MAP4K3 (mitogen-activated protein kinase kinase kinase kinase 3) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: MAP4K3 (mitogen-activated protein kinase kinase kinase kinase 3) Pan paniscus
Analyze
Symbol: MAP4K3
Name: mitogen-activated protein kinase kinase kinase kinase 3
RGD ID: 11776248
Description: ENCODES a protein that exhibits SH3 domain binding (ortholog); INVOLVED IN protein phosphorylation (ortholog); PARTICIPATES IN tumor necrosis factor mediated signaling pathway; ASSOCIATED WITH high grade glioma (ortholog); Lynch syndrome (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN cytoplasm (inferred)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21287,032,042 - 87,220,052 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12A87,036,010 - 87,224,027 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02A39,286,787 - 39,474,780 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12A40,040,492 - 40,228,109 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2A40,040,497 - 40,228,109 (-)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoplasm  (IEA)

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
MAP4K3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21287,032,042 - 87,220,052 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12A87,036,010 - 87,224,027 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02A39,286,787 - 39,474,780 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12A40,040,492 - 40,228,109 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2A40,040,497 - 40,228,109 (-)Ensemblpanpan1.1panPan2
MAP4K3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38239,249,266 - 39,437,285 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl239,249,266 - 39,437,301 (-)EnsemblGRCh38hg38GRCh38
GRCh37239,476,407 - 39,664,426 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36239,329,926 - 39,517,723 (-)NCBINCBI36Build 36hg18NCBI36
Build 34239,388,073 - 39,575,870NCBI
Celera239,317,367 - 39,505,201 (-)NCBICelera
Cytogenetic Map2p22.1NCBI
HuRef239,215,530 - 39,403,591 (-)NCBIHuRef
CHM1_1239,406,810 - 39,594,778 (-)NCBICHM1_1
T2T-CHM13v2.0239,258,084 - 39,446,168 (-)NCBIT2T-CHM13v2.0
Map4k3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391780,887,942 - 81,039,118 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1780,887,941 - 81,035,914 (-)EnsemblGRCm39 Ensembl
GRCm381780,580,513 - 80,728,806 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1780,580,512 - 80,728,485 (-)EnsemblGRCm38mm10GRCm38
MGSCv371780,979,852 - 81,127,433 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361780,488,838 - 80,636,419 (-)NCBIMGSCv36mm8
MGSCv361779,860,491 - 80,008,566 (-)NCBIMGSCv36mm8
Celera1784,897,744 - 85,059,626 (-)NCBICelera
Cytogenetic Map17E3NCBI
cM Map1750.97NCBI
Map4k3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8620,029,246 - 20,198,583 (+)NCBIGRCr8
mRatBN7.2614,276,623 - 14,446,321 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl614,277,121 - 14,446,334 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx614,582,521 - 14,745,689 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0614,897,736 - 15,066,918 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0614,393,979 - 14,563,171 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.063,276,732 - 3,444,519 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl63,276,738 - 3,444,519 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.063,247,181 - 3,414,716 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.463,473,694 - 3,642,461 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.163,475,028 - 3,642,293 (-)NCBI
Celera613,956,412 - 14,123,546 (+)NCBICelera
Cytogenetic Map6q12NCBI
Map4k3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554416,846,719 - 6,956,418 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554416,843,066 - 6,956,443 (-)NCBIChiLan1.0ChiLan1.0
MAP4K3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11731,253,632 - 31,439,148 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1731,254,941 - 31,439,118 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1731,006,278 - 31,200,097 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01731,910,677 - 32,098,182 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1731,910,926 - 32,098,323 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11731,131,531 - 31,319,037 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01731,201,764 - 31,389,216 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01731,415,443 - 31,602,890 (-)NCBIUU_Cfam_GSD_1.0
Map4k3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440629240,456,473 - 40,633,948 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493650811,884,684 - 12,064,066 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493650811,885,066 - 12,062,560 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MAP4K3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl3100,887,143 - 101,084,677 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.13100,887,148 - 101,084,667 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
