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ONTOLOGY REPORT - ANNOTATIONS

Term:response to muramyl dipeptide
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Accession:GO:0032495 term browser browse the term
Definition:Any process that results in a change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a muramyl dipeptide stimulus. Muramyl dipeptide is derived from peptidoglycan.

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response to muramyl dipeptide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Card9 caspase recruitment domain family member 9 acts_upstream_of_or_within ISO (PMID:17187069) MGI PMID:17187069 NCBI chrNW_004955513:4,350,873...4,359,345
Ensembl chrNW_004955513:4,350,147...4,359,345 		JBrowse link
G Erbin erbb2 interacting protein involved_in ISO (PMID:16203728) UniProt PMID:16203728 NCBI chrNW_004955446:3,046,268...3,151,796
Ensembl chrNW_004955446:3,049,258...3,151,796 		JBrowse link
G Inava innate immunity activator involved_in ISO (PMID:28436939) UniProt PMID:28436939 NCBI chrNW_004955406:37,086,302...37,107,221
Ensembl chrNW_004955406:37,086,302...37,107,221 		JBrowse link
G Jag1 jagged canonical Notch ligand 1 involved_in ISO (MGI:4946442|PMID:21156799) BHF-UCL PMID:21156799 MGI:4946442 NCBI chrNW_004955415:20,490,414...20,526,068
Ensembl chrNW_004955415:20,490,414...20,527,917 		JBrowse link
G Mapk14 mitogen-activated protein kinase 14 acts_upstream_of_or_within ISO (PMID:15692051) MGI PMID:15692051 NCBI chrNW_004955437:3,836,331...3,884,083
Ensembl chrNW_004955437:3,838,232...3,884,083 		JBrowse link
G Nagk N-acetylglucosamine kinase involved_in ISO (PMID:36002575) UniProt PMID:36002575 NCBI chrNW_004955424:14,205,689...14,215,201
Ensembl chrNW_004955424:14,205,813...14,215,156 		JBrowse link
G Nfkbia NFKB inhibitor alpha acts_upstream_of_or_within ISO (PMID:15692051) MGI PMID:15692051 NCBI chrNW_004955409:25,691,673...25,695,151
Ensembl chrNW_004955409:25,691,534...25,697,520 		JBrowse link
G Nod2 nucleotide binding oligomerization domain containing 2 acts_upstream_of_or_within
involved_in		 ISO (PMID:15692051)
(PMID:15220916)
(PMID:14560001), (PMID:15220916)
(PMID:12514169), (PMID:12626759), (PMID:15044951), (PMID:15998797), (PMID:16414084), (PMID:17355968), (PMID:27283905), (PMID:31649195)
(MGI:3529429|PMID:15692052), (MGI:5763542|PMID:25429073)
(MGI:4943384|PMID:18511561), (MGI:7261484|PMID:35420957)
(PMID:24790089)		 RGD
MGI
UniProt		 PMID:12514169 PMID:12626759 PMID:14560001 PMID:15044951 PMID:15220916 More... MGI:3529429 MGI:4943384 MGI:5763542 MGI:7261484 RGD:1643119 NCBI chrNW_004955433:8,746,213...8,780,119
Ensembl chrNW_004955433:8,746,004...8,782,710 		JBrowse link
G Notch1 notch receptor 1 involved_in ISO (MGI:4946442|PMID:21156799) BHF-UCL PMID:21156799 MGI:4946442 NCBI chrNW_004955513:4,225,939...4,264,875
Ensembl chrNW_004955513:4,225,956...4,263,259 		JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit acts_upstream_of_or_within ISO (PMID:12527755) MGI PMID:12527755 NCBI chrNW_004955422:19,602,930...19,612,263
Ensembl chrNW_004955422:19,603,345...19,611,516 		JBrowse link
G Tnfaip3 TNF alpha induced protein 3 involved_in ISO (MGI:3777503|PMID:18342009) BHF-UCL PMID:18342009 MGI:3777503 NCBI chrNW_004955436:21,566,591...21,581,551
Ensembl chrNW_004955436:21,566,423...21,578,469 		JBrowse link
cellular response to muramyl dipeptide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arhgef2 Rho/Rac guanine nucleotide exchange factor 2 involved_in ISO (PMID:21887730) UniProt PMID:21887730 NCBI chrNW_004955545:2,149,107...2,192,986
Ensembl chrNW_004955545:2,149,107...2,197,153 		JBrowse link
G Ldoc1 LDOC1 regulator of NFKB signaling involved_in ISO (PMID:27812135) UniProt PMID:27812135 NCBI chrNW_004955539:127,705...129,147
Ensembl chrNW_004955539:127,887...128,324 		JBrowse link
G Nod1 nucleotide binding oligomerization domain containing 1 involved_in ISO (PMID:25093298) UniProt PMID:25093298 NCBI chrNW_004955410:31,681,191...31,725,173
Ensembl chrNW_004955410:31,681,077...31,725,173 		JBrowse link
G Nod2 nucleotide binding oligomerization domain containing 2 involved_in ISO (PMID:25093298), (PMID:27812135)
(PMID:21887730)		 UniProt PMID:21887730 PMID:25093298 PMID:27812135 NCBI chrNW_004955433:8,746,213...8,780,119
Ensembl chrNW_004955433:8,746,004...8,782,710 		JBrowse link
G Ptpn22 protein tyrosine phosphatase non-receptor type 22 involved_in ISO (PMID:23991106)
(MGI:5640942|PMID:23991106)		 UniProt PMID:23991106 MGI:5640942 NCBI chrNW_004955435:17,082,762...17,139,067 JBrowse link
G Ripk2 receptor interacting serine/threonine kinase 2 involved_in ISO (PMID:21887730)
(MGI:7484276|PMID:17947236)		 UniProt PMID:17947236 PMID:21887730 MGI:7484276 NCBI chrNW_004955417:6,669,675...6,698,142
Ensembl chrNW_004955417:6,669,675...6,702,228 		JBrowse link
G Trim41 tripartite motif containing 41 involved_in ISO (PMID:27812135) UniProt PMID:27812135 NCBI chrNW_004955530:84,683...95,835
Ensembl chrNW_004955530:84,683...95,835 		JBrowse link
G Vim vimentin involved_in ISO (PMID:27812135) UniProt PMID:27812135 NCBI chrNW_004955429:10,708,852...10,716,743
Ensembl chrNW_004955429:10,707,719...10,717,554 		JBrowse link
detection of muramyl dipeptide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nod2 nucleotide binding oligomerization domain containing 2 involved_in
acts_upstream_of_or_within		 ISO (PMID:15998797)
(PMID:12527755)		 HGNC-UCL
MGI		 PMID:12527755 PMID:15998797 NCBI chrNW_004955433:8,746,213...8,780,119
Ensembl chrNW_004955433:8,746,004...8,782,710 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12362
    response to stimulus 6684
      response to chemical 3562
        response to oxygen-containing compound 1986
          response to muramyl dipeptide 18
            cellular response to muramyl dipeptide 8
            detection of muramyl dipeptide 1
Path 2
Term Annotations click to browse term
  biological_process 12362
    response to stimulus 6684
      response to chemical 3562
        response to organic substance 2851
          response to organonitrogen compound 1233
            response to muramyl dipeptide 18
              cellular response to muramyl dipeptide 8
              detection of muramyl dipeptide 1
paths to the root