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ONTOLOGY REPORT - ANNOTATIONS

Term:intestinal epithelial cell differentiation
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Accession:GO:0060575 term browser browse the term
Definition:The process in which a relatively unspecialized cell acquires specialized features of a columnar/cuboidal epithelial cell of the intestine.

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intestinal epithelial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CBFA2T2 CBFA2/RUNX1 partner transcriptional co-repressor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:37,781,107...37,938,150
Ensembl chr 2:37,781,273...37,937,253 		JBrowse link
G CDX2 caudal type homeobox 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:7,080,142...7,088,010
Ensembl chr 3:7,078,503...7,087,285 		JBrowse link
G GATA4 GATA binding protein 4 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:9566909) MGI
Ensembl		 PMID:9566909 GO_REF:0000107 NCBI chr 8:7,348,145...7,432,574
Ensembl chr 8:7,349,660...7,400,562 		JBrowse link
G GATA5 GATA binding protein 5 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:9566909) MGI
Ensembl		 PMID:9566909 GO_REF:0000107 NCBI chr 2:1,756,911...1,769,452
Ensembl chr 2:1,757,420...1,768,143 		JBrowse link
G GATA6 GATA binding protein 6 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:9566909) MGI
Ensembl		 PMID:9566909 GO_REF:0000107 NCBI chr18:58,312,328...58,345,472
Ensembl chr18:58,311,482...58,343,746 		JBrowse link
G PTK6 protein tyrosine kinase 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:667,440...676,380
Ensembl chr 2:667,510...676,109 		JBrowse link
G SAV1 salvador family WW domain containing protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18369314) Ensembl
MGI		 PMID:18369314 GO_REF:0000107 NCBI chr24:27,710,256...27,747,638
Ensembl chr24:27,711,970...27,747,647 		JBrowse link
G SOX9 SRY-box transcription factor 9 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:17681175) Ensembl
MGI		 PMID:17681175 GO_REF:0000107 NCBI chr16:49,519,749...49,523,967
Ensembl chr16:49,518,185...49,523,898 		JBrowse link
G YAP1 Yes1 associated transcriptional regulator acts_upstream_of
involved_in		 ISO
IEA		 (PMID:17980593) MGI
Ensembl		 PMID:17980593 GO_REF:0000107 NCBI chr 1:93,479,478...93,605,340
Ensembl chr 1:93,479,135...93,606,808 		JBrowse link
enterocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G YAP1 Yes1 associated transcriptional regulator acts_upstream_of
involved_in		 ISO
IEA		 (PMID:17980593) MGI
Ensembl		 PMID:17980593 GO_REF:0000107 NCBI chr 1:93,479,478...93,605,340
Ensembl chr 1:93,479,135...93,606,808 		JBrowse link
intestinal epithelial cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C1GALT1 core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 acts_upstream_of_or_within ISO (PMID:21383503) MGI PMID:21383503 NCBI chr21:50,965,519...51,047,863 JBrowse link
G DICER1 dicer 1, ribonuclease III acts_upstream_of_or_within ISO (PMID:21307095) MGI PMID:21307095 NCBI chr24:72,915,550...72,986,658
Ensembl chr24:72,915,499...72,963,006 		JBrowse link
G GSDMC gasdermin C involved_in ISO (PMID:17350798) UniProt PMID:17350798 NCBI chr 8:124,247,934...124,291,282 JBrowse link
G IL6ST interleukin 6 cytokine family signal transducer involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:52,174,893...52,232,475
Ensembl chr 4:52,174,312...52,214,584 		JBrowse link
G KLF5 KLF transcription factor 5 acts_upstream_of_or_within ISO (PMID:23266329) MGI PMID:23266329 NCBI chr 3:52,188,139...52,210,882 JBrowse link
G LOC103233229 cadherin-1 acts_upstream_of_or_within ISO (PMID:22766025) MGI PMID:22766025 NCBI chr 5:58,578,244...58,679,677
Ensembl chr 5:58,578,146...58,679,541 		JBrowse link
G NKX3-2 NK3 homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21307095) Ensembl
