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Gene: LRRC32 (leucine rich repeat containing 32) Pan paniscus

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Symbol:

LRRC32

Name:

leucine rich repeat containing 32

RGD ID:

11687074

Description:

ENCODES a protein that exhibits receptor ligand inhibitor activity (inferred); transforming growth factor beta binding (inferred); INVOLVED IN negative regulation of activated T cell proliferation (ortholog); negative regulation of cytokine production (ortholog); positive regulation of gene expression (ortholog); ASSOCIATED WITH Cleft Palate, Proliferative Retinopathy, and Developmental Delay (ortholog); Developmental Disabilities (ortholog); intellectual disability (ortholog); FOUND IN cell surface (inferred); membrane (inferred); nucleoplasm (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

leucine-rich repeat-containing protein 32; transforming growth factor beta activator LRRC32

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly

Position:

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	9	77,579,273 - 77,592,573 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	11	78,624,450 - 78,637,749 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	11	71,708,222 - 71,721,426 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	11	75,354,997 - 75,368,187 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	11	75,354,997 - 75,367,440 (-)	Ensembl	panpan1.1		panPan2

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Cleft Palate, Proliferative Retinopathy, and Developmental Delay (ISO)

Developmental Disabilities (ISO)

intellectual disability (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

establishment of protein localization to extracellular region (IEA)

negative regulation of activated T cell proliferation (IEA,ISO)

negative regulation of cytokine production (IEA,ISO)

positive regulation of gene expression (IEA,ISO)

secondary palate development (IEA)

transforming growth factor beta receptor signaling pathway (IEA)

Cellular Component

cell surface (IEA)

membrane (IEA)

nucleoplasm (IEA)

Molecular Function

protein binding (ISO)

receptor ligand inhibitor activity (IEA)

transforming growth factor beta binding (IEA)

References

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

LRRC32
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	9	77,579,273 - 77,592,573 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	11	78,624,450 - 78,637,749 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	11	71,708,222 - 71,721,426 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	11	75,354,997 - 75,368,187 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	11	75,354,997 - 75,367,440 (-)	Ensembl	panpan1.1		panPan2

LRRC32
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	11	76,657,524 - 76,670,747 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	11	76,657,524 - 76,670,747 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	11	76,368,568 - 76,381,791 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	11	76,046,222 - 76,058,543 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	11	76,046,222 - 76,058,543	NCBI
Celera	11	73,676,360 - 73,689,583 (-)	NCBI		Celera
Cytogenetic Map	11	q13.5	NCBI
HuRef	11	72,666,014 - 72,679,237 (-)	NCBI		HuRef
CHM1_1	11	76,252,093 - 76,265,313 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	11	76,588,003 - 76,601,225 (-)	NCBI		T2T-CHM13v2.0

Lrrc32
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	7	98,138,515 - 98,151,038 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	7	98,138,490 - 98,151,388 (+)	Ensembl		GRCm39 Ensembl
GRCm38	7	98,489,305 - 98,501,831 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	7	98,489,283 - 98,502,181 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	7	105,642,732 - 105,650,341 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	7	98,369,414 - 98,375,198 (+)	NCBI		MGSCv36	mm8
MGSCv36	7	88,242,266 - 88,245,111 (+)	NCBI		MGSCv36	mm8
Celera	7	98,817,398 - 98,825,017 (+)	NCBI		Celera
Cytogenetic Map	7	E1	NCBI
cM Map	7	53.86	NCBI

Lrrc32
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	162,196,995 - 162,209,563 (+)	NCBI		GRCr8
mRatBN7.2	1	152,785,709 - 152,802,997 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	152,786,511 - 152,798,373 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	160,775,758 - 160,787,610 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	167,955,926 - 167,967,778 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	160,829,451 - 160,841,303 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	163,443,972 - 163,457,426 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	163,445,527 - 163,457,424 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	169,648,351 - 169,661,088 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	155,760,527 - 155,771,294 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	1	155,838,894 - 155,849,700 (+)	NCBI
Celera	1	150,875,833 - 150,887,643 (+)	NCBI		Celera
Cytogenetic Map	1	q32	NCBI

