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ONTOLOGY REPORT - ANNOTATIONS

Term:glycerophospholipid catabolic process
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Accession:GO:0046475 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of glycerophospholipids, any derivative of glycerophosphate that contains at least one O-acyl, O-alkyl, or O-alkenyl group attached to the glycerol residue.
Synonyms:exact_synonym: glycerophospholipid breakdown;   glycerophospholipid catabolism;   glycerophospholipid degradation;   phosphoglyceride catabolic process;   phosphoglyceride catabolism

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glycerophospholipid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABHD12 abhydrolase domain containing 12, lysophospholipase involved_in ISO (PMID:25290914) BHF-UCL PMID:25290914
G GDPD1 glycerophosphodiester phosphodiesterase domain containing 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr16:34,150,765...34,208,507
Ensembl chr16:34,151,161...34,207,653 		JBrowse link
G GDPD3 glycerophosphodiester phosphodiesterase domain containing 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 5:26,545,766...26,554,767
Ensembl chr 5:26,546,323...26,554,700 		JBrowse link
G GPCPD1 glycerophosphocholine phosphodiesterase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 2:32,522,953...32,585,204
Ensembl chr 2:32,523,236...32,584,184 		JBrowse link
G LIPC lipase C, hepatic type ISO phosphatidylcholine, phosphatidylethanolamine hydrolysis RGD PMID:9048565 RGD:2308766 NCBI chr26:24,946,843...25,109,338
Ensembl chr26:24,946,673...25,087,921 		JBrowse link
G PLA2G4A phospholipase A2 group IVA involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr25:42,443,480...42,590,895
Ensembl chr25:42,443,385...42,590,431 		JBrowse link
G PLA2G4B phospholipase A2 group IVB involved_in ISO (PMID:10085124) UniProt PMID:10085124 NCBI chr26:41,137,643...41,147,384 JBrowse link
G PLA2G4B phospholipase A2 group IVB involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 Ensembl chr26:41,137,955...41,157,965 JBrowse link
G PLA2G4C phospholipase A2 group IVC involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:41,298,044...41,350,558
Ensembl chr 6:41,297,999...41,346,892 		JBrowse link
G PLA2G4D phospholipase A2 group IVD involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr26:40,895,718...40,923,092
Ensembl chr26:40,897,660...40,922,031 		JBrowse link
G PLA2G4E phospholipase A2 group IVE involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr26:40,938,730...41,001,787
Ensembl chr26:40,939,712...41,001,217 		JBrowse link
G PLA2G4F phospholipase A2 group IVF involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr26:40,835,777...40,852,021
Ensembl chr26:40,836,266...40,852,054 		JBrowse link
G PRDX6 peroxiredoxin 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:55,706,920...55,719,196
Ensembl chr25:55,706,885...55,718,665 		JBrowse link
G SMPD4 sphingomyelin phosphodiesterase 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr10:131,882...162,244
Ensembl chr10:136,784...163,555 		JBrowse link
negative regulation of phosphatidylcholine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOC1 apolipoprotein C1 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr 6:38,386,190...38,387,159 JBrowse link
phosphatidylcholine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENPP2 ectonucleotide pyrophosphatase/phosphodiesterase 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:114,113,780...114,232,656
Ensembl chr 8:114,113,778...114,195,956 		JBrowse link
G GDPD3 glycerophosphodiester phosphodiesterase domain containing 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:26,545,766...26,554,767
Ensembl chr 5:26,546,323...26,554,700 		JBrowse link
G LOC103216568 pancreatic lipase-related protein 2 involved_in ISO (PMID:17401110) UniProt PMID:17401110 NCBI chr 9:109,428,235...109,453,687 JBrowse link
G LOC103228738 group 10 secretory phospholipase A2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:14,135,279...14,160,346
Ensembl chr 5:14,135,338...14,159,885 		JBrowse link
G PLA2G15 phospholipase A2 group XV involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:59,160,396...59,184,472
Ensembl chr 5:59,160,100...59,177,709 		JBrowse link
G PLA2G4A phospholipase A2 group IVA involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:42,443,480...42,590,895
Ensembl chr25:42,443,385...42,590,431 		JBrowse link
G PLA2G5 phospholipase A2 group V involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:112,465,341...112,487,082
Ensembl chr20:112,464,033...112,487,089 		JBrowse link
G PLA2G6 phospholipase A2 group VI involved_in ISO (PMID:20886109) UniProt PMID:20886109 NCBI chr19:20,818,575...20,884,243 JBrowse link
G PLA2G6 phospholipase A2 group VI involved_in IEA Ensembl GO_REF:0000107 Ensembl chr19:20,834,479...20,890,380 JBrowse link
G PLA2G7 phospholipase A2 group VII involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:25,538,645...25,571,230
Ensembl chr17:25,538,438...25,574,269 		JBrowse link
G PLB1 phospholipase B1 involved_in ISO PMID:9442065
PMID:9442064		 UniProt PMID:9442064 PMID:9442065 RGD:30309923 RGD:633237 NCBI chr14:78,960,601...79,122,082
Ensembl chr14:78,960,202...79,096,555 		JBrowse link