MAP4K3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11467,931,906 - 68,121,640 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1467,931,940 - 68,122,556 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604543,860,848 - 43,989,643 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Map4k3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473820,715,296 - 20,875,393 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473820,716,430 - 20,874,930 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSPPAT00000036586   ⟹   ENSPPAP00000013911
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl2A40,040,497 - 40,228,109 (-)Ensembl
Ensembl Acc Id: ENSPPAT00000036591   ⟹   ENSPPAP00000013916
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl2A40,040,497 - 40,228,109 (-)Ensembl
Ensembl Acc Id: ENSPPAT00000036597   ⟹   ENSPPAP00000013922
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl2A40,041,844 - 40,147,892 (-)Ensembl
Ensembl Acc Id: ENSPPAT00000036602   ⟹   ENSPPAP00000013927
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl2A40,117,108 - 40,227,972 (-)Ensembl
RefSeq Acc Id: XM_003817628   ⟹   XP_003817676
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21287,032,179 - 87,220,052 (+)NCBI
NHGRI_mPanPan12A87,036,010 - 87,224,027 (+)NCBI
Mhudiblu_PPA_v02A39,286,787 - 39,474,780 (-)NCBI
PanPan1.12A40,040,497 - 40,228,109 (-)NCBI
Sequence:
RefSeq Acc Id: XM_003817629   ⟹   XP_003817677
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21287,032,179 - 87,220,052 (+)NCBI
NHGRI_mPanPan12A87,036,010 - 87,224,027 (+)NCBI
Mhudiblu_PPA_v02A39,286,787 - 39,474,764 (-)NCBI
PanPan1.12A40,040,497 - 40,228,109 (-)NCBI
Sequence:
RefSeq Acc Id: XM_034952985   ⟹   XP_034808876
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21287,032,042 - 87,220,052 (+)NCBI
NHGRI_mPanPan12A87,036,045 - 87,224,027 (+)NCBI
Mhudiblu_PPA_v02A39,286,787 - 39,474,513 (-)NCBI
RefSeq Acc Id: XM_034952986   ⟹   XP_034808877
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21287,032,042 - 87,220,052 (+)NCBI
NHGRI_mPanPan12A87,036,046 - 87,224,027 (+)NCBI
Mhudiblu_PPA_v02A39,286,787 - 39,474,513 (-)NCBI
RefSeq Acc Id: XM_034952987   ⟹   XP_034808878
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21287,032,179 - 87,220,052 (+)NCBI
NHGRI_mPanPan12A87,036,265 - 87,224,027 (+)NCBI
Mhudiblu_PPA_v02A39,286,787 - 39,474,504 (-)NCBI
RefSeq Acc Id: XR_004669789
Type: NON-CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21287,032,042 - 87,218,646 (+)NCBI
NHGRI_mPanPan12A87,036,036 - 87,222,621 (+)NCBI
Mhudiblu_PPA_v02A39,288,131 - 39,474,513 (-)NCBI
RefSeq Acc Id: XP_003817676   ⟸   XM_003817628
- Peptide Label: isoform X4
- UniProtKB: A0A2R9AAI7 (UniProtKB/TrEMBL),   A0A2R9AEV1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_003817677   ⟸   XM_003817629
- Peptide Label: isoform X2
- UniProtKB: A0A2R9AAI2 (UniProtKB/TrEMBL),   A0A2R9AEV1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_034808877   ⟸   XM_034952986
- Peptide Label: isoform X3
- UniProtKB: A0A2R9AEV1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_034808876   ⟸   XM_034952985
- Peptide Label: isoform X1
- UniProtKB: A0A2R9AEV1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_034808878   ⟸   XM_034952987
- Peptide Label: isoform X5
- UniProtKB: A0A2R9AEV1 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSPPAP00000013922   ⟸   ENSPPAT00000036597
Ensembl Acc Id: ENSPPAP00000013916   ⟸   ENSPPAT00000036591
Ensembl Acc Id: ENSPPAP00000013911   ⟸   ENSPPAT00000036586
Ensembl Acc Id: ENSPPAP00000013927   ⟸   ENSPPAT00000036602
Protein Domains
CNH   Protein kinase


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000030086 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000036586.1 UniProtKB/TrEMBL
  ENSPPAT00000036591.1 UniProtKB/TrEMBL
  ENSPPAT00000036597.1 UniProtKB/TrEMBL
  ENSPPAT00000036602.1 UniProtKB/TrEMBL
Gene3D-CATH Transferase(Phosphotransferase) domain 1 UniProtKB/TrEMBL
InterPro CNH_dom UniProtKB/TrEMBL
  Kinase-like_dom_sf UniProtKB/TrEMBL
  MAPKKKK UniProtKB/TrEMBL
  Prot_kinase_dom UniProtKB/TrEMBL
  Protein_kinase_ATP_BS UniProtKB/TrEMBL
  STE20/SPS1-PAK UniProtKB/TrEMBL
KEGG Report pps:100971346 UniProtKB/TrEMBL
NCBI Gene MAP4K3 ENTREZGENE
PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE KINASE 3 UniProtKB/TrEMBL
  STERILE20-LIKE KINASE, ISOFORM B-RELATED UniProtKB/TrEMBL
Pfam CNH UniProtKB/TrEMBL
  Pkinase UniProtKB/TrEMBL
PIRSF MAPKKKK UniProtKB/TrEMBL
PROSITE CNH UniProtKB/TrEMBL
  PROTEIN_KINASE_ATP UniProtKB/TrEMBL
  PROTEIN_KINASE_DOM UniProtKB/TrEMBL
SMART CNH UniProtKB/TrEMBL
  S_TKc UniProtKB/TrEMBL
Superfamily-SCOP SSF56112 UniProtKB/TrEMBL
UniProt A0A2R9AAI2 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R9AAI7 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R9AEV1 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R9AEV5_PANPA UniProtKB/TrEMBL