Lrrc32
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955414	15,296,563 - 15,309,088 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955414	15,296,704 - 15,309,088 (+)	NCBI	ChiLan1.0	ChiLan1.0

LRRC32
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	21	22,051,140 - 22,059,714 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	21	22,051,920 - 22,057,632 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	21	21,875,962 - 21,895,388 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	21	22,249,186 - 22,268,633 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	21	22,249,292 - 22,261,763 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	21	22,024,459 - 22,043,872 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	21	22,243,899 - 22,263,312 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	21	22,163,062 - 22,182,511 (+)	NCBI		UU_Cfam_GSD_1.0

Lrrc32
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	63,706,129 - 63,716,750 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936498	5,305,545 - 5,315,539 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936498	5,305,680 - 5,315,580 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

LRRC32
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	9	10,802,236 - 10,815,563 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	9	10,802,228 - 10,815,892 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	9	11,913,105 - 11,926,575 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

LRRC32
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	1	67,866,072 - 67,879,177 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	1	67,864,609 - 67,879,160 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666043	57,909,760 - 57,923,072 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Lrrc32
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624817	497,372 - 510,580 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624817	497,415 - 510,061 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_003808154	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008960255	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_014346939	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034933412	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034933413	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034933415	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034933416	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JARIFH020000009	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSPPAT00000032838 ⟹ ENSPPAP00000010190

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	11	75,354,997 - 75,367,440 (-)	Ensembl

RefSeq Acc Id:

XM_003808154 ⟹ XP_003808202

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	9	77,579,273 - 77,592,573 (-)	NCBI
NHGRI_mPanPan1	11	78,625,958 - 78,637,726 (-)	NCBI
Mhudiblu_PPA_v0	11	71,708,222 - 71,721,423 (-)	NCBI
PanPan1.1	11	75,354,997 - 75,368,187 (-)	NCBI

Sequence:

show sequence

GGTGGGGCAGCTGAGCGGCCTGCTCCTCCTCGGGCCGTGACCCCGGGGTCTGGCGCGGGGTGGG
ACCCGGGGGCGGGTTTGCGCAAAATGTGCCGAGACTGCCCGGGAGAGGAGCTGCGGCCGCGCTG
AGCCAGAGCCATGAGATCCCAGATCCTGCTGCTCCTGGCCCTGCTGACCCTAGGCCTGGCTGCA
CAACACCAAGACAAAGTGCCCTGTAAGATGGTGGACAAGAAGGTCTCGTGCCAGGGTCTGGGCC
TGCTCCAGGTCCCCTCGGTGCTCCCGCCAGACACTGAGACCCTTGATCTATCTGGGAACCAGCT
GCGGAGTATCCTGGCCTCACCCCTGGGCTTCTACACGGCACTTCGTCACCTGGACCTGAGCACC
AATGAGATCAGCTTCCTCCAGCCAGGAGCCTTCCAGGCCCTGACCCACCTGGAGCACCTCAGCC
TGGCTCACAACCGGCTGGCGATGGCCACTGCGCTGAGTGCTGGTGGCCTGGGCCCCCTGCCACA
CGTGACCTCCCTGGACCTGTCTGGGAACAGCCTGTACAGCGGCCTGCTGGAGCGGCTGCTGGGG
GAGGCACCCAGCCTGCATACCCTCTCACTGGCGGAGAACAGTCTGACTCGCCTCACCCGCCACA
CCTTCCGGGACATGCCTGCGCTGGAGCAGCTTGACCTGCATAGCAACGTGCTGATGGACATCGA
GGATGGCGCCTTCGAGGGCCTGCCCCGCCTGACCCATCTCAACCTCTCCAGGAATTCCCTCACC
TGCATCTCCGACTTCAGCCTCCAGCAGCTGCGGGTGCTAGACCTGAGCTGCAACAGCATCGAGG
CCTTTCAGACGGCCTCCCAGCCCCAGGCTGAGTTCCAGCTCACCTGGCTTGACCTGCGGGAGAA
CAAACTGCTTCATTTCCCCGACCTGGCCGCGCTCCCGAGACTCATCTACCTGAACTTGTCCAAC
AACCTCATCCGGCTCCCCACAGGGCCACCCCAGGACAGCAAGGGCATCCACGCACCTTCCGAGG
GCTGGTCAGCCCTGCCCCTCTCAGCCCCCAGCGGGAATGCCAGCGCCCGCCCCCTTTCCCAGCT
CTTGAATCTGGATTTGAGCTACAATGAGATTGAGCTTATCCCCGACAGCTTTCTTGAGCACCTG
ACCTCCCTGTGCTTCCTGAACCTCAGCAGAAACTGCTTGCGGACCTTTGAGGCCCGGCGCTCAG
GCTCCCTGCCCTGCCTGATGCTCCTCGACTTAAGCCACAATGCCCTGGAGACACTGGAACTGGG
CGCCAGAGCCCTGGGGTCTCTGCGGACGCTGCTCCTACAGGGCAATGCCCTGCGGGACCTGCCC
CCATACACCTTTGCCAATCTGGCCAGCCTGCAGCGGCTCAACCTGCAGGGGAACCGAGTCAGCC
CCTGTGGGGGGCCAGATGAGCCTGGCCCCTCCGGCTGTGTGGCCTTCTCTGGCATCACCTCCCT
CCGCAGCCTGAGCCTGGTGGATAATGAGATAGAGCTGCTCAGGGCAGGGGCCTTCCTCCACACC
CCACTGACTGAGCTGGACCTTTCTTCCAATCCTGGGCTGGAGGTGGCCACGGGGGCCTTGGGAG
GCCTGGAGTCCTCCTTGGAGGTCCTGGCACTGCAGGGCAATGGGCTGATGGTCCTGCAGGTGGA
CCTGCCCTGCTTCATCTGCCTCAAGCGGCTCAATCTTGCCGAGAACCGCCTGAGCCACCTTCCC
GCCTGGACACAGGCTGTGTCACTGGAGGTGCTGGACCTGCGAAACAACAGCTTCAGCCTCCTGC
CAGGCAGTGCCATGGGTGGCCTGGAGACCAGCCTGCGGCGCCTCTACCTGCAGGGGAATCCACT
CAGCTGCTGCGGCAATGGCTGGCTGGCAGCCCAGCTGCACCAGGGCCGTGTGGACGTGGACGCC
ACCCAGGACCTGATCTGCCGCTTCAGCTCCCAGGAGGAGGTGTCCCTGAGCCACGTGCGTCCCG
AGGACTGTGAGAAGGGGGGGCTCAAGAACATCAACCTCATCATCATCCTCACCTTCATACTGGT
CTCTGCCATCCTCCTCACCACGCTGGCCACCTGCTGCTGCGTCCGCCGGCAGAAGTTTAACCAA
