.
pICln-Sm protein complex - Ontology Report - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

ONTOLOGY REPORT - ANNOTATIONS

Term:pICln-Sm protein complex
go back to main search page
Accession:GO:0034715 term browser browse the term
Definition:A protein complex that contains pICln (CLNS1A) and several Sm proteins, including SmD1, SmD2, SmE, SmF, and SmG.
Synonyms:exact_synonym: 6S pICln complex

 Loading Annotations... 
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
X

show annotations for term's descendants           Sort by:
pICln-Sm protein complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clns1a chloride nucleotide-sensitive channel 1A part_of ISO
ISS
IEA
IBA		 (PMID:18984161)
GO_REF:0000024
GO_REF:0000002
GO_REF:0000033
GO_REF:0000107		 RGD
UniProt
InterPro
GO_Central
Ensembl		 PMID:18984161 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:161,429,437...161,450,904
Ensembl chr 1:152,019,378...152,039,661 		JBrowse link
G ENSRNOG00000063412 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr  X:133,163,165...133,163,784 JBrowse link
G ENSRNOG00000064062 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 Ensembl chr19:33,454,456...33,455,388 JBrowse link
G ENSRNOG00000068015 part_of IBA
IEA		 GO_REF:0000033
GO_REF:0000002		 GO_Central
InterPro		 GO_REF:0000002 GO_REF:0000033 Ensembl chr  X:133,878,251...133,878,959 JBrowse link
G LOC108350623 small nuclear ribonucleoprotein F-like part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:175,535,569...175,535,921
Ensembl chr 3:155,116,174...155,116,769 		JBrowse link
G LOC108352309 small nuclear ribonucleoprotein F-like part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:47,003,259...47,003,552
Ensembl chr11:33,533,512...33,533,871 		JBrowse link
G Snrpd1 small nuclear ribonucleoprotein D1 polypeptide part_of ISO
IEA		 (PMID:18984161)
GO_REF:0000107		 RGD
Ensembl		 PMID:18984161 GO_REF:0000107 NCBI chr18:1,969,351...1,980,207
Ensembl chr18:1,696,852...1,708,256 		JBrowse link
G Snrpd2 small nuclear ribonucleoprotein D2 polypeptide part_of ISO
IBA		 (PMID:18984161)
GO_REF:0000033		 RGD
GO_Central		 PMID:18984161 GO_REF:0000033 NCBI chr 1:87,926,030...87,929,259
Ensembl chr 1:78,798,377...78,803,351
Ensembl chr20:78,798,377...78,803,351 		JBrowse link
G Snrpd3 small nuclear ribonucleoprotein D3 polypeptide part_of ISO (PMID:18984161) RGD PMID:18984161 NCBI chr20:13,129,555...13,145,100
Ensembl chr20:13,130,119...13,145,978 		JBrowse link
G Snrpe small nuclear ribonucleoprotein polypeptide E part_of ISO
IBA		 (PMID:18984161)
GO_REF:0000033		 RGD
GO_Central		 PMID:18984161 GO_REF:0000033 NCBI chr13:47,596,324...47,609,390
Ensembl chr13:45,050,986...45,057,310
Ensembl chr 8:45,050,986...45,057,310 		JBrowse link
G Snrpepl2 small nuclear ribonucleoprotein polypeptide E like 2 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:143,118,973...143,119,454
Ensembl chr 1:133,709,797...133,710,075 		JBrowse link
G Snrpf small nuclear ribonucleoprotein polypeptide F part_of ISO
IBA
IEA		 (PMID:18984161)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:18984161 GO_REF:0000033 GO_REF:0000107 NCBI chr 7:30,017,460...30,024,162
Ensembl chr 7:28,130,427...28,137,129 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 21366
    cellular anatomical structure 21071
      cytoplasm 12301
        pICln-Sm protein complex 12
Path 2
Term Annotations click to browse term
  cellular_component 21366
    cellular anatomical structure 21071
      intracellular anatomical structure 15592
        cytoplasm 12301
          pICln-Sm protein complex 12
paths to the root