI

RefSeq Acc Id:

XM_038666010 ⟹ XP_038521938

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	5	47,839,463 - 47,850,833 (-)	NCBI

RefSeq Acc Id:

XM_038666011 ⟹ XP_038521939

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	5	47,839,463 - 47,851,368 (-)	NCBI

RefSeq Acc Id:

XM_038666012 ⟹ XP_038521940

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	5	47,839,463 - 47,850,553 (-)	NCBI

RefSeq Acc Id:

XM_038666013 ⟹ XP_038521941

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	5	47,832,714 - 47,850,553 (-)	NCBI

RefSeq Acc Id:

XM_038666014 ⟹ XP_038521942

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	5	47,839,463 - 47,850,553 (-)	NCBI

RefSeq Acc Id:

XM_847227 ⟹ XP_852320

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	5	47,655,533 - 47,666,349 (-)	NCBI
Dog10K_Boxer_Tasha	5	47,716,163 - 47,727,302 (-)	NCBI

Sequence:

show sequence

TGTAGTTGGTGCCGGCGCCGGGCAGCACCGAGCGGCAGCCCGGGTTCCCGCCCCGAGAGCGGGT
GGTCACCCCCCTGCGGGGAGGGCGATCCGGGCAGCTTCTCCCGGGTCGGGGGTGGGGGGCGCGG
CGGGGGCGCGGGCAGGGTCTCACCTGTCGCACCCTCGCACATCCCGGCTGCGCTCGGGGCGTCA
CCGCCGCGGACCTCGCTGTGGGCCATGATCAGATATGATTGATTACAACATCCTTGTATAAATT
AATTCTTGTAAACTCCTTGGGATTTGAAGAGAAAATGCCTGGTGTCATACCTAGTGAAAGTAAT
GGGCTTTCAAGAGGTAGCCCGTCAAAGAAAAACAGACTTTCCTTGAAGTTTTTTCAGAAAAAGG
AAACTAAGAGAGCCCTGGATTTCACGGATTCTCAAGAAAATGAAGAAAAGGCTTCTGAATATAG
AGGATCTGAAATTGATCAAGTTGTCCCTGCAGCACAGTCCTCACCTGTACACTGTGAGAAGAGA
GAAAACTTACTACCCTTTGTGGGACTGAATAATCTCGGCAACACTTGTTACCTTAATAGTATAC
TTCAGGTATTATATTTTTGTCCTGGTTTTAAATCTGGAGTGAAGCACTTATTCAACATTATTTC
AAGGAAGAAAGAAGCCCTAAAAGATGAAGCCAATCAAAAAGATAAGGGAAGTTGCAAAGAAGAT
TCTTTGGCAAGTTATGAACTAATATGCAGTTTACAGTCCTTGATCATTTCAGTTGAACAGCTTC
AGGCTAGCTTTCTCTTAAATCCAGAAAAATACACTGATGAACTTGCTACTCAGCCAAGGCGACT
GCTTAACACACTCAGGGAACTCAACCCTATGTATGAAGGATATCTACAGCATGATGCACAGGAA
GTATTACAGTGTATTTTGGGAAACATTCAAGAAACATGCCAACTCCTAAAAAAAGAAGAAGTAA
AAAATGTGGTAGAATTATCTACTAAGATAGAAGAAAAACCTCATCAGAAAGAGGAAATGAGTGG
TATTAACAGCATAGAGATGGACAATCTTAGGCCTTCTGAAGATTATAAAGAAAAACTCCCAAAA
GGAAATGGGAAAAGAAAAAGTGACACTGAATTTGGTAACATGAAGAAAAAAGTTAAAGTATCCA
AGGAACACCAGTCATTGGAAGAGAACCAGAGACAAACCAGATCAAAAAGGAAAGCTACAGGTGA
TACGTTAGAGATTCCTTCTAAAATAATCCCCAAGTGTGTTTCTGAAAATGAAAGTGCAAGACCC