CAGTATAAAGCCTAAAGAAGCCGGGAGACACTCTAGGTCAGTGGGGGAGCCTGAGGTACAGAGA
AGAGTGAGGACTGACTCAAGGTCACACAGTGATCCGGGATCCCAGAACTCTGGTCTCCAAATTA
CAGCCCAGGACACCTTTCTCTGCCGCCTGCTGCATCAGTGGGTGACCCCCTTCCCGGGCTGCAC
TTTGGGTCCAGCTGTGGAAGCCAGAAATTGGGCGGTTTCAGGGACAGCAGAGAATAATGTTGAC
CTGTCAGATCAACAAATCTTCACTGAGCATGTATTTTGTGCCACACCCTGCTCTGGGCACTGGG
AATGCTGGGAAATGAGATACATTCCCGCCCTCAAGAATCTCCCAGTCTGGTAGGAGAGAGTGCT
GCAGAGCCACGTGGCCGCCACGCAGTGTGCTTAGGGCCTGAGGTGTGAAAGCCCAGGGCTCCAG
AGCTCGGCAGGCCCCGCTGGTTTGGTGCAGTGAGTCCTGCCCTGGCTGTGCCAGGGTGAGGGAG
GGCCAAGCCCAGGAGGATTTGTCTGAGACATTTCCAAGCAGACTGTTTGTCACGTCTTCTGATA
ATGACTTTCAGTCTCTCTGAAAATGAAAAGCTTATGACCGGAAGAGAGAATTGGAGCTGTACGA
GTGTGTCTTGGATCTGGTGTTGTTAGGTGGGCCACGGCGGCTCCAGCAGAGTCTGCTTAAGGGG
TCCAGCCCAGCACTGGACCATTCCGTCTCCTGCTCTGGACAGGCCCTCTCCCTTCCTGGCACTC
TCATGTTGCATACCCTGACCCCAGTACTGCTCTAAGCACCGTCCCTGCCCAGCCCCACTTCTCC
ATCGCAGCCCCACCTTGGCTGCTGAGCCAGGAGCTAAAACCTTAGATATCTGGTTCTGTTTTGC
ACCCAGCTTGGCAGATGTGGATTATGAATCCAAGCCTTGTGTCTGCCCCTATATGACAGCCCTA
TATTTTATCCCCGTTTTATAAAAGAGGAAACTGAAGTTCTGAAAATCTCCTTCCAGGGCCCCAG
CTAACTAATGCCGTAGGTGAGATTCAAACCTTCATCCTTCTGTCTCCAGGGCCTGATCTTTACC
ACTGCAGGGGCTGCAGGCTGTTAAGTGGACAGGAAGTGGCCCCACATAGCCCGAGCAGGGTCTG
GAAGCATCCTGTGCTGTGCACACCTGCTCTCTCCTCTCTCCCAGGCAGGCAGCTGCAGGCGCTC
TCCTCCTTCTCTGCCTTAGTTTCCCTCCTCCCCTCCTTTCCACCCTGGTGTGGGTTCTCCTGTT
CTCTCTGTGCTCTTGCATTCTCTCATTCCCTTTTCCTCTATTGAGCAGAGCCTGGAGTTTGAGA
CTATGGAATCCAACCTCCCCATTGCACAGATGGGGAAACTGAGGCTTAGGAAGAGAATGAAACT
TGTGGAGAGCTTATACAGAGCCTCTGGGGGAAAAAAGAGCCCTTATTTGTGGGGTGAGATTGGG
GGTTGGACCAGAGTGATGTCCTCTCTCAGCTATCACATCACAAGATAATGCTGGCTCCAAACTT
CCTTTCTGTGCCTCATCATGCAAGGATCTTTTTTCCCTCTTACAAAAACAGGTAAAAAGCCTCG
CCCAGATGACCCCCGTCCCTCATACCATGGAGTCATGAGCTGTCTGGGAAGAATGGACGTGCTG
GGACTAACTCAAGACCTTGTTTTGCTGTCTTCATCATCTTACCTGTGCTTGGCCCACAGTCTGG
CTCATGATGTGGGCTCAGTAATGTGCGAGAAAGTGAAAATGCCACTCTCTCCACCCCATTTTAC
AGAGGAGAACACCAAGGCCCAGAGGAAGTTAAGGGAGAGTCAATGGGCAGAGCCAGGGCTAGGC
CCTGGTGGTGTGTGGAGCACCCAGGCAGACCCAGTCCTGGTTGGGATCACAACCACGGGTGCTA
CTTCACATAACACTCTTCCTTAGGCCTGGAGGCCAAGGTGTGGGTCCCCACGCCTGATCTTTGA
AAACACTACACAATGCTGCTGTCACTTCCCAGGACCCAGGCCGCAGCCCAGGCCTCGGGACCAA
CTCTTTGTATAACCTACCTGAATGTATTAAAAACTAATTTTGGAGAAGCA

