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ONTOLOGY REPORT - ANNOTATIONS

Term:striated muscle thin filament
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Accession:GO:0005865 term browser browse the term
Definition:Filaments formed of actin and associated proteins; attached to Z discs at either end of sarcomeres in myofibrils.


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striated muscle thin filament term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTA1 actin alpha 1, skeletal muscle located_in
is_active_in		 IDA
IBA		 (PMID:15198992) UniProt
GO_Central		 PMID:15198992 GO_REF:0000033 NCBI chr 1:229,431,245...229,434,094
Ensembl chr 1:229,430,365...229,434,104 		JBrowse link
G ACTL8 actin like 8 is_active_in IBA GO_Central GO_REF:0000033 NCBI chr 1:17,755,333...17,827,063
Ensembl chr 1:17,755,333...17,827,063 		JBrowse link
G FHOD3 formin homology 2 domain containing 3 located_in ISO PMID:19706596 MGI PMID:19706596 RGD:8554207 NCBI chr18:36,297,713...36,780,220
Ensembl chr18:36,297,713...36,780,220 		JBrowse link
G LMOD1 leiomodin 1 is_active_in IBA GO_Central GO_REF:0000033 NCBI chr 1:201,896,456...201,946,548
Ensembl chr 1:201,896,456...201,946,548 		JBrowse link
G LMOD2 leiomodin 2 is_active_in IBA GO_Central GO_REF:0000033 NCBI chr 7:123,655,866...123,664,290
Ensembl chr 7:123,655,866...123,664,290 		JBrowse link
G LMOD3 leiomodin 3 located_in
is_active_in		 IDA
IBA		 (PMID:25250574) UniProt
GO_Central		 PMID:25250574 GO_REF:0000033 NCBI chr 3:69,106,065...69,122,595
Ensembl chr 3:69,106,065...69,123,032 		JBrowse link
G NEB nebulin located_in NAS (PMID:10051637) UniProt PMID:10051637 NCBI chr 2:151,485,339...151,734,476
Ensembl chr 2:151,485,336...151,734,487 		JBrowse link
G TMOD1 tropomodulin 1 is_active_in
located_in		 IBA
IDA		 (PMID:25250574), (PMID:38168645) GO_Central
UniProt		 PMID:25250574 PMID:38168645 GO_REF:0000033 NCBI chr 9:97,501,180...97,601,743
Ensembl chr 9:97,501,180...97,601,743 		JBrowse link
G TMOD2 tropomodulin 2 is_active_in IBA GO_Central GO_REF:0000033 NCBI chr15:51,751,597...51,816,363
Ensembl chr15:51,751,597...51,816,363 		JBrowse link
G TMOD3 tropomodulin 3 located_in
is_active_in		 IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr15:51,829,653...51,915,725
Ensembl chr15:51,829,628...51,947,295 		JBrowse link
G TMOD4 tropomodulin 4 located_in
is_active_in		 IDA
IBA
IEA		 (PMID:25250574) UniProt
GO_Central
Ensembl		 PMID:25250574 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:151,169,987...151,175,981
Ensembl chr 1:151,169,986...151,176,284 		JBrowse link
G TNNT2 troponin T2, cardiac type located_in IDA (PMID:12186860) UniProt PMID:12186860 NCBI chr 1:201,359,014...201,377,680
Ensembl chr 1:201,359,008...201,377,764 		JBrowse link
G TTN titin located_in IDA (PMID:11717165) BHF-UCL PMID:11717165 NCBI chr 2:178,525,989...178,807,423
Ensembl chr 2:178,525,989...178,830,802 		JBrowse link
cardiac Troponin complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TNNC1 troponin C1, slow skeletal and cardiac type part_of IDA
IBA		 (PMID:25771144) CAFA
GO_Central		 PMID:25771144 GO_REF:0000033 NCBI chr 3:52,451,100...52,454,041
Ensembl chr 3:52,451,100...52,454,041 		JBrowse link
G TNNI3 troponin I3, cardiac type part_of IMP (PMID:25771144) CAFA PMID:25771144 NCBI chr19:55,151,767...55,157,732
Ensembl chr19:55,151,767...55,157,773 		JBrowse link
G TNNT2 troponin T2, cardiac type part_of IDA (PMID:25771144) CAFA PMID:25771144 NCBI chr 1:201,359,014...201,377,680
Ensembl chr 1:201,359,008...201,377,764 		JBrowse link
muscle thin filament tropomyosin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TPM1 tropomyosin 1 part_of TAS (PMID:8205619) PINC PMID:8205619 NCBI chr15:63,042,747...63,071,915
