Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

ONTOLOGY REPORT - ANNOTATIONS

Term:lipid droplet organization
go back to main search page
Accession:GO:0034389 term browser browse the term
Definition:A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a lipid particle.
Synonyms:exact_synonym: adiposome organization;   lipid body organization;   lipid particle organisation;   lipid particle organization
 related_synonym: lipid particle organization and biogenesis
 xref: Reactome:R-HSA-8964572 "Lipid particle organization"

GViewer not supported for the selected species.

show annotations for term's descendants           Sort by:
lipid droplet organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aup1 AUP1 lipid droplet regulating VLDL assembly factor involved_in ISO (PMID:24039768) UniProt PMID:24039768 NCBI chrNW_004955424:11,259,288...11,262,413
Ensembl chrNW_004955424:11,259,432...11,262,269 		JBrowse link
G Bscl2 BSCL2 lipid droplet biogenesis associated, seipin acts_upstream_of_or_within
involved_in		 ISO (PMID:24778225)
(PMID:27806294)
(PMID:19278620)		 MGI
UniProt		 PMID:19278620 PMID:24778225 PMID:27806294 NCBI chrNW_004955599:505,725...514,225
Ensembl chrNW_004955599:507,501...514,151 		JBrowse link
G Cidec cell death inducing DFFA like effector c involved_in ISO (PMID:20049731) UniProt PMID:20049731 NCBI chrNW_004955561:1,363,907...1,376,144 JBrowse link
G Ddhd2 DDHD domain containing 2 acts_upstream_of_or_within
involved_in		 ISO (PMID:25267624) MGI PMID:25267624 NCBI chrNW_004955463:13,836,401...13,856,430
Ensembl chrNW_004955463:13,836,409...13,856,431 		JBrowse link
G Faf2 Fas associated factor family member 2 acts_upstream_of_or_within ISO (PMID:23297223) MGI PMID:23297223 NCBI chrNW_004955408:28,737,597...28,797,143
Ensembl chrNW_004955408:28,737,279...28,797,564 		JBrowse link
G Fitm1 fat storage inducing transmembrane protein 1 involved_in ISO (PMID:18160536) BHF-UCL PMID:18160536 NCBI chrNW_004955409:36,267,121...36,268,462
Ensembl chrNW_004955409:36,267,121...36,268,462 		JBrowse link
G Fitm2 fat storage inducing transmembrane protein 2 involved_in ISO (PMID:20520733)
(PMID:18160536)		 UniProt
BHF-UCL		 PMID:18160536 PMID:20520733 NCBI chrNW_004955445:13,027,431...13,032,089 JBrowse link
G Plin5 perilipin 5 involved_in ISO (PMID:22532565) UniProt PMID:22532565 NCBI chrNW_004955495:4,406,590...4,414,783
Ensembl chrNW_004955495:4,407,246...4,416,848 		JBrowse link
G Pnpla2 patatin like phospholipase domain containing 2 acts_upstream_of_or_within ISO (PMID:23297223) MGI PMID:23297223 NCBI chrNW_004955476:11,304,660...11,309,755
Ensembl chrNW_004955476:11,303,843...11,309,181 		JBrowse link
G Pnpla3 patatin like phospholipase domain containing 3 involved_in ISO (PMID:23398201) BHF-UCL PMID:23398201 NCBI chrNW_004955413:28,879,646...28,896,224
Ensembl chrNW_004955413:28,879,748...28,893,938 		JBrowse link
G Ppia peptidylprolyl isomerase A involved_in ISO (PMID:21711559) UniProt PMID:21711559 NCBI chrNW_004955456:7,381,923...7,383,203 JBrowse link
G Ppid peptidylprolyl isomerase D involved_in ISO (PMID:21711559) UniProt PMID:21711559 NCBI chrNW_004955471:12,309,224...12,323,198
Ensembl chrNW_004955471:12,305,236...12,323,198 		JBrowse link
G Ptgfrn prostaglandin F2 receptor inhibitor acts_upstream_of_or_within ISO (PMID:9643346) MGI PMID:9643346 NCBI chrNW_004955435:20,046,712...20,092,051
Ensembl chrNW_004955435:20,046,712...20,092,051 		JBrowse link
G Rab18 RAB18, member RAS oncogene family acts_upstream_of_or_within ISO (PMID:24239381) MGI PMID:24239381 NCBI chrNW_004955462:1,380,158...1,411,804
Ensembl chrNW_004955462:1,380,156...1,411,804 		JBrowse link
G Rab3gap1 RAB3 GTPase activating protein catalytic subunit 1 acts_upstream_of_or_within ISO (PMID:24239381) MGI PMID:24239381 NCBI chrNW_004955440:2,551,015...2,645,938