hide sequence

RefSeq Acc Id:

XM_014346939 ⟹ XP_014202425

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	9	77,579,273 - 77,592,137 (-)	NCBI
NHGRI_mPanPan1	11	78,625,958 - 78,637,015 (-)	NCBI
Mhudiblu_PPA_v0	11	71,708,222 - 71,720,892 (-)	NCBI
PanPan1.1	11	75,354,997 - 75,367,561 (-)	NCBI

Sequence:

show sequence

GAGCTGCCTGAAATTCCGCCATCACAGCCACATTCCTTTGGGTTAAGGTCTAATTCCCCCGTGG
GATGCACATGTCTCCAGAACGAGGCTTGCCCTTAGTGATTCACTGCTTGACAGGAACGTCCGCA
GCAGCTCTCCCAGGACCCCACTCTGCCAGTAAGTCAGCTGAGGCCGAGAGGAGGGAGAGAGGAC
CTCAGAGCCCAGACTGTGAGCTAGTCTGCCCTGCTCCTGCGTGTGAGGGGTCGTTGGCAGGGCT
TAGGGAAGGAGACCTTGATTTGGTATAGTGGGAACATTTGCTTTGGAGACAGATGAACTGGATT
GTGATCCTGACCCTGCTATTTTCTCCTTGTGTGACTTTGGAGCCATGAGATCCCAGATCCTGCT
GCTCCTGGCCCTGCTGACCCTAGGCCTGGCTGCACAACACCAAGACAAAGTGCCCTGTAAGATG
GTGGACAAGAAGGTCTCGTGCCAGGGTCTGGGCCTGCTCCAGGTCCCCTCGGTGCTCCCGCCAG
ACACTGAGACCCTTGATCTATCTGGGAACCAGCTGCGGAGTATCCTGGCCTCACCCCTGGGCTT
CTACACGGCACTTCGTCACCTGGACCTGAGCACCAATGAGATCAGCTTCCTCCAGCCAGGAGCC
TTCCAGGCCCTGACCCACCTGGAGCACCTCAGCCTGGCTCACAACCGGCTGGCGATGGCCACTG
CGCTGAGTGCTGGTGGCCTGGGCCCCCTGCCACACGTGACCTCCCTGGACCTGTCTGGGAACAG
CCTGTACAGCGGCCTGCTGGAGCGGCTGCTGGGGGAGGCACCCAGCCTGCATACCCTCTCACTG
GCGGAGAACAGTCTGACTCGCCTCACCCGCCACACCTTCCGGGACATGCCTGCGCTGGAGCAGC
TTGACCTGCATAGCAACGTGCTGATGGACATCGAGGATGGCGCCTTCGAGGGCCTGCCCCGCCT
GACCCATCTCAACCTCTCCAGGAATTCCCTCACCTGCATCTCCGACTTCAGCCTCCAGCAGCTG
CGGGTGCTAGACCTGAGCTGCAACAGCATCGAGGCCTTTCAGACGGCCTCCCAGCCCCAGGCTG
AGTTCCAGCTCACCTGGCTTGACCTGCGGGAGAACAAACTGCTTCATTTCCCCGACCTGGCCGC
GCTCCCGAGACTCATCTACCTGAACTTGTCCAACAACCTCATCCGGCTCCCCACAGGGCCACCC
CAGGACAGCAAGGGCATCCACGCACCTTCCGAGGGCTGGTCAGCCCTGCCCCTCTCAGCCCCCA
GCGGGAATGCCAGCGCCCGCCCCCTTTCCCAGCTCTTGAATCTGGATTTGAGCTACAATGAGAT
TGAGCTTATCCCCGACAGCTTTCTTGAGCACCTGACCTCCCTGTGCTTCCTGAACCTCAGCAGA
AACTGCTTGCGGACCTTTGAGGCCCGGCGCTCAGGCTCCCTGCCCTGCCTGATGCTCCTCGACT
TAAGCCACAATGCCCTGGAGACACTGGAACTGGGCGCCAGAGCCCTGGGGTCTCTGCGGACGCT
GCTCCTACAGGGCAATGCCCTGCGGGACCTGCCCCCATACACCTTTGCCAATCTGGCCAGCCTG
CAGCGGCTCAACCTGCAGGGGAACCGAGTCAGCCCCTGTGGGGGGCCAGATGAGCCTGGCCCCT
CCGGCTGTGTGGCCTTCTCTGGCATCACCTCCCTCCGCAGCCTGAGCCTGGTGGATAATGAGAT
AGAGCTGCTCAGGGCAGGGGCCTTCCTCCACACCCCACTGACTGAGCTGGACCTTTCTTCCAAT
CCTGGGCTGGAGGTGGCCACGGGGGCCTTGGGAGGCCTGGAGTCCTCCTTGGAGGTCCTGGCAC
TGCAGGGCAATGGGCTGATGGTCCTGCAGGTGGACCTGCCCTGCTTCATCTGCCTCAAGCGGCT
CAATCTTGCCGAGAACCGCCTGAGCCACCTTCCCGCCTGGACACAGGCTGTGTCACTGGAGGTG
CTGGACCTGCGAAACAACAGCTTCAGCCTCCTGCCAGGCAGTGCCATGGGTGGCCTGGAGACCA