TCACAAAAGAAATCAAGAGTTAAAATAAATTGGTTAAAGCCTGCAACTAAGCAACCCAGCATTC
TTTCTAAATTCTGTAGTCTGGGGAAAATAACAACAAACCAGGGATCCAAAGAACAGTTGAAAGA
AAATGAATATGATCTTGAAGAGGACTTGGGGAAGTGTGAAAATGATAACACAACTAATGGTTGT
GAACTTGAATCTCCAGGGGATAATGTTAAGCCCGTTAATGTTAATGAAGTTAAGCCCATAAACA
AAGGTGCAGAGCAAATTGGTTTTGAGCTAGTAGAGAAATTATTTCAAGGTCAGCTGGTATTAAG
GACTCGTTGCTTAGAATGTGAAAGTTTAACAGAAAGAAGAGAAGATTTTCAGGACATCAGTGTG
CCAGTACAAGAAGATGAGCTTTCCAAAGTAGAGGAGAGTTCTGAAATTTCTCCAGAGCCAAAAA
CAGAAATGAAGACCCTGAGATGGGCAATTTCACAGTTTGCTTCAGTGGAGAGGATTGTAGGAGA
AGATAAATATTTCTGTGAAAATTGCCATCATTATACTGAAGCCGAACGAAGTCTTTTGTTTGAC
AAAATGCCTGAAGTTATAACTATTCATTTGAAGTGCTTTGCTGCTAGTGGCTTGGAGTTTGATT
GTTATGGTGGTGGACTTTCCAAGATCAACACTCCTTTACTGACACCTCTTAAATTGTCACTAGA
AGAATGGAGCACAAAGCCAACCAACGACAGCTATGGATTATTTGCGGTTGTGATGCACAGTGGC
ATTACCATCAGTAGTGGGCATTACACTGCTTCTGTTAAAGTCACCGACCTTAACAGTTTAGAAC
TAGATAAGGGAAATTTTGTCATCGACCAAATGTGTGAAATAGGTAAGCCAGAACCATTGAATGA
GGAGGAAGCAAGGGGTGTGGTTGAAAATTATGATGATGATGAAGTGTCAATTAGAGTTAGTGGA
AATACACAGCCAAGTAAAGTTTTGAACAAAAAAAATGTAGAAGCTATTGGACTTCTTGGAGGAC
AAAAGAGCAAAGCAGATTATGAGCTATACAACAAAGCATCTAATCCTGATAAAGTTGCCAGTAC
AGCATTTGCTGAAAATAGAAATTCTGAGACTAACAATACTAATGGGACCCATGAATTTGATACA
AACAAAGAATCCAGTGACCAAACAGGCATTAACTTTAGTGGATTTGAGAACAAAATTTCATGTG
TAGTGCAAAGCTTAAAGGAGTATGAGGGGAAATGGTTACTTTTTGATGATTCTGAAGTGAAAGT
TACTGAAGAGAAGGACTTTTTGAATTCTCTTTCCCCTTCTACATCTCCTACATCTACTCCTTAT
TTGCTATTTTATAAGAAATTATAGAGTATTTTCCTTATGTGTATATTAACAGACCTGGACAAAA
GCTGGTAAAGTTGATTACATCAAAGAGTCTAGCTTATCTTTTGAAGCTATTGGATATTATTGGT
CTCTCTAGGTTTTTATATAAATAGTGAAATTTGAATTACTGAAAACCATGTTAATTTTTAGAAT
TTCCAGTAGTAGAGACTAGTGATGCATTAGCTTCTGGGAACAAACTTGTATAGGTTCTTAATTA
TCCAAATGGAAGCATTTAAACACTTTTGAATTTACACCTATCTTTTGTGTTTGCTTTTTAAAAT
AAAGTGCTTGTATTTGTATCTCCAGATTTTGGAGTAATTATCTATTTGATGTTTATAGGTCCTG
TGGTTTTTCAGCTAAGAAGCAGAATCTCATTTCAGTACATTTAGTTTTATAAGTCATGAAGCCA
GATCTTTAATGGGCTGTATTTAGAGGCACAAAGTCCTGGGAAATGTGTGTATTCACAGTAGTGT
ACATTTTGTGCCTTGAGTCACTTTGAAAAGTGTCTCAGAAAACCTGGACGGCCAGTTCCTTCTA
TCTTCACAAGAATTTTATATGTATTTATGAAAATGATTCTGTATTCTAGTAAATCTTTTTGGGC
ATGGACTAATTTGTATCTCTTCATAGTCATATTCTGCACGATCTGTATATAGTATATCAAATTT
AGAGGTGTGACCTTAAATTTAACTTTTTTTTTTTTTAAAACCGGGAGGTCAATAAAATTTAAAC
TGCTTAACAACTA

