Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

ONTOLOGY REPORT - ANNOTATIONS

Term:troponin complex
go back to main search page
Accession:GO:0005861 term browser browse the term
Definition:A complex of accessory proteins (typically troponin T, troponin I and troponin C) found associated with actin in muscle thin filaments; involved in calcium regulation of muscle contraction.


show annotations for term's descendants           Sort by:
troponin complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tnnc1 troponin C1, slow skeletal and cardiac type part_of ISO (PMID:10850966), (PMID:12093807) RGD PMID:10850966 PMID:12093807 NCBI chr16:6,400,801...6,405,634
Ensembl chr16:6,402,171...6,405,634 		JBrowse link
G Tnnc2 troponin C2, fast skeletal type part_of ISO
IBA		 (PMID:17194691)
GO_REF:0000033		 RGD
GO_Central		 PMID:17194691 GO_REF:0000033 NCBI chr 3:153,513,272...153,516,033
Ensembl chr 3:153,513,271...153,516,029 		JBrowse link
G Tnni1 troponin I1, slow skeletal type part_of IDA
IBA
IEA		 GO_REF:0000033
GO_REF:0000002		 GO_Central
InterPro
RGD		 PMID:16192301 GO_REF:0000002 GO_REF:0000033, RGD:1599030 NCBI chr13:47,229,217...47,241,640
Ensembl chr13:47,229,216...47,241,644 		JBrowse link
G Tnni2 troponin I2, fast skeletal type part_of IDA
IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000002
GO_REF:0000107
(PMID:17194691)		 GO_Central
InterPro
Ensembl
RGD		 PMID:17194691 PMID:16192301 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107, RGD:1599030 NCBI chr 1:197,595,012...197,597,554
Ensembl chr 1:197,594,813...197,597,560 		JBrowse link
G Tnni3 troponin I3, cardiac type part_of TAS
IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000002
(PMID:10806205), (PMID:10850966), (PMID:12093807), (PMID:7957210)		 GO_Central
InterPro
RGD		 PMID:7957210 PMID:10806205 PMID:10850966 PMID:12093807 PMID:1886137 GO_REF:0000002 GO_REF:0000033, RGD:730167 NCBI chr 1:69,299,900...69,303,582
Ensembl chr 1:69,299,900...69,303,580 		JBrowse link
G Tnnt1 troponin T1, slow skeletal type part_of IDA
IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000002
(PMID:15665378), (PMID:18032382)		 GO_Central
InterPro
RGD		 PMID:15665378 PMID:18032382 PMID:16192301 PMID:15788488 GO_REF:0000002 GO_REF:0000033, RGD:1599030, RGD:1599482 NCBI chr 1:69,306,362...69,316,721
Ensembl chr 1:69,306,362...69,316,721 		JBrowse link
G Tnnt2 troponin T2, cardiac type part_of IDA
ISO
IBA
IEA		 (PMID:12832403)
GO_REF:0000033
(PMID:12093807), (PMID:2530435)
GO_REF:0000002
(PMID:12186860)		 RGD
GO_Central
InterPro		 PMID:2530435 PMID:12093807 PMID:12186860 PMID:12832403 PMID:12501194 GO_REF:0000002 GO_REF:0000033, RGD:1580426 NCBI chr13:47,267,325...47,285,390
Ensembl chr13:47,267,204...47,285,388 		JBrowse link
G Tnnt3 troponin T3, fast skeletal type part_of TAS
IBA
IEA
ISO
IDA		 GO_REF:0000033
GO_REF:0000002
GO_REF:0000107
(PMID:17194691), (PMID:8987992), (PMID:9724539)		 GO_Central
InterPro
Ensembl
RGD		 PMID:8987992 PMID:9724539 PMID:17194691 PMID:11940518 PMID:16192301 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107, RGD:1299083, RGD:1599030 NCBI chr 1:197,652,535...197,669,736
Ensembl chr 1:197,652,431...197,669,535 		JBrowse link
cardiac Troponin complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tnnc1 troponin C1, slow skeletal and cardiac type part_of ISO
IBA		 (PMID:25771144)
GO_REF:0000033		 RGD
GO_Central		 PMID:25771144 GO_REF:0000033 NCBI chr16:6,400,801...6,405,634
Ensembl chr16:6,402,171...6,405,634 		JBrowse link
G Tnni3 troponin I3, cardiac type part_of ISO (PMID:25771144) RGD PMID:25771144 NCBI chr 1:69,299,900...69,303,582
Ensembl chr 1:69,299,900...69,303,580 		JBrowse link
G Tnnt2 troponin T2, cardiac type part_of ISO
IEA		 (PMID:25771144)
GO_REF:0000107		 RGD
Ensembl		 PMID:25771144 GO_REF:0000107 NCBI chr13:47,267,325...47,285,390
Ensembl chr13:47,267,204...47,285,388 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20811
    protein-containing complex 6431
      troponin complex 8
        cardiac Troponin complex 3
Path 2
Term Annotations click to browse term
  cellular_component 20811
    cellular anatomical entity 20571
      organelle 13997
        non-membrane-bounded organelle 5255
          intracellular non-membrane-bounded organelle 5255
            contractile muscle fiber 264
              myofibril 250
                myofilament 21
                  striated muscle thin filament 18
                    troponin complex 8
                      cardiac Troponin complex 3
paths to the root