Ensembl chrNW_004955440:2,550,982...2,646,331 		JBrowse link
G Spart spartin acts_upstream_of_or_within ISO (PMID:22619377) MGI PMID:22619377 NCBI chrNW_004955431:9,758,159...9,786,468
Ensembl chrNW_004955431:9,758,053...9,786,644 		JBrowse link
G Tbc1d20 TBC1 domain family member 20 acts_upstream_of_or_within ISO (PMID:24239381) MGI PMID:24239381 NCBI chrNW_004955597:291,541...313,799
Ensembl chrNW_004955597:291,541...314,292 		JBrowse link
G Tspo2 translocator protein 2 involved_in ISO (PMID:32358067) UniProt PMID:32358067 NCBI chrNW_004955437:7,714,107...7,715,796
Ensembl chrNW_004955437:7,714,107...7,715,796 		JBrowse link
lipid droplet disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chka choline kinase alpha acts_upstream_of_positive_effect ISO (PMID:34077757) UniProt PMID:34077757 NCBI chrNW_004955422:17,710,981...17,766,256
Ensembl chrNW_004955422:17,710,434...17,766,256 		JBrowse link
G Kat5 lysine acetyltransferase 5 acts_upstream_of_positive_effect ISO (PMID:34077757) UniProt PMID:34077757 NCBI chrNW_004955422:19,557,498...19,565,044
Ensembl chrNW_004955422:19,557,498...19,565,036 		JBrowse link
G Plin2 perilipin 2 involved_in ISO (PMID:34077757) UniProt PMID:34077757 NCBI chrNW_004955434:21,573,860...21,580,990
Ensembl chrNW_004955434:21,574,292...21,580,988 		JBrowse link
G Plin3 perilipin 3 involved_in ISO (PMID:34077757) UniProt PMID:34077757 NCBI chrNW_004955495:4,177,701...4,190,052
Ensembl chrNW_004955495:4,177,906...4,193,299 		JBrowse link
G Pnpla2 patatin like phospholipase domain containing 2 involved_in ISO (PMID:16239926) UniProt PMID:16239926 NCBI chrNW_004955476:11,304,660...11,309,755
Ensembl chrNW_004955476:11,303,843...11,309,181 		JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 acts_upstream_of_positive_effect ISO (PMID:34077757) UniProt PMID:34077757 NCBI chrNW_004955426:25,079,718...25,102,090
Ensembl chrNW_004955426:25,079,718...25,102,090 		JBrowse link
G Prkaa2 protein kinase AMP-activated catalytic subunit alpha 2 acts_upstream_of_positive_effect ISO (PMID:34077757) UniProt PMID:34077757 NCBI chrNW_004955464:2,996,608...3,062,197
Ensembl chrNW_004955464:3,003,837...3,062,197 		JBrowse link
lipid droplet formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aup1 AUP1 lipid droplet regulating VLDL assembly factor involved_in ISO (PMID:21857022) UniProt PMID:21857022 NCBI chrNW_004955424:11,259,288...11,262,413
Ensembl chrNW_004955424:11,259,432...11,262,269 		JBrowse link
G Bscl2 BSCL2 lipid droplet biogenesis associated, seipin involved_in
acts_upstream_of_or_within		 ISO (PMID:27564575), (PMID:27879284)
(PMID:23458123)
(PMID:31178403), (PMID:31708432)		 UniProt
MGI		 PMID:23458123 PMID:27564575 PMID:27879284 PMID:31178403 PMID:31708432 NCBI chrNW_004955599:505,725...514,225
Ensembl chrNW_004955599:507,501...514,151 		JBrowse link
G Cds1 CDP-diacylglycerol synthase 1 involved_in ISO (PMID:26946540)
(PMID:26946540), (PMID:31548309)		 UniProt PMID:26946540 PMID:31548309 NCBI chrNW_004955474:5,057,833...5,104,235
Ensembl chrNW_004955474:5,057,833...5,104,235 		JBrowse link
G Cds2 CDP-diacylglycerol synthase 2 involved_in ISO (PMID:26946540)
(PMID:26946540), (PMID:31548309)		 UniProt PMID:26946540 PMID:31548309 NCBI chrNW_004955415:15,762,672...15,806,454
Ensembl chrNW_004955415:15,792,239...15,806,454 		JBrowse link
G Fitm1 fat storage inducing transmembrane protein 1 involved_in ISO (PMID:22106267) UniProt PMID:22106267 NCBI chrNW_004955409:36,267,121...36,268,462
Ensembl chrNW_004955409:36,267,121...36,268,462 		JBrowse link
G Fitm2 fat storage inducing transmembrane protein 2 involved_in ISO (PMID:26504167)
(PMID:32915949)
(PMID:22106267)		 UniProt PMID:22106267 PMID:26504167 PMID:32915949 NCBI chrNW_004955445:13,027,431...13,032,089 JBrowse link
G Ldaf1 lipid droplet assembly factor 1 involved_in ISO (PMID:31708432) UniProt PMID:31708432 NCBI chrNW_004955493:368,399...386,651