GCCTGCGGCGCCTCTACCTGCAGGGGAATCCACTCAGCTGCTGCGGCAATGGCTGGCTGGCAGC
CCAGCTGCACCAGGGCCGTGTGGACGTGGACGCCACCCAGGACCTGATCTGCCGCTTCAGCTCC
CAGGAGGAGGTGTCCCTGAGCCACGTGCGTCCCGAGGACTGTGAGAAGGGGGGGCTCAAGAACA
TCAACCTCATCATCATCCTCACCTTCATACTGGTCTCTGCCATCCTCCTCACCACGCTGGCCAC
CTGCTGCTGCGTCCGCCGGCAGAAGTTTAACCAACAGTATAAAGCCTAAAGAAGCCGGGAGACA
CTCTAGGTCAGTGGGGGAGCCTGAGGTACAGAGAAGAGTGAGGACTGACTCAAGGTCACACAGT
GATCCGGGATCCCAGAACTCTGGTCTCCAAATTACAGCCCAGGACACCTTTCTCTGCCGCCTGC
TGCATCAGTGGGTGACCCCCTTCCCGGGCTGCACTTTGGGTCCAGCTGTGGAAGCCAGAAATTG
GGCGGTTTCAGGGACAGCAGAGAATAATGTTGACCTGTCAGATCAACAAATCTTCACTGAGCAT
GTATTTTGTGCCACACCCTGCTCTGGGCACTGGGAATGCTGGGAAATGAGATACATTCCCGCCC
TCAAGAATCTCCCAGTCTGGTAGGAGAGAGTGCTGCAGAGCCACGTGGCCGCCACGCAGTGTGC
TTAGGGCCTGAGGTGTGAAAGCCCAGGGCTCCAGAGCTCGGCAGGCCCCGCTGGTTTGGTGCAG
TGAGTCCTGCCCTGGCTGTGCCAGGGTGAGGGAGGGCCAAGCCCAGGAGGATTTGTCTGAGACA
TTTCCAAGCAGACTGTTTGTCACGTCTTCTGATAATGACTTTCAGTCTCTCTGAAAATGAAAAG
CTTATGACCGGAAGAGAGAATTGGAGCTGTACGAGTGTGTCTTGGATCTGGTGTTGTTAGGTGG
GCCACGGCGGCTCCAGCAGAGTCTGCTTAAGGGGTCCAGCCCAGCACTGGACCATTCCGTCTCC
TGCTCTGGACAGGCCCTCTCCCTTCCTGGCACTCTCATGTTGCATACCCTGACCCCAGTACTGC
TCTAAGCACCGTCCCTGCCCAGCCCCACTTCTCCATCGCAGCCCCACCTTGGCTGCTGAGCCAG
GAGCTAAAACCTTAGATATCTGGTTCTGTTTTGCACCCAGCTTGGCAGATGTGGATTATGAATC
CAAGCCTTGTGTCTGCCCCTATATGACAGCCCTATATTTTATCCCCGTTTTATAAAAGAGGAAA
CTGAAGTTCTGAAAATCTCCTTCCAGGGCCCCAGCTAACTAATGCCGTAGGTGAGATTCAAACC
TTCATCCTTCTGTCTCCAGGGCCTGATCTTTACCACTGCAGGGGCTGCAGGCTGTTAAGTGGAC
AGGAAGTGGCCCCACATAGCCCGAGCAGGGTCTGGAAGCATCCTGTGCTGTGCACACCTGCTCT
CTCCTCTCTCCCAGGCAGGCAGCTGCAGGCGCTCTCCTCCTTCTCTGCCTTAGTTTCCCTCCTC
CCCTCCTTTCCACCCTGGTGTGGGTTCTCCTGTTCTCTCTGTGCTCTTGCATTCTCTCATTCCC
TTTTCCTCTATTGAGCAGAGCCTGGAGTTTGAGACTATGGAATCCAACCTCCCCATTGCACAGA
TGGGGAAACTGAGGCTTAGGAAGAGAATGAAACTTGTGGAGAGCTTATACAGAGCCTCTGGGGG
AAAAAAGAGCCCTTATTTGTGGGGTGAGATTGGGGGTTGGACCAGAGTGATGTCCTCTCTCAGC
TATCACATCACAAGATAATGCTGGCTCCAAACTTCCTTTCTGTGCCTCATCATGCAAGGATCTT
TTTTCCCTCTTACAAAAACAGGTAAAAAGCCTCGCCCAGATGACCCCCGTCCCTCATACCATGG
AGTCATGAGCTGTCTGGGAAGAATGGACGTGCTGGGACTAACTCAAGACCTTGTTTTGCTGTCT
TCATCATCTTACCTGTGCTTGGCCCACAGTCTGGCTCATGATGTGGGCTCAGTAATGTGCGAGA
AAGTGAAAATGCCACTCTCTCCACCCCATTTTACAGAGGAGAACACCAAGGCCCAGAGGAAGTT
AAGGGAGAGTCAATGGGCAGAGCCAGGGCTAGGCCCTGGTGGTGTGTGGAGCACCCAGGCAGAC
CCAGTCCTGGTTGGGATCACAACCACGGGTGCTACTTCACATAACACTCTTCCTTAGGCCTGGA
GGCCAAGGTGTGGGTCCCCACGCCTGATCTTTGAAAACACTACACAATGCTGCTGTCACTTCCC
AGGACCCAGGCCGCAGCCCAGGCCTCGGGACCAACTCTTTGTATAACCTACCTGAATGTATTAA
AAACTAATTTTGGAGAAGCA

