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myofilament - Ontology Report - Rat Genome Database

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ONTOLOGY REPORT - ANNOTATIONS


Term:myofilament
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Accession:GO:0036379 term browser browse the term
Definition:Any of the smallest contractile units of a myofibril (striated muscle fiber).
Synonyms:exact_synonym: striated muscle filament


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myofilament term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mybphl myosin binding protein H like located_in ISO (PMID:28778945) UniProt PMID:28778945 NCBI chrNW_004624772:5,022,255...5,042,891
Ensembl chrNW_004624772:5,024,338...5,042,234
JBrowse link
cardiac Troponin complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tnnc1 troponin C1, slow skeletal and cardiac type part_of ISO (PMID:25771144) CAFA PMID:25771144 NCBI chrNW_004624822:4,763,285...4,767,810
Ensembl chrNW_004624822:4,764,742...4,770,293
JBrowse link
G Tnni3 troponin I3, cardiac type part_of IEA Ensembl GO_REF:0000107 NCBI chrNW_004624832:2,088,455...2,092,774
Ensembl chrNW_004624832:2,088,589...2,092,771
JBrowse link
G Tnnt2 troponin T2, cardiac type part_of ISO (PMID:25771144) CAFA PMID:25771144 NCBI chrNW_004624807:9,332,202...9,348,610
Ensembl chrNW_004624807:9,336,904...9,348,396
JBrowse link
striated muscle myosin thick filament term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mybpc3 myosin binding protein C3 located_in ISO (PMID:10024460)
PMID:8799143
BHF-UCL PMID:8799143 PMID:10024460 RGD:8553425 NCBI chrNW_004624767:1,406,563...1,420,778
Ensembl chrNW_004624767:1,406,587...1,420,436
JBrowse link
G Trim32 tripartite motif containing 32 located_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624760:18,577,764...18,600,869
Ensembl chrNW_004624760:18,585,279...18,599,659
JBrowse link
striated muscle thin filament term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acta1 actin alpha 1, skeletal muscle located_in ISO (PMID:15198992) UniProt PMID:15198992 NCBI chrNW_004624775:19,650,923...19,653,707
Ensembl chrNW_004624775:19,650,822...19,654,730
JBrowse link
G Fhod3 formin homology 2 domain containing 3 located_in ISO PMID:19706596 MGI PMID:19706596 RGD:8554207 NCBI chrNW_004624779:10,562,319...11,069,557
Ensembl chrNW_004624779:10,562,296...11,069,694
JBrowse link
G Lmod1 leiomodin 1 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624807:8,834,462...8,880,048
Ensembl chrNW_004624807:8,833,926...8,881,702
JBrowse link
G Lmod2 leiomodin 2 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624783:12,337,554...12,345,712
Ensembl chrNW_004624783:12,336,535...12,345,781
JBrowse link
G Lmod3 leiomodin 3 located_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624773:3,686,669...3,702,986
Ensembl chrNW_004624773:3,688,478...3,703,179
JBrowse link
G Tmod1 tropomodulin 1 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624825:3,229,095...3,299,709
Ensembl chrNW_004624825:3,228,305...3,299,799
JBrowse link
G Tmod2 tropomodulin 2 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624731:8,575,955...8,612,553
Ensembl chrNW_004624731:8,583,352...8,605,826
JBrowse link
G Tmod3 tropomodulin 3 located_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624731:8,490,157...8,551,867
Ensembl chrNW_004624731:8,494,259...8,531,971
JBrowse link
G Tmod4 tropomodulin 4 located_in IEA TreeGrafter
Ensembl
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624772:18,674,638...18,680,319
Ensembl chrNW_004624772:18,674,861...18,680,317
JBrowse link
G Tnnt2 troponin T2, cardiac type located_in ISO (PMID:12186860) UniProt PMID:12186860 NCBI chrNW_004624807:9,332,202...9,348,610
Ensembl chrNW_004624807:9,336,904...9,348,396
JBrowse link
G Ttn titin located_in ISO (PMID:11717165) BHF-UCL PMID:11717165 NCBI chrNW_004624844:484,593...760,155 JBrowse link
troponin complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tnnc1 troponin C1, slow skeletal and cardiac type part_of ISO (PMID:10850966), (PMID:12093807) UniProt PMID:10850966 PMID:12093807 NCBI chrNW_004624822:4,763,285...4,767,810
Ensembl chrNW_004624822:4,764,742...4,770,293
JBrowse link
G Tnni1 troponin I1, slow skeletal type part_of IEA
ISO
TreeGrafter
InterPro
RGD
PMID:16192301 GO_REF:0000002 GO_REF:0000118 RGD:1599030 NCBI chrNW_004624807:9,295,121...9,306,368
Ensembl chrNW_004624807:9,294,951...9,308,446
JBrowse link
G Tnni2 troponin I2, fast skeletal type part_of IEA
ISO
TreeGrafter
InterPro
RGD
PMID:16192301 GO_REF:0000002 GO_REF:0000118 RGD:1599030 NCBI chrNW_004624767:14,735,413...14,737,968
Ensembl chrNW_004624767:14,736,136...14,737,870
JBrowse link
G Tnni3 troponin I3, cardiac type part_of IEA TreeGrafter
Ensembl
InterPro
GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624832:2,088,455...2,092,774
Ensembl chrNW_004624832:2,088,589...2,092,771
JBrowse link
G Tnnt1 troponin T1, slow skeletal type part_of ISO
IEA
RGD
TreeGrafter
InterPro
PMID:15788488 PMID:16192301 GO_REF:0000002 GO_REF:0000118 RGD:1599030 RGD:1599482 NCBI chrNW_004624832:2,093,852...2,100,647
Ensembl chrNW_004624832:2,094,903...2,100,560
JBrowse link
G Tnnt2 troponin T2, cardiac type part_of ISO
IEA
RGD
InterPro
TreeGrafter
PMID:12501194 GO_REF:0000002 GO_REF:0000118 RGD:1580426 NCBI chrNW_004624807:9,332,202...9,348,610
Ensembl chrNW_004624807:9,336,904...9,348,396
JBrowse link
G Tnnt3 troponin T3, fast skeletal type part_of IEA
ISO
TreeGrafter
InterPro
RGD
PMID:16192301 GO_REF:0000002 GO_REF:0000118 RGD:1599030 NCBI chrNW_004624767:14,784,267...14,801,477
Ensembl chrNW_004624767:14,787,248...14,802,098
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 15780
    cellular anatomical structure 15657
      myofilament 20
        striated muscle myosin thick filament 2
        striated muscle thin filament + 17
Path 2
Term Annotations click to browse term
  cellular_component 15780
    cellular anatomical structure 15657
      intracellular anatomical structure 12396
        intracellular organelle 11029
          intracellular membraneless organelle 4301
            contractile muscle fiber 235
              myofibril 223
                myofilament 20
                  striated muscle myosin thick filament 2
                  striated muscle thin filament + 17
paths to the root