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U4/U6 snRNP - Ontology Report - Rat Genome Database

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ONTOLOGY REPORT - ANNOTATIONS

Term:U4/U6 snRNP
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Accession:GO:0071001 term browser browse the term
Definition:A ribonucleoprotein complex that contains the extensively base paired small nuclear RNAs U4 and U6, a heptameric ring of Sm proteins associated with U4, the Lsm2-8 heptameric ring complex associated with U6, as well as several proteins that are unique to the U4 snRNP or U6 snRNPs, some of which remain associated with the U4/U6 snRNA both while the U4 snRNP is free or assembled into a series of spliceosomal complexes.

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U4/U6 snRNP term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ppih peptidylprolyl isomerase H part_of ISO
IEA 		(PMID:9570313)
GO_REF:0000107 		RGD
Ensembl		 PMID:9570313 GO_REF:0000107 NCBI chr 5:138,191,624...138,209,625
Ensembl chr 5:132,906,328...132,924,267 		JBrowse link
G Prpf4 pre-mRNA splicing tri-snRNP complex factor PRPF4 part_of ISO
IEA 		(PMID:25383878), (PMID:9570313)
GO_REF:0000107 		RGD
Ensembl		 PMID:9570313 PMID:25383878 GO_REF:0000107 NCBI chr 5:75,859,934...75,873,924
Ensembl chr 5:75,859,924...75,873,919 		JBrowse link
G Sart3 spliceosome associated factor 3, U4/U6 recycling protein located_in ISO
IEA 		(PMID:12032085)
GO_REF:0000107 		RGD
Ensembl		 PMID:12032085 GO_REF:0000107 NCBI chr12:42,859,026...42,887,041
Ensembl chr12:42,859,305...42,887,038 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 21349
    protein-containing complex 6834
      nuclear protein-containing complex 1347
        small nuclear ribonucleoprotein complex 90
          spliceosomal snRNP complex 82
            U4/U6 snRNP 3
Path 2
Term Annotations click to browse term
  cellular_component 21349
    cellular anatomical structure 21053
      intracellular anatomical structure 15531
        intracellular organelle 13784
          intracellular membrane-bounded organelle 12184
            nucleus 7685
              nuclear protein-containing complex 1347
                small nuclear ribonucleoprotein complex 90
                  spliceosomal snRNP complex 82
                    U4/U6 snRNP 3
paths to the root