hide sequence

RefSeq Acc Id:

XM_034933416 ⟹ XP_034789307

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	9	77,579,273 - 77,592,502 (-)	NCBI
NHGRI_mPanPan1	11	78,624,450 - 78,637,749 (-)	NCBI
Mhudiblu_PPA_v0	11	71,708,222 - 71,721,426 (-)	NCBI

Protein Sequences


Protein RefSeqs	XP_003808202	(Get FASTA)	NCBI Sequence Viewer
	XP_014202425	(Get FASTA)	NCBI Sequence Viewer
	XP_034789307	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSPPAP00000010190.1

RefSeq Acc Id:	XP_003808202 ⟸ XM_003808154
- Peptide Label:	isoform X1
- UniProtKB:	A0A2R9A4I4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MRSQILLLLALLTLGLAAQHQDKVPCKMVDKKVSCQGLGLLQVPSVLPPDTETLDLSGNQLRSI LASPLGFYTALRHLDLSTNEISFLQPGAFQALTHLEHLSLAHNRLAMATALSAGGLGPLPHVTS LDLSGNSLYSGLLERLLGEAPSLHTLSLAENSLTRLTRHTFRDMPALEQLDLHSNVLMDIEDGA FEGLPRLTHLNLSRNSLTCISDFSLQQLRVLDLSCNSIEAFQTASQPQAEFQLTWLDLRENKLL HFPDLAALPRLIYLNLSNNLIRLPTGPPQDSKGIHAPSEGWSALPLSAPSGNASARPLSQLLNL DLSYNEIELIPDSFLEHLTSLCFLNLSRNCLRTFEARRSGSLPCLMLLDLSHNALETLELGARA LGSLRTLLLQGNALRDLPPYTFANLASLQRLNLQGNRVSPCGGPDEPGPSGCVAFSGITSLRSL SLVDNEIELLRAGAFLHTPLTELDLSSNPGLEVATGALGGLESSLEVLALQGNGLMVLQVDLPC FICLKRLNLAENRLSHLPAWTQAVSLEVLDLRNNSFSLLPGSAMGGLETSLRRLYLQGNPLSCC GNGWLAAQLHQGRVDVDATQDLICRFSSQEEVSLSHVRPEDCEKGGLKNINLIIILTFILVSAI LLTTLATCCCVRRQKFNQQYKA hide sequence