MGI		 PMID:21307095 GO_REF:0000107 NCBI chr27:36,641,837...36,647,917
Ensembl chr27:36,641,932...36,644,353 		JBrowse link
G PRDM1 PR/SET domain 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21670299) Ensembl
MGI		 PMID:21670299 GO_REF:0000107 NCBI chr13:67,695,436...67,719,487
Ensembl chr13:67,695,309...67,718,931 		JBrowse link
G SPDEF SAM pointed domain containing ETS transcription factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19549527) Ensembl
MGI		 PMID:19549527 GO_REF:0000107 NCBI chr17:37,555,797...37,562,522
Ensembl chr17:37,555,820...37,562,036 		JBrowse link
G SRC SRC proto-oncogene, non-receptor tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:26,344,480...26,367,448
Ensembl chr 2:26,343,450...26,367,776 		JBrowse link
G TIGAR TP53 induced glycolysis regulatory phosphatase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23726973) Ensembl
MGI		 PMID:23726973 GO_REF:0000107 NCBI chr11:4,354,911...4,381,762
Ensembl chr11:4,355,053...4,381,273 		JBrowse link
G YAP1 Yes1 associated transcriptional regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:93,479,478...93,605,340
Ensembl chr 1:93,479,135...93,606,808 		JBrowse link
G YIPF6 Yip1 domain family member 6 acts_upstream_of_or_within ISO (PMID:22802641) MGI PMID:22802641 NCBI chr  X:58,345,915...58,381,517
Ensembl chr  X:58,346,203...58,379,743 		JBrowse link
intestinal epithelial cell maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDKN1A cyclin dependent kinase inhibitor 1A ISO RGD PMID:20466941 RGD:8662316 NCBI chr17:35,445,668...35,454,334
Ensembl chr17:35,445,223...35,454,342 		JBrowse link
G FZD5 frizzled class receptor 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15778706) Ensembl
MGI		 PMID:15778706 GO_REF:0000107 NCBI chr10:93,545,792...93,553,092
Ensembl chr10:93,550,189...93,551,946 		JBrowse link
G HIF1A hypoxia inducible factor 1 subunit alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20808783) Ensembl
MGI		 PMID:20808783 GO_REF:0000107 NCBI chr24:38,873,830...38,927,657
Ensembl chr24:38,873,861...38,928,288 		JBrowse link
G HOXA5 homeobox A5 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:10564089) MGI
Ensembl		 PMID:10564089 GO_REF:0000107 NCBI chr21:31,224,017...31,227,819
Ensembl chr21:31,224,977...31,227,994 		JBrowse link
G TMIGD1 transmembrane and immunoglobulin domain containing 1 acts_upstream_of_or_within ISO (PMID:33129760) MGI PMID:33129760 NCBI chr16:24,042,832...24,063,054 JBrowse link
G TYMS thymidylate synthetase ISO RGD PMID:1260861 RGD:2317427 NCBI chr18:60,030,640...60,043,297
Ensembl chr18:60,030,658...60,041,856 		JBrowse link
positive regulation of intestinal epithelial cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC103227720 twinfilin-2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:13,581,102...13,598,830
Ensembl chr22:13,589,034...13,598,752
Ensembl chr22:13,589,034...13,598,752 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17042
    developmental process 6814
      anatomical structure development 6396
        tube development 1258
          digestive tract development 172
            intestinal epithelial cell differentiation 28
              enterocyte differentiation 1
              interstitial cell of Cajal differentiation 0
              intestinal epithelial cell development + 20
Path 2
Term Annotations click to browse term
  biological_process 17042
    developmental process 6814
      anatomical structure development 6396
        tissue development 2247
          epithelium development 1406
            epithelial cell differentiation 816
              columnar/cuboidal epithelial cell differentiation 149
                intestinal epithelial cell differentiation 28
                  enterocyte differentiation 1
                  interstitial cell of Cajal differentiation 0
                  intestinal epithelial cell development + 20
paths to the root