hide sequence

Protein Sequences


Protein RefSeqs	XP_005620280	(Get FASTA)	NCBI Sequence Viewer
	XP_005620281	(Get FASTA)	NCBI Sequence Viewer
	XP_022274479	(Get FASTA)	NCBI Sequence Viewer
	XP_038332057	(Get FASTA)	NCBI Sequence Viewer
	XP_038332059	(Get FASTA)	NCBI Sequence Viewer
	XP_038332060	(Get FASTA)	NCBI Sequence Viewer
	XP_038332061	(Get FASTA)	NCBI Sequence Viewer
	XP_038332062	(Get FASTA)	NCBI Sequence Viewer
	XP_038332063	(Get FASTA)	NCBI Sequence Viewer
	XP_038375627	(Get FASTA)	NCBI Sequence Viewer
	XP_038375634	(Get FASTA)	NCBI Sequence Viewer
	XP_038393242	(Get FASTA)	NCBI Sequence Viewer
	XP_038393244	(Get FASTA)	NCBI Sequence Viewer
	XP_038393245	(Get FASTA)	NCBI Sequence Viewer
	XP_038393246	(Get FASTA)	NCBI Sequence Viewer
	XP_038393247	(Get FASTA)	NCBI Sequence Viewer
	XP_038393248	(Get FASTA)	NCBI Sequence Viewer
	XP_038457372	(Get FASTA)	NCBI Sequence Viewer
	XP_038457373	(Get FASTA)	NCBI Sequence Viewer
	XP_038457374	(Get FASTA)	NCBI Sequence Viewer
	XP_038457375	(Get FASTA)	NCBI Sequence Viewer
	XP_038457376	(Get FASTA)	NCBI Sequence Viewer
	XP_038457377	(Get FASTA)	NCBI Sequence Viewer
	XP_038521937	(Get FASTA)	NCBI Sequence Viewer
	XP_038521938	(Get FASTA)	NCBI Sequence Viewer
	XP_038521939	(Get FASTA)	NCBI Sequence Viewer
	XP_038521940	(Get FASTA)	NCBI Sequence Viewer
	XP_038521941	(Get FASTA)	NCBI Sequence Viewer
	XP_038521942	(Get FASTA)	NCBI Sequence Viewer
	XP_852320	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000027739.3
	ENSCAFP00030000829.1
	ENSCAFP00030000841.1
	ENSCAFP00040023725.1
	ENSCAFP00040023788.1
	ENSCAFP00845007255
	ENSCAFP00845007255.1

