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ONTOLOGY REPORT - ANNOTATIONS


Term:striated muscle thin filament
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Accession:GO:0005865 term browser browse the term
Definition:Filaments formed of actin and associated proteins; attached to Z discs at either end of sarcomeres in myofibrils.


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striated muscle thin filament term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acta1 actin, alpha 1, skeletal muscle located_in
is_active_in
ISO
IBA
ISS
(PMID:15198992)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:15198992 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr19:51,883,713...51,886,725
Ensembl chr19:51,883,715...51,886,742
JBrowse link
G Fhod3 formin homology 2 domain containing 3 located_in IDA PMID:19706596 MGI PMID:19706596 RGD:8554207 NCBI chr18:15,993,079...16,425,796
Ensembl chr18:15,993,324...16,425,796
JBrowse link
G Lmod1 leiomodin 1 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:46,754,048...46,796,186
Ensembl chr13:46,754,033...46,794,900
JBrowse link
G Lmod2 leiomodin 2 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:53,067,428...53,075,124
Ensembl chr 4:53,067,428...53,075,120
JBrowse link
G Lmod3 leiomodin 3 located_in
is_active_in
ISO
IBA
(PMID:25250574)
PMID:21873635
RGD PMID:25250574 PMID:21873635 RGD:13792537 NCBI chr 4:129,843,964...129,858,684
Ensembl chr 4:129,843,970...129,858,244
JBrowse link
G Tmod1 tropomodulin 1 located_in
is_active_in
IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
(PMID:25250574)
Ensembl
RGD
PMID:25250574 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 5:60,316,445...60,393,957
Ensembl chr 5:60,338,512...60,393,956
JBrowse link
G Tmod2 tropomodulin 2 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:76,316,736...76,366,003
Ensembl chr 8:76,325,667...76,365,720
JBrowse link
G Tmod3 tropomodulin 3 located_in
is_active_in
ISO
IBA
(MGI:4440662|PMID:20368620)
PMID:21873635
RGD PMID:20368620 PMID:21873635 MGI:4440662, RGD:13792537 NCBI chr 8:76,248,978...76,310,855
Ensembl chr 8:76,248,979...76,310,977
JBrowse link
G Tmod4 tropomodulin 4 located_in
is_active_in
ISO
IBA
(PMID:25250574)
PMID:21873635
(MGI:4440662|PMID:20368620)
RGD PMID:20368620 PMID:25250574 PMID:21873635 MGI:4440662, RGD:13792537 NCBI chr 2:182,695,709...182,700,540
Ensembl chr 2:182,695,709...182,700,540
JBrowse link
G Tnnt2 troponin T2, cardiac type located_in ISS
ISO
GO_REF:0000024
(PMID:12186860)
UniProt
RGD
PMID:12186860 GO_REF:0000024 NCBI chr13:47,267,325...47,285,390
Ensembl chr13:47,267,204...47,285,388
JBrowse link
G Ttn titin located_in ISO (PMID:11717165) RGD PMID:11717165 NCBI chr 3:61,652,432...61,924,912 JBrowse link
cardiac Troponin complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tnnc1 troponin C1, slow skeletal and cardiac type part_of ISO (PMID:25771144) RGD PMID:25771144 NCBI chr16:6,400,801...6,405,419
Ensembl chr16:6,402,171...6,405,634
JBrowse link
G Tnni3 troponin I3, cardiac type part_of ISO (PMID:25771144) RGD PMID:25771144 NCBI chr 1:69,299,900...69,303,582
Ensembl chr 1:69,299,900...69,303,580
JBrowse link
G Tnnt2 troponin T2, cardiac type part_of ISO (PMID:25771144) RGD PMID:25771144 NCBI chr13:47,267,325...47,285,390
