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ONTOLOGY REPORT - ANNOTATIONS

Term:nuclear-transcribed mRNA catabolic process, deadenylation-independent decay
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Accession:GO:0031086 term browser browse the term
Definition:A pathway of degradation of nuclear-transcribed mRNAs that proceeds through a series of steps that is independent of deadenylation, but requires decapping followed by transcript decay, and that can regulate mRNA stability.
Synonyms:exact_synonym: deadenylation-independent mRNA decay;   deadenylylation-independent mRNA decay;   mRNA breakdown, deadenylation-independent decay;   mRNA catabolic process, deadenylation-independent;   mRNA catabolic process, deadenylylation-independent;   mRNA catabolism, deadenylation-independent;   mRNA catabolism, deadenylation-independent decay;   mRNA catabolism, deadenylylation-independent;   mRNA degradation, deadenylation-independent decay;   nuclear mRNA catabolic process, deadenylation-independent decay


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nuclear-transcribed mRNA catabolic process, deadenylation-independent decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Zfp36 zinc finger protein 36 involved_in ISS
ISO		 UniProt
GO_Central		 GO_REF:0000024 GO_REF:0000119 NCBI chr 7:28,076,208...28,078,680
Ensembl chr 7:28,076,209...28,079,678 		JBrowse link
G Zfp36l1 zinc finger protein 36, C3H type-like 1 involved_in ISO
ISS		 GO_Central
UniProt		 GO_REF:0000024 GO_REF:0000096 NCBI chr12:80,154,534...80,159,787
Ensembl chr12:80,154,528...80,159,787 		JBrowse link
deadenylation-independent decapping of nuclear-transcribed mRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dcp1a decapping mRNA 1A involved_in IBA GO_Central GO_REF:0000033 NCBI chr14:30,201,613...30,249,013
Ensembl chr14:30,201,492...30,249,020 		JBrowse link
G Dcp1b decapping mRNA 1B involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:119,152,214...119,198,575
Ensembl chr 6:119,152,214...119,198,577 		JBrowse link
G Edc3 enhancer of mRNA decapping 3 involved_in IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr 9:57,615,823...57,659,782
Ensembl chr 9:57,615,823...57,659,782 		JBrowse link
G Edc4 enhancer of mRNA decapping 4 involved_in IBA
IEA		 GO_Central
InterPro		 GO_REF:0000002 GO_REF:0000033 NCBI chr 8:106,607,506...106,619,857
Ensembl chr 8:106,607,513...106,621,540 		JBrowse link
positive regulation of deadenylation-independent decapping of nuclear-transcribed mRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Zfp36 zinc finger protein 36 involved_in ISO
ISS		 GO_Central
UniProt		 GO_REF:0000024 GO_REF:0000119 NCBI chr 7:28,076,208...28,078,680
Ensembl chr 7:28,076,209...28,079,678 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 28635
    cellular process 18392
      metabolic process 11624
        macromolecule metabolic process 9569
          nucleic acid metabolic process 5155
            RNA metabolic process 4608
              RNA catabolic process 420
                mRNA catabolic process 363
                  nuclear-transcribed mRNA catabolic process 128
                    nuclear-transcribed mRNA catabolic process, deadenylation-independent decay 6
                      deadenylation-independent decapping of nuclear-transcribed mRNA + 5
Path 2
Term Annotations click to browse term
  biological_process 28635
    biological regulation 13450
      regulation of biological process 13009
        regulation of cellular process 12632
          negative regulation of cellular process 5852
            negative regulation of metabolic process 3351
              negative regulation of biosynthetic process 2686
                negative regulation of macromolecule biosynthetic process 2590
                  negative regulation of gene expression 1530
                    mRNA catabolic process 363
                      nuclear-transcribed mRNA catabolic process 128
                        nuclear-transcribed mRNA catabolic process, deadenylation-independent decay 6
                          deadenylation-independent decapping of nuclear-transcribed mRNA + 5
paths to the root