RefSeq Acc Id:	XP_005620280 ⟸ XM_005620223
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0SPV6 (UniProtKB/TrEMBL), A0A8C0R0A6 (UniProtKB/TrEMBL), A0A8I3RSI1 (UniProtKB/TrEMBL), A0A8C0SMA6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPGVIPSESNGLSRGSPSKKNRLSLKFFQKKETKRALDFTDSQENEEKASEYRGSEIDQVVPAA QSSPVHCEKRENLLPFVGLNNLGNTCYLNSILQVLYFCPGFKSGVKHLFNIISRKKEALKDEAN QKDKGSCKEDSLASYELICSLQSLIISVEQLQASFLLNPEKYTDELATQPRRLLNTLRELNPMY EGYLQHDAQEVLQCILGNIQETCQLLKKEEVKNVVELSTKIEEKPHQKEEMSGINSIEMDNLRP SEDYKEKLPKGNGKRKSDTEFGNMKKKVKVSKEHQSLEENQRQTRSKRKATGDTLEIPSKIIPK CVSENESARPSQKKSRVKINWLKPATKQPSILSKFCSLGKITTNQGSKEQLKENEYDLEEDLGK CENDNTTNGCELESPGDNVKPVNVNEVKPINKGAEQIGFELVEKLFQGQLVLRTRCLECESLTE RREDFQDISVPVQEDELSKVEESSEISPEPKTEMKTLRWAISQFASVERIVGEDKYFCENCHHY TEAERSLLFDKMPEVITIHLKCFAASGLEFDCYGGGLSKINTPLLTPLKLSLEEWSTKPTNDSY GLFAVVMHSGITISSGHYTASVKVTDLNSLELDKGNFVIDQMCEIGKPEPLNEEEARGVVENYD DDEVSIRVSGNTQPSKVLNKKNVEAIGLLGGQKSKADYELYNKASNPDKVASTAFAENRNSETN NTNGTHEFDTNKESSDQTGINFSGFENKISCVVQSLKEYEGKWLLFDDSEVKVTEEKDFLNSLS PSTSPTSTPYLLFYKKL hide sequence

RefSeq Acc Id:	XP_005620281 ⟸ XM_005620224
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0SMA6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPGVIPSESNGLSRGSPSKKNRLSLKFFQKKETKRALDFTDSQENEEKASEYRGSEIDQVVPAA QSSPVHCEKRENLLPFVGLNNLGNTCYLNSILQVLYFCPGFKSGVKHLFNIISRKKEALKDEAN QKDKGSCKEDSLASYELICSLQSLIISVEQLQASFLLNPEKYTDELATQPRRLLNTLRELNPMY EGYLQHDAQEVLQCILGNIQETCQLLKKEEVKNVVELSTKIEEKPHQKEEMSGINSIEMDNLRP SEDYKEKLPKGNGKRKSDTEFGNMKKKVKVSKEHQSLEENQRQTRSKRKATGAEQIGFELVEKL FQGQLVLRTRCLECESLTERREDFQDISVPVQEDELSKVEESSEISPEPKTEMKTLRWAISQFA SVERIVGEDKYFCENCHHYTEAERSLLFDKMPEVITIHLKCFAASGLEFDCYGGGLSKINTPLL TPLKLSLEEWSTKPTNDSYGLFAVVMHSGITISSGHYTASVKVTDLNSLELDKGNFVIDQMCEI GKPEPLNEEEARGVVENYDDDEVSIRVSGNTQPSKVLNKKNVEAIGLLGGQKSKADYELYNKAS NPDKVASTAFAENRNSETNNTNGTHEFDTNKESSDQTGINFSGFENKISCVVQSLKEYEGKWLL FDDSEVKVTEEKDFLNSLSPSTSPTSTPYLLFYKKL hide sequence