RefSeq Acc Id:	XP_014202425 ⟸ XM_014346939
- Peptide Label:	isoform X1
- UniProtKB:	A0A2R9A4I4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MRSQILLLLALLTLGLAAQHQDKVPCKMVDKKVSCQGLGLLQVPSVLPPDTETLDLSGNQLRSI LASPLGFYTALRHLDLSTNEISFLQPGAFQALTHLEHLSLAHNRLAMATALSAGGLGPLPHVTS LDLSGNSLYSGLLERLLGEAPSLHTLSLAENSLTRLTRHTFRDMPALEQLDLHSNVLMDIEDGA FEGLPRLTHLNLSRNSLTCISDFSLQQLRVLDLSCNSIEAFQTASQPQAEFQLTWLDLRENKLL HFPDLAALPRLIYLNLSNNLIRLPTGPPQDSKGIHAPSEGWSALPLSAPSGNASARPLSQLLNL DLSYNEIELIPDSFLEHLTSLCFLNLSRNCLRTFEARRSGSLPCLMLLDLSHNALETLELGARA LGSLRTLLLQGNALRDLPPYTFANLASLQRLNLQGNRVSPCGGPDEPGPSGCVAFSGITSLRSL SLVDNEIELLRAGAFLHTPLTELDLSSNPGLEVATGALGGLESSLEVLALQGNGLMVLQVDLPC FICLKRLNLAENRLSHLPAWTQAVSLEVLDLRNNSFSLLPGSAMGGLETSLRRLYLQGNPLSCC GNGWLAAQLHQGRVDVDATQDLICRFSSQEEVSLSHVRPEDCEKGGLKNINLIIILTFILVSAI LLTTLATCCCVRRQKFNQQYKA hide sequence

RefSeq Acc Id:	XP_034789307 ⟸ XM_034933416
- Peptide Label:	isoform X2

Ensembl Acc Id:

ENSPPAP00000010190 ⟸ ENSPPAT00000032838

Protein Domains

LRRNT

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSPPAG00000028327	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSPPAT00000032838.1	UniProtKB/TrEMBL
Gene3D-CATH	3.80.10.10	UniProtKB/TrEMBL
InterPro	Dev_Immune_Receptor	UniProtKB/TrEMBL
	Leu-rich_rpt	UniProtKB/TrEMBL
	Leu-rich_rpt_typical-subtyp	UniProtKB/TrEMBL
	LRR_dom_sf	UniProtKB/TrEMBL
	LRRNT	UniProtKB/TrEMBL
KEGG Report	pps:100977955	UniProtKB/TrEMBL
NCBI Gene	LRRC32	ENTREZGENE
PANTHER	SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN	UniProtKB/TrEMBL
	TIR DOMAIN-CONTAINING PROTEIN	UniProtKB/TrEMBL
Pfam	LRR_8	UniProtKB/TrEMBL
	LRRNT	UniProtKB/TrEMBL
PROSITE	LRR	UniProtKB/TrEMBL
SMART	LRR_BAC	UniProtKB/TrEMBL
	LRR_RI	UniProtKB/TrEMBL
	LRR_TYP	UniProtKB/TrEMBL
	LRRNT	UniProtKB/TrEMBL
Superfamily-SCOP	L domain-like	UniProtKB/TrEMBL
	Outer arm dynein light chain 1	UniProtKB/TrEMBL
UniProt	A0A2R9A4I4	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - OMIM

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