Ensembl chr13:47,267,204...47,285,388
JBrowse link
troponin complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07013776.1 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 2:239,898,492...239,898,935 JBrowse link
G Tnnc1 troponin C1, slow skeletal and cardiac type part_of ISO
IBA
(PMID:10850966), (PMID:12093807)
PMID:21873635
RGD PMID:10850966 PMID:12093807 PMID:21873635 RGD:13792537 NCBI chr16:6,400,801...6,405,419
Ensembl chr16:6,402,171...6,405,634
JBrowse link
G Tnnc2 troponin C2, fast skeletal type part_of IBA
ISO
PMID:21873635
(PMID:17194691)
RGD PMID:17194691 PMID:21873635 RGD:13792537 NCBI chr 3:153,513,272...153,516,033
Ensembl chr 3:153,513,271...153,516,029
JBrowse link
G Tnni1 troponin I1, slow skeletal type part_of IDA
IEA
GO_REF:0000002 InterPro PMID:16192301 GO_REF:0000002, RGD:1599030 NCBI chr13:47,229,217...47,241,640
Ensembl chr13:47,229,216...47,241,644
JBrowse link
G Tnni2 troponin I2, fast skeletal type part_of IDA
IEA
ISO
GO_REF:0000002
(PMID:17194691)
InterPro
RGD
PMID:17194691 PMID:16192301 GO_REF:0000002, RGD:1599030 NCBI chr 1:197,595,012...197,597,554
Ensembl chr 1:197,594,813...197,597,560
JBrowse link
G Tnni3 troponin I3, cardiac type part_of TAS
ISO
(PMID:10806205), (PMID:10850966), (PMID:12093807), (PMID:7957210) RGD PMID:7957210 PMID:10806205 PMID:10850966 PMID:12093807 PMID:1886137 RGD:730167 NCBI chr 1:69,299,900...69,303,582
Ensembl chr 1:69,299,900...69,303,580
JBrowse link
G Tnnt1 troponin T1, slow skeletal type part_of IDA
IBA
ISO
PMID:21873635
(PMID:15665378), (PMID:18032382)
RGD PMID:15665378 PMID:18032382 PMID:16192301 PMID:21873635 PMID:15788488 RGD:1599030, RGD:13792537, RGD:1599482 NCBI chr 1:69,306,362...69,316,721
Ensembl chr 1:69,306,362...69,316,721
JBrowse link
G Tnnt2 troponin T2, cardiac type part_of IDA
ISO
IBA
IEA
(MGI:2675179|PMID:12832403)
PMID:21873635
GO_REF:0000002
(PMID:12186860)
(PMID:12093807), (PMID:2530435)
RGD
InterPro
PMID:2530435 PMID:12093807 PMID:12186860 PMID:12832403 PMID:12501194 More... GO_REF:0000002 MGI:2675179, RGD:1580426, RGD:13792537 NCBI chr13:47,267,325...47,285,390
Ensembl chr13:47,267,204...47,285,388
JBrowse link
G Tnnt3 troponin T3, fast skeletal type part_of TAS
IEA
IBA
ISO
IDA
GO_REF:0000107
PMID:21873635
GO_REF:0000002
(PMID:17194691), (PMID:8987992), (PMID:9724539)
Ensembl
InterPro
RGD
PMID:8987992 PMID:9724539 PMID:17194691 PMID:11940518 PMID:21873635 More... GO_REF:0000002 GO_REF:0000107, RGD:1299083, RGD:13792537, RGD:1599030 NCBI chr 1:197,652,535...197,669,736
Ensembl chr 1:197,652,431...197,669,535
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20010
    cellular anatomical entity 19714
      sarcomere 209
        striated muscle thin filament 19
          muscle thin filament tropomyosin 0
          troponin complex + 9
Path 2
Term Annotations click to browse term
  cellular_component 20010
    cellular anatomical entity 19714
      supramolecular complex 1251
        supramolecular polymer 928
          supramolecular fiber 921
            contractile fiber 245
              myofibril 235
                sarcomere 209
                  striated muscle thin filament 19
                    muscle thin filament tropomyosin 0
                    troponin complex + 9
paths to the root