SDC4 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 21 | 51,058,899 - 51,082,046 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 20 | 51,052,007 - 51,075,147 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 20 | 41,656,406 - 41,679,549 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 20 | 42,746,597 - 42,769,736 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 20 | 42,746,281 - 42,769,737 (-) | Ensembl | panpan1.1 | | panPan2 | |
|
SDC4 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 20 | 45,325,288 - 45,348,424 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 20 | 45,325,288 - 45,348,424 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 20 | 43,953,928 - 43,977,064 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 20 | 43,387,342 - 43,410,478 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 20 | 43,387,343 - 43,410,478 | NCBI | | | | | Celera | 20 | 40,662,456 - 40,685,588 (-) | NCBI | | Celera | | | Cytogenetic Map | 20 | q13.12 | NCBI | | | | | HuRef | 20 | 40,695,444 - 40,718,573 (-) | NCBI | | HuRef | | | CHM1_1 | 20 | 43,856,488 - 43,879,617 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 20 | 47,061,165 - 47,084,301 (-) | NCBI | | T2T-CHM13v2.0 | | |
|
Sdc4 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 2 | 164,266,167 - 164,285,512 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 2 | 164,266,167 - 164,285,807 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 2 | 164,424,247 - 164,443,188 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 2 | 164,424,247 - 164,443,887 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 2 | 164,249,747 - 164,268,688 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 2 | 164,115,452 - 164,134,393 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 2 | 170,361,365 - 170,380,306 (-) | NCBI | | Celera | | | Cytogenetic Map | 2 | H3 | NCBI | | | | | cM Map | 2 | 85.16 | NCBI | | | | |
|
Sdc4 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 3 | 173,574,239 - 173,592,923 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 3 | 153,154,888 - 153,173,576 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 3 | 153,154,896 - 153,173,580 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 3 | 156,965,401 - 156,984,064 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 3 | 165,464,353 - 165,483,016 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 3 | 163,208,020 - 163,226,682 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 3 | 160,872,503 - 160,891,190 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 3 | 160,872,503 - 160,891,190 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 3 | 167,052,789 - 167,071,476 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 3 | 155,446,138 - 155,464,825 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 3 | 155,352,182 - 155,370,861 (-) | NCBI | | | | | Celera | 3 | 151,766,226 - 151,784,912 (-) | NCBI | | Celera | | | Cytogenetic Map | 3 | q42 | NCBI | | | | |
|
Sdc4 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955445 | 11,990,792 - 12,011,553 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955445 | 11,990,916 - 12,009,178 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
|
SDC4 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 24 | 32,628,704 - 32,648,809 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 24 | 32,630,437 - 32,649,114 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 24 | 32,273,638 - 32,293,743 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 24 | 33,339,093 - 33,359,207 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 24 | 33,339,093 - 33,359,179 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 24 | 32,600,350 - 32,620,457 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 24 | 32,715,919 - 32,736,026 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 24 | 33,259,679 - 33,280,258 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
|
Sdc4 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024408640 | 192,074,895 - 192,108,750 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936514 | 7,555,685 - 7,562,391 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936514 | 7,528,538 - 7,562,391 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
|
SDC4 (Sus scrofa - pig) |
|
SDC4 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 2 | 18,490,474 - 18,513,329 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 2 | 18,490,485 - 18,513,332 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666050 | 67,132,278 - 67,155,156 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
|
Sdc4 (Heterocephalus glaber - naked mole-rat) |
|