Ensembl chr15:63,042,620...63,071,915 		JBrowse link
G TPM2 tropomyosin 2 part_of TAS (PMID:7606936) PINC PMID:7606936 NCBI chr 9:35,681,993...35,690,056
Ensembl chr 9:35,681,992...35,690,056 		JBrowse link
G TPM3 tropomyosin 3 part_of TAS (PMID:3018581) UniProt PMID:3018581 NCBI chr 1:154,155,308...154,192,100
Ensembl chr 1:154,155,308...154,194,648 		JBrowse link
G TPM4 tropomyosin 4 part_of TAS (PMID:8641132) PINC PMID:8641132 NCBI chr19:16,067,538...16,103,002
Ensembl chr19:16,067,021...16,103,005 		JBrowse link
troponin complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PVALEF parvalbumin like EF-hand containing part_of IBA GO_Central GO_REF:0000033 NCBI chr17:81,165,507...81,183,166
Ensembl chr17:81,165,507...81,183,166 		JBrowse link
G TNNC1 troponin C1, slow skeletal and cardiac type part_of IDA (PMID:10850966), (PMID:12093807) UniProt PMID:10850966 PMID:12093807 NCBI chr 3:52,451,100...52,454,041
Ensembl chr 3:52,451,100...52,454,041 		JBrowse link
G TNNC2 troponin C2, fast skeletal type part_of IDA
IBA		 (PMID:17194691) UniProt
GO_Central		 PMID:17194691 GO_REF:0000033 NCBI chr20:45,823,214...45,833,306
Ensembl chr20:45,823,214...45,833,745 		JBrowse link
G TNNI1 troponin I1, slow skeletal type part_of ISO
IBA
IEA		 RGD
GO_Central
InterPro		 PMID:16192301 GO_REF:0000002 GO_REF:0000033 RGD:1599030 NCBI chr 1:201,403,784...201,421,730
Ensembl chr 1:201,403,784...201,429,866 		JBrowse link
G TNNI2 troponin I2, fast skeletal type part_of ISO
IBA
IEA
IDA		 (PMID:17194691) RGD
GO_Central
InterPro
UniProt
Ensembl		 PMID:16192301 PMID:17194691 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 RGD:1599030 NCBI chr11:1,838,981...1,841,678
Ensembl chr11:1,838,981...1,841,680 		JBrowse link
G TNNI3 troponin I3, cardiac type part_of IEA
IBA
IDA		 (PMID:10806205), (PMID:10850966), (PMID:12093807), (PMID:7957210) InterPro
GO_Central
UniProt		 PMID:7957210 PMID:10806205 PMID:10850966 PMID:12093807 GO_REF:0000002 GO_REF:0000033 NCBI chr19:55,151,767...55,157,732
Ensembl chr19:55,151,767...55,157,773 		JBrowse link
G TNNT1 troponin T1, slow skeletal type part_of ISO
IBA
IDA
IEA
IMP		 (PMID:18032382)
(PMID:15665378)		 RGD
GO_Central
UniProt
Ensembl
InterPro		 PMID:15665378 PMID:15788488 PMID:16192301 PMID:18032382 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 RGD:1599030 RGD:1599482 NCBI chr19:55,132,698...55,149,206
Ensembl chr19:55,132,698...55,149,206 		JBrowse link
G TNNT2 troponin T2, cardiac type part_of ISO
IBA
IEA
IDA		 (PMID:12093807), (PMID:12186860), (PMID:2530435) RGD
GO_Central
InterPro
UniProt		 PMID:2530435 PMID:12093807 PMID:12186860 PMID:12501194 GO_REF:0000002 GO_REF:0000033 RGD:1580426 NCBI chr 1:201,359,014...201,377,680
Ensembl chr 1:201,359,008...201,377,764 		JBrowse link
G TNNT3 troponin T3, fast skeletal type part_of ISO
IBA
IEA
IDA		 (PMID:17194691), (PMID:8987992), (PMID:9724539) RGD
GO_Central
InterPro
UniProt		 PMID:8987992 PMID:9724539 PMID:16192301 PMID:17194691 GO_REF:0000002 GO_REF:0000033 RGD:1599030 NCBI chr11:1,919,552...1,938,702
Ensembl chr11:1,919,703...1,938,706 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20802
    cellular anatomical structure 20465
      sarcomere 247
        striated muscle thin filament 25
          muscle thin filament tropomyosin 4
          troponin complex + 9
Path 2
Term Annotations click to browse term
  cellular_component 20802
    cellular anatomical structure 20465
      supramolecular complex 1553
        supramolecular polymer 1169
          supramolecular fiber 1161
            contractile muscle fiber 285
              myofibril 272
                sarcomere 247
                  striated muscle thin filament 25
                    muscle thin filament tropomyosin 4
                    troponin complex + 9
paths to the root