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ONTOLOGY REPORT - ANNOTATIONS


Term:phosphatidylcholine catabolic process
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Accession:GO:0034638 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of phosphatidylcholines, any of a class of glycerophospholipids in which the phosphatidyl group is esterified to the hydroxyl group of choline.
Synonyms:exact_synonym: phosphatidylcholine breakdown;   phosphatidylcholine catabolism;   phosphatidylcholine degradation



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phosphatidylcholine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Enpp2 ectonucleotide pyrophosphatase/phosphodiesterase 2 involved_in IBA
ISO
IDA
PMID:21873635
(PMID:21240271)
(MGI:5050048|PMID:21240269)
RGD PMID:21240269 PMID:21240271 PMID:21873635 PMID:21240271 MGI:5050048, RGD:13792537, RGD:8553522 NCBI chr 7:86,202,345...86,325,050
Ensembl chr 7:86,202,350...86,324,827
JBrowse link
G Gdpd3 glycerophosphodiester phosphodiesterase domain containing 3 involved_in ISO (MGI:5616003|PMID:25528375) RGD PMID:25528375 MGI:5616003 NCBI chr 1:181,373,505...181,383,063
Ensembl chr 1:181,366,626...181,383,063
JBrowse link
G Pla2g10 phospholipase A2, group X involved_in ISO (PMID:12021277) RGD PMID:12021277 NCBI chr10:1,597,761...1,610,822
Ensembl chr10:1,597,761...1,609,000
JBrowse link
G Pla2g15 phospholipase A2, group XV involved_in ISS
ISO
GO_REF:0000024
(MGI:3654404|PMID:16880524), (MGI:3694368|PMID:16837646), (MGI:6392937|PMID:17626977)
UniProt
RGD
PMID:16837646 PMID:16880524 PMID:17626977 GO_REF:0000024 MGI:3654404 MGI:3694368 MGI:6392937 NCBI chr19:34,050,685...34,068,070
Ensembl chr19:34,050,694...34,068,063
JBrowse link
G Pla2g4a phospholipase A2 group IVA involved_in ISO
ISS
(PMID:12672805), (PMID:14709560), (PMID:17472963), (PMID:7794891), (PMID:9425121)
GO_REF:0000024
(MGI:1100763|PMID:9403693)
RGD
UniProt
PMID:7794891 PMID:9403693 PMID:9425121 PMID:12672805 PMID:14709560 More... GO_REF:0000024 MGI:1100763 NCBI chr13:61,877,818...62,022,261
Ensembl chr13:61,877,813...62,022,266
JBrowse link
G Pla2g5 phospholipase A2, group V involved_in ISS
ISO
GO_REF:0000024
(PMID:23533611)
UniProt
RGD
PMID:23533611 GO_REF:0000024 NCBI chr 5:151,041,339...151,109,433
Ensembl chr 5:151,041,340...151,062,658
JBrowse link
G Pla2g6 phospholipase A2 group VI involved_in ISS
ISO
GO_REF:0000024
(PMID:20886109)
UniProt
RGD
PMID:20886109 GO_REF:0000024 NCBI chr 7:110,851,378...110,891,557
Ensembl chr 7:110,851,378...110,891,114
JBrowse link
G Pla2g7 phospholipase A2 group VII involved_in ISO (PMID:2040620) RGD PMID:2040620 NCBI chr 9:17,362,214...17,404,476
Ensembl chr 9:17,362,225...17,404,476
JBrowse link
G Plb1 phospholipase B1 involved_in IDA PMID:9442065
PMID:9442064
UniProt PMID:9442065 PMID:9442064 RGD:633237, RGD:30309923 NCBI chr 6:24,087,051...24,227,167
Ensembl chr 6:24,089,214...24,210,117
JBrowse link
G Pnliprp2 pancreatic lipase related protein 2 involved_in ISO
ISS
(PMID:17401110)
GO_REF:0000024
RGD
UniProt
PMID:17401110 GO_REF:0000024 NCBI chr 1:257,897,766...257,916,434
Ensembl chr 1:257,897,766...257,916,434
JBrowse link
G Pnpla7 patatin-like phospholipase domain containing 7 involved_in ISS
ISO
GO_REF:0000024
(MGI:6393153|PMID:28887301)
UniProt
RGD
PMID:28887301 GO_REF:0000024 MGI:6393153 NCBI chr 3:7,782,572...7,861,504
Ensembl chr 3:7,782,572...7,861,497
JBrowse link
G Pnpla8 patatin-like phospholipase domain containing 8 involved_in ISO (PMID:15695510) RGD PMID:15695510 NCBI chr 6:61,329,810...61,391,736
Ensembl chr 6:61,329,810...61,391,734
JBrowse link
negative regulation of phosphatidylcholine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoc1 apolipoprotein C1 involved_in ISO (PMID:2302419) RGD PMID:2302419 NCBI chr 1:79,347,057...79,350,340
Ensembl chr 1:79,346,136...79,350,375
JBrowse link
regulation of phosphatidylcholine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ldlr low density lipoprotein receptor involved_in ISO (MGI:3784112|PMID:18175806) RGD PMID:18175806 MGI:3784112 NCBI chr 8:20,270,020...20,292,981
Ensembl chr 8:20,270,041...20,294,580
JBrowse link
G Scarb1 scavenger receptor class B, member 1 involved_in ISO (MGI:3784112|PMID:18175806) RGD PMID:18175806 MGI:3784112 NCBI chr12:31,296,143...31,362,649
Ensembl chr12:31,296,156...31,362,647
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20050
    metabolic process 12312
      nitrogen compound metabolic process 10532
        organonitrogen compound metabolic process 7240
          phosphatidylcholine metabolic process 67
            phosphatidylcholine catabolic process 15
              negative regulation of phosphatidylcholine catabolic process 1
              regulation of phosphatidylcholine catabolic process + 3
Path 2
Term Annotations click to browse term
  biological_process 20050
    metabolic process 12312
      cellular metabolic process 10357
        phosphorus metabolic process 2993
          phosphate-containing compound metabolic process 2969
            phospholipid metabolic process 389
              glycerophospholipid metabolic process 292
                phosphatidylcholine metabolic process 67
                  phosphatidylcholine catabolic process 15
                    negative regulation of phosphatidylcholine catabolic process 1
                    regulation of phosphatidylcholine catabolic process + 3
paths to the root