RefSeq Acc Id:	XP_852320 ⟸ XM_847227
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0SPV6 (UniProtKB/TrEMBL), A0A8C0R0A6 (UniProtKB/TrEMBL), A0A8I3RSI1 (UniProtKB/TrEMBL), A0A8C0SMA6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPGVIPSESNGLSRGSPSKKNRLSLKFFQKKETKRALDFTDSQENEEKASEYRGSEIDQVVPAA QSSPVHCEKRENLLPFVGLNNLGNTCYLNSILQVLYFCPGFKSGVKHLFNIISRKKEALKDEAN QKDKGSCKEDSLASYELICSLQSLIISVEQLQASFLLNPEKYTDELATQPRRLLNTLRELNPMY EGYLQHDAQEVLQCILGNIQETCQLLKKEEVKNVVELSTKIEEKPHQKEEMSGINSIEMDNLRP SEDYKEKLPKGNGKRKSDTEFGNMKKKVKVSKEHQSLEENQRQTRSKRKATGDTLEIPSKIIPK CVSENESARPSQKKSRVKINWLKPATKQPSILSKFCSLGKITTNQGSKEQLKENEYDLEEDLGK CENDNTTNGCELESPGDNVKPVNVNEVKPINKGAEQIGFELVEKLFQGQLVLRTRCLECESLTE RREDFQDISVPVQEDELSKVEESSEISPEPKTEMKTLRWAISQFASVERIVGEDKYFCENCHHY TEAERSLLFDKMPEVITIHLKCFAASGLEFDCYGGGLSKINTPLLTPLKLSLEEWSTKPTNDSY GLFAVVMHSGITISSGHYTASVKVTDLNSLELDKGNFVIDQMCEIGKPEPLNEEEARGVVENYD DDEVSIRVSGNTQPSKVLNKKNVEAIGLLGGQKSKADYELYNKASNPDKVASTAFAENRNSETN NTNGTHEFDTNKESSDQTGINFSGFENKISCVVQSLKEYEGKWLLFDDSEVKVTEEKDFLNSLS PSTSPTSTPYLLFYKKL hide sequence

RefSeq Acc Id:

XP_022274479 ⟸ XM_022418771

- Peptide Label:

isoform X4

- Sequence:

show sequence

MPGVIPSESNGLSRGSPSKKNRLSLKFFQKKETKRALDFTDSQENEEKASEYRGSEIDQVVPAA
QSSPVHCEKRENLLPFVGLNNLGNTCYLNSILQVLYFCPGFKSGVKHLFNIISRKKEALKDEAN
QKDKGSCKEDSLASYELICSLQSLIISVEQLQASFLLNPEKYTDELATQPRRLLNTLRELNPMY
EGYLQHDAQEVLQCILGNIQETCQLLKKEEVKNVVELSTKIEEKPHQKEEMSGINSIEMDNLRP
SEDYKEKLPKGNGKRKSDTEFGNMKKKVKVSKEHQSLEENQRQTRSKRKATGDTLEIPSKIIPK
CVSENESARPSQKKSRVKINWLKPATKQPSILSKFCSLGKITTNQGSKEQLKENEYDLEEDLGK
CENDNTTNGCELESPGDNVKPVNVNEVKPINKGAEQIGFELVEKLFQGQLVLRTRCLECESLTE
RREDFQDISVPVQEDELSKVEESSEISPEPKTEMKTLRWAISQFASVERIVGEDKYFCENCHHY
TEAERSLLFDKMPEVITIHLKCFAASGLEFDCYGGGLSKINTPLLTPLKLSLEEWSTKPTNDSY
GLFAVVMHSGITISSGHYTASVKVTDLNSLELDKGNFVIDQMCEIGPVVFQLRSRISFQYI

hide sequence

RefSeq Acc Id:

ENSCAFP00000027739 ⟸ ENSCAFT00000029847

RefSeq Acc Id:

ENSCAFP00000041869 ⟸ ENSCAFT00000046445

RefSeq Acc Id:	XP_038332062 ⟸ XM_038476134
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038332060 ⟸ XM_038476132
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038332059 ⟸ XM_038476131
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038332061 ⟸ XM_038476133
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038332063 ⟸ XM_038476135
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_038332057 ⟸ XM_038476129
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038457376 ⟸ XM_038601448
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038457374 ⟸ XM_038601446
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038457373 ⟸ XM_038601445
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038457375 ⟸ XM_038601447
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038457377 ⟸ XM_038601449
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_038457372 ⟸ XM_038601444
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038521941 ⟸ XM_038666013
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038521939 ⟸ XM_038666011
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0SPV6 (UniProtKB/TrEMBL), A0A8C0R0A6 (UniProtKB/TrEMBL), A0A8I3RSI1 (UniProtKB/TrEMBL), A0A8C0SMA6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038521938 ⟸ XM_038666010
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0SPV6 (UniProtKB/TrEMBL), A0A8C0R0A6 (UniProtKB/TrEMBL), A0A8I3RSI1 (UniProtKB/TrEMBL), A0A8C0SMA6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038521940 ⟸ XM_038666012
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0SMA6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038521942 ⟸ XM_038666014
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_038521937 ⟸ XM_038666009
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0SPV6 (UniProtKB/TrEMBL), A0A8C0R0A6 (UniProtKB/TrEMBL), A0A8I3RSI1 (UniProtKB/TrEMBL), A0A8C0SMA6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038375634 ⟸ XM_038519706
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038375627 ⟸ XM_038519699
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0SPV6 (UniProtKB/TrEMBL), A0A8C0R0A6 (UniProtKB/TrEMBL), A0A8I3RSI1 (UniProtKB/TrEMBL), A0A8C0SMA6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038393247 ⟸ XM_038537319
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038393245 ⟸ XM_038537317
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0R0A6 (UniProtKB/TrEMBL), A0A8C0SMA6 (UniProtKB/TrEMBL), A0A8C0SPV6 (UniProtKB/TrEMBL), A0A8I3RSI1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038393244 ⟸ XM_038537316
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0R0A6 (UniProtKB/TrEMBL), A0A8C0SMA6 (UniProtKB/TrEMBL), A0A8C0SPV6 (UniProtKB/TrEMBL), A0A8I3RSI1 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038393246 ⟸ XM_038537318
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0SMA6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038393248 ⟸ XM_038537320
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_038393242 ⟸ XM_038537314
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0R0A6 (UniProtKB/TrEMBL), A0A8C0SMA6 (UniProtKB/TrEMBL), A0A8C0SPV6 (UniProtKB/TrEMBL), A0A8I3RSI1 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSCAFP00845007255 ⟸ ENSCAFT00845009225

Protein Domains

USP

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000018804	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00030000582	UniProtKB/TrEMBL
	ENSCAFG00040014814	UniProtKB/TrEMBL
	ENSCAFG00845005152	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000029847.5	UniProtKB/TrEMBL
	ENSCAFT00030000957.1	UniProtKB/TrEMBL
	ENSCAFT00030000973.1	UniProtKB/TrEMBL
	ENSCAFT00040027300.1	UniProtKB/TrEMBL
	ENSCAFT00040027378.1	UniProtKB/TrEMBL
	ENSCAFT00845009225	ENTREZGENE
	ENSCAFT00845009225.1	UniProtKB/TrEMBL
Gene3D-CATH	Cysteine proteinases	UniProtKB/TrEMBL
InterPro	Papain-like_cys_pep_sf	UniProtKB/TrEMBL
	Peptidase_C19_UCH	UniProtKB/TrEMBL
	USP1	UniProtKB/TrEMBL
	USP_CS	UniProtKB/TrEMBL
	USP_dom	UniProtKB/TrEMBL
KEGG Report	cfa:479549	UniProtKB/TrEMBL
NCBI Gene	USP1	ENTREZGENE
PANTHER	UBIQUITIN CARBOXYL-TERMINAL HYDROLASE	UniProtKB/TrEMBL
	UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 1	UniProtKB/TrEMBL
Pfam	UCH	UniProtKB/TrEMBL
PROSITE	USP_1	UniProtKB/TrEMBL
	USP_2	UniProtKB/TrEMBL
	USP_3	UniProtKB/TrEMBL
Superfamily-SCOP	SSF54001	UniProtKB/TrEMBL
UniProt	A0A8C0R0A6	ENTREZGENE
	A0A8C0SMA6	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0SPV6	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3RSI1	ENTREZGENE, UniProtKB/TrEMBL
VGNC ID	VGNC:48177	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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