Ensembl chrNW_004955493:368,399...386,716 		JBrowse link
G Mospd2 motile sperm domain containing 2 involved_in ISO (PMID:35389430) UniProt PMID:35389430 NCBI chrNW_004955519:3,290,137...3,336,817
Ensembl chrNW_004955519:3,286,847...3,337,286 		JBrowse link
G Negr1 neuronal growth regulator 1 acts_upstream_of_or_within ISO (PMID:31086253) MGI PMID:31086253 NCBI chrNW_004955423:20,011,488...20,816,686
Ensembl chrNW_004955423:20,011,615...20,813,879 		JBrowse link
G Pisd phosphatidylserine decarboxylase involved_in ISO (PMID:33593792) UniProt PMID:33593792 NCBI chrNW_004955455:5,744,816...5,789,408
Ensembl chrNW_004955455:5,744,816...5,789,534 		JBrowse link
G Pla2g4c phospholipase A2 group IVC involved_in ISO (PMID:28336330) UniProt PMID:28336330 NCBI chrNW_004955609:182,706...212,102 JBrowse link
G Rnf213 ring finger protein 213 involved_in ISO (PMID:30705059) UniProt PMID:30705059 NCBI chrNW_004955506:2,498,339...2,598,363
Ensembl chrNW_004955506:2,499,770...2,596,989 		JBrowse link
G Smim22 small integral membrane protein 22 involved_in ISO (PMID:29765154) UniProt PMID:29765154 NCBI chrNW_004955442:12,700,461...12,701,283
Ensembl chrNW_004955442:12,700,461...12,701,283 		JBrowse link
G Sqle squalene epoxidase involved_in ISO (PMID:29765154) UniProt PMID:29765154 NCBI chrNW_004955461:121,886...143,389
Ensembl chrNW_004955461:122,528...143,064 		JBrowse link
G Zfyve1 zinc finger FYVE-type containing 1 involved_in ISO (PMID:30970241) UniProt PMID:30970241 NCBI chrNW_004955523:2,334,175...2,388,612
Ensembl chrNW_004955523:2,334,175...2,388,612 		JBrowse link
lipid droplet fusion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cidea cell death inducing DFFA like effector a involved_in ISO (PMID:22144693), (PMID:26609809), (PMID:26733203), (PMID:36477540)
(PMID:19843876)		 UniProt PMID:19843876 PMID:22144693 PMID:26609809 PMID:26733203 PMID:36477540 NCBI chrNW_004955402:1,090,372...1,096,621
Ensembl chrNW_004955402:1,090,518...1,096,569 		JBrowse link
G Cideb cell death inducing DFFA like effector b involved_in ISO (PMID:19187774), (PMID:26733203)
(PMID:17646209)
(PMID:35939579)		 UniProt PMID:17646209 PMID:19187774 PMID:26733203 PMID:35939579 NCBI chrNW_004955409:35,993,853...35,996,935
Ensembl chrNW_004955409:35,993,853...35,996,935 		JBrowse link
G Cidec cell death inducing DFFA like effector c involved_in ISO (PMID:23399566), (PMID:30361435)
(PMID:22144693), (PMID:23481402), (PMID:26733203), (PMID:30361435), (PMID:34508658), (PMID:36477540)		 UniProt PMID:22144693 PMID:23399566 PMID:23481402 PMID:26733203 PMID:30361435 More... NCBI chrNW_004955561:1,363,907...1,376,144 JBrowse link
G Ldah lipid droplet associated hydrolase acts_upstream_of_positive_effect
involved_in		 ISO (PMID:28578400) UniProt PMID:28578400 NCBI chrNW_004955469:3,161,691...3,277,018
Ensembl chrNW_004955469:3,160,497...3,272,643 		JBrowse link
G Pnpla2 patatin like phospholipase domain containing 2 acts_upstream_of_negative_effect ISO (PMID:28578400) UniProt PMID:28578400 NCBI chrNW_004955476:11,304,660...11,309,755
Ensembl chrNW_004955476:11,303,843...11,309,181 		JBrowse link
negative regulation of lipid droplet fusion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clstn3 calsyntenin 3 involved_in ISO (PMID:36477540) UniProt PMID:36477540 NCBI chrNW_004955413:4,690,637...4,719,929
Ensembl chrNW_004955413:4,690,637...4,719,929 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12563
    cellular process 12002
      cellular component organization or biogenesis 5407
        cellular component organization 5279
          organelle organization 2891
            lipid droplet organization 39
              lipid droplet disassembly 7
              lipid droplet formation 15
              lipid droplet fusion + 6
paths to the root