G PNPLA7 patatin like phospholipase domain containing 7 involved_in ISO (PMID:28887301) UniProt PMID:28887301 NCBI chr12:655,723...734,315 JBrowse link
G PNPLA7 patatin like phospholipase domain containing 7 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr12:679,749...734,573 JBrowse link
G PNPLA8 patatin like phospholipase domain containing 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:77,385,923...77,437,894
Ensembl chr21:77,385,537...77,437,860 		JBrowse link
phosphatidylethanolamine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PLA2G15 phospholipase A2 group XV involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:59,160,396...59,184,472
Ensembl chr 5:59,160,100...59,177,709 		JBrowse link
G PLB1 phospholipase B1 involved_in ISO PMID:9442064 UniProt PMID:9442064 RGD:30309923 NCBI chr14:78,960,601...79,122,082
Ensembl chr14:78,960,202...79,096,555 		JBrowse link
G PNPLA8 patatin like phospholipase domain containing 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:77,385,923...77,437,894
Ensembl chr21:77,385,537...77,437,860 		JBrowse link
phosphatidylglycerol catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PLA2G4A phospholipase A2 group IVA involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:42,443,480...42,590,895
Ensembl chr25:42,443,385...42,590,431 		JBrowse link
G PLB1 phospholipase B1 involved_in ISO PMID:9442064 UniProt PMID:9442064 RGD:30309923 NCBI chr14:78,960,601...79,122,082
Ensembl chr14:78,960,202...79,096,555 		JBrowse link
phosphatidylinositol catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G INPP5F inositol polyphosphate-5-phosphatase F involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19875726) Ensembl
MGI		 PMID:19875726 GO_REF:0000107 NCBI chr 9:112,517,524...112,621,452
Ensembl chr 9:112,517,724...112,621,685 		JBrowse link
G PLCB1 phospholipase C beta 1 ISO RGD PMID:8387502 RGD:11535163 NCBI chr 2:29,242,601...29,994,238
Ensembl chr 2:29,242,425...29,496,793 		JBrowse link
G PLCB3 phospholipase C beta 3 ISO RGD PMID:8387502 RGD:11535163 NCBI chr 1:9,964,850...9,982,573
Ensembl chr 1:9,966,618...9,982,317 		JBrowse link
G PLCG1 phospholipase C gamma 1 ISO RGD PMID:7812955 RGD:151356942 NCBI chr 2:22,599,547...22,638,394 JBrowse link
phosphatidylserine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABHD12 abhydrolase domain containing 12, lysophospholipase involved_in
acts_upstream_of_or_within		 ISO (PMID:30643283)
(PMID:23297193)		 UniProt
MGI		 PMID:23297193 PMID:30643283
G ABHD12B abhydrolase domain containing 12B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr24:27,952,072...27,987,645
Ensembl chr24:27,953,124...27,987,443 		JBrowse link
G ABHD16A abhydrolase domain containing 16A, phospholipase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr17:40,320,749...40,336,922
Ensembl chr17:40,320,878...40,336,720 		JBrowse link
G ABHD16B abhydrolase domain containing 16B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 2:367,344...370,151
Ensembl chr 2:367,423...368,832 		JBrowse link
platelet activating factor catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC103228738 group 10 secretory phospholipase A2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:14,135,279...14,160,346
Ensembl chr 5:14,135,338...14,159,885 		JBrowse link
G PLA2G7 phospholipase A2 group VII involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:25,538,645...25,571,230
Ensembl chr17:25,538,438...25,574,269 		JBrowse link
regulation of phosphatidylcholine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LDLR low density lipoprotein receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:10,062,204...10,091,780
Ensembl chr 6:10,062,790...10,091,377 		JBrowse link
G SCARB1 scavenger receptor class B member 1 involved_in ISO (PMID:18175806) BHF-UCL PMID:18175806 NCBI chr11:120,134,485...120,223,512
Ensembl chr11:120,134,874...120,216,904 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17042
    cellular process 16561
      metabolic process 10934
        catabolic process 2542
          lipid catabolic process 342
            glycerolipid catabolic process 70
              glycerophospholipid catabolic process 36
                CDP-diacylglycerol catabolic process 0
                phosphatidylcholine catabolic process + 17
                phosphatidylethanolamine catabolic process 3
                phosphatidylglycerol catabolic process 2
                phosphatidylinositol catabolic process + 4
                phosphatidylserine catabolic process 4
                platelet activating factor catabolic process 2
Path 2
Term Annotations click to browse term
  biological_process 17042
    cellular process 16561
      metabolic process 10934
        primary metabolic process 9703
          lipid metabolic process 1329
            phospholipid metabolic process 382
              glycerophospholipid metabolic process 299
                glycerophospholipid catabolic process 36
                  CDP-diacylglycerol catabolic process 0
                  phosphatidylcholine catabolic process + 17
                  phosphatidylethanolamine catabolic process 3
                  phosphatidylglycerol catabolic process 2
                  phosphatidylinositol catabolic process + 4
                  phosphatidylserine catabolic process 4
                  platelet activating factor catabolic process 2
paths to the root