Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

ONTOLOGY REPORT - ANNOTATIONS

Term:cytoplasmic side of rough endoplasmic reticulum membrane
go back to main search page
Accession:GO:0098556 term browser browse the term
Definition:The side (leaflet) of the rough endoplasmic reticulum membrane that faces the cytoplasm.

GViewer not supported for the selected species.

show annotations for term's descendants           Sort by:
cytoplasmic side of rough endoplasmic reticulum membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALG5 ALG5 dolichyl-phosphate beta-glucosyltransferase is_active_in ISO (PMID:10359825) UniProt PMID:10359825 NCBI chr 3:15,468,291...15,519,137
Ensembl chr 3:15,468,208...15,518,941 		JBrowse link
G EPM2A EPM2A glucan phosphatase, laforin located_in IEA Ensembl GO_REF:0000107 NCBI chr13:26,152,974...26,266,676
Ensembl chr13:26,153,319...26,264,568 		JBrowse link
G GNRH1 gonadotropin releasing hormone 1 ISO gonadotropin-releasing hormone-associated peptide RGD PMID:2183089 RGD:9685146 NCBI chr 8:23,543,717...23,550,728
Ensembl chr 8:23,542,806...23,547,771 		JBrowse link
G ICMT isoprenylcysteine carboxyl methyltransferase located_in ISO (PMID:24930395) UniProt PMID:24930395 NCBI chr20:125,504,240...125,516,749
Ensembl chr20:125,504,325...125,515,160 		JBrowse link
G LOC103239528 60S ribosomal protein L6 located_in ISO (PMID:24930395) UniProt PMID:24930395 NCBI chr11:107,648,325...107,650,073 JBrowse link
G MGAT2 alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase located_in ISO (PMID:24930395) UniProt PMID:24930395 NCBI chr24:26,660,554...26,663,264
Ensembl chr24:26,661,049...26,662,392 		JBrowse link
G RPL10 ribosomal protein L10 located_in ISO (PMID:24930395) UniProt PMID:24930395
G RPL11 ribosomal protein L11 located_in ISO (PMID:24930395) UniProt PMID:24930395 NCBI chr20:108,982,781...108,987,667
Ensembl chr20:108,981,723...108,987,734 		JBrowse link
G RPL23 ribosomal protein L23 located_in ISO (PMID:24930395) UniProt PMID:24930395 NCBI chr16:67,341,370...67,345,141 JBrowse link
G RPL27 ribosomal protein L27 located_in ISO (PMID:24930395) UniProt PMID:24930395 NCBI chr16:63,287,493...63,292,054
Ensembl chr16:63,287,208...63,292,473 		JBrowse link
G RPL29 ribosomal protein L29 located_in ISO (PMID:24930395) UniProt PMID:24930395 NCBI chr22:13,362,348...13,365,013 JBrowse link
G RPL31 ribosomal protein L31 located_in ISO (PMID:24930395) UniProt PMID:24930395 NCBI chr14:4,710,622...4,714,974 JBrowse link
G RPL32 ribosomal protein L32 located_in ISO (PMID:24930395) UniProt PMID:24930395 NCBI chr22:48,811,342...48,816,905
Ensembl chr22:48,811,401...48,816,882 		JBrowse link
G RPL35 ribosomal protein L35 located_in ISO (PMID:24930395) UniProt PMID:24930395 NCBI chr12:13,276,525...13,290,721 JBrowse link
G RPS15 ribosomal protein S15 located_in ISO (PMID:24930395) UniProt PMID:24930395 NCBI chr 6:1,211,716...1,213,896
Ensembl chr 6:1,211,713...1,214,044 		JBrowse link
G RPS16 ribosomal protein S16 located_in ISO (PMID:24930395) UniProt PMID:24930395 NCBI chr 6:34,039,470...34,042,278
Ensembl chr 6:34,039,251...34,042,313 		JBrowse link
G RPS17 ribosomal protein S17 located_in ISO (PMID:24930395) UniProt PMID:24930395 NCBI chr29:3,109,426...3,113,538 JBrowse link
G RPS18 ribosomal protein S18 located_in ISO (PMID:24930395) UniProt PMID:24930395 NCBI chr17:38,800,532...38,805,005 JBrowse link
G RPS20 ribosomal protein S20 located_in ISO (PMID:24930395) UniProt PMID:24930395 NCBI chr 8:52,108,532...52,109,956
Ensembl chr 8:52,108,568...52,110,016 		JBrowse link
G RPS21 ribosomal protein S21 located_in ISO (PMID:24930395) UniProt PMID:24930395 NCBI chr 2:1,841,865...1,843,332
Ensembl chr 2:1,841,865...1,843,087 		JBrowse link
G RPS23 ribosomal protein S23 located_in ISO (PMID:24930395) UniProt PMID:24930395 NCBI chr 4:76,394,049...76,396,435
Ensembl chr 4:76,392,625...76,396,331 		JBrowse link
G RPS26 ribosomal protein S26 located_in ISO (PMID:24930395) UniProt PMID:24930395 NCBI chr11:51,987,294...51,987,785 JBrowse link
G RPS28 ribosomal protein S28 located_in ISO (PMID:24930395) UniProt PMID:24930395 NCBI chr 6:7,684,720...7,685,597 JBrowse link
G RPS29 ribosomal protein S29 located_in ISO (PMID:24930395) UniProt PMID:24930395 NCBI chr24:26,621,394...26,631,509
Ensembl chr24:26,628,561...26,632,048 		JBrowse link
G RPS3 ribosomal protein S3 located_in ISO (PMID:24930395) UniProt PMID:24930395 NCBI chr 1:66,629,895...66,636,462
Ensembl chr 1:66,629,954...66,635,344 		JBrowse link
G RPSA ribosomal protein SA located_in ISO (PMID:24930395) UniProt PMID:24930395 NCBI chr15:23,915...29,889 JBrowse link
G UBA52 ubiquitin A-52 residue ribosomal protein fusion product 1 located_in ISO (PMID:24930395) UniProt PMID:24930395 NCBI chr 6:17,040,127...17,043,569
Ensembl chr 6:17,040,064...17,045,737 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 17755
    cellular anatomical entity 17660
      side of membrane 686
        cytoplasmic side of membrane 225
          cytoplasmic side of endoplasmic reticulum membrane 40
            cytoplasmic side of rough endoplasmic reticulum membrane 27
Path 2
Term Annotations click to browse term
  cellular_component 17755
    cellular anatomical entity 17660
      intracellular anatomical structure 14132
        intracellular organelle 12541
          intracellular membrane-bounded organelle 11220
            endoplasmic reticulum 1648
              endoplasmic reticulum subcompartment 828
                endoplasmic reticulum membrane 815
                  rough endoplasmic reticulum membrane 46
                    cytoplasmic side of rough endoplasmic reticulum membrane 27
paths to the root