RGD DISEASE ONTOLOGY - ANNOTATIONS
RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.
Symbol
Object Name
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Erbb3
erb-b2 receptor tyrosine kinase 3
ISO
ClinVar Annotator: match by term: Visceral neuropathy, familial
ClinVar
PMID:25741868
NCBI chr 7:1,579,079...1,600,379
Ensembl chr 7:996,225...1,015,525
Symbol
Object Name
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Actg2
actin gamma 2, smooth muscle
ISO
ClinVar Annotator: match by term: Pseudoobstruction idiopathic intestinal | ClinVar Annotator: match by term: Visceral neuropathy, familial, autosomal dominant
ClinVar
PMID:11474115 PMID:21681106 PMID:22960657 PMID:23806086 PMID:24088041 PMID:24337657 PMID:24676022 PMID:24777424 PMID:25326635 PMID:25741868 PMID:25998219 PMID:26072522 PMID:26647307 PMID:26813947 PMID:26938784 PMID:27481187 PMID:28422808 PMID:29387497 PMID:29608093 PMID:29781137 PMID:31769566 PMID:32814715 PMID:33294969 More...
NCBI chr 4:117,579,513...117,604,379
Ensembl chr 4:116,021,832...116,046,465
G
Lmod1
leiomodin 1
ISO
ClinVar Annotator: match by term: Pseudoobstruction idiopathic intestinal
ClinVar
PMID:28292896
NCBI chr13:49,305,693...49,347,970
Ensembl chr13:46,754,033...46,794,900
G
Myh11
myosin heavy chain 11
ISO
ClinVar Annotator: match by term: Pseudoobstruction idiopathic intestinal
ClinVar
PMID:25407000
NCBI chr10:1,250,554...1,345,681
Ensembl chr10:743,685...838,459
G
Myl9
myosin light chain 9
ISO
ClinVar Annotator: match by term: Pseudoobstruction idiopathic intestinal
ClinVar
PMID:21293372 PMID:25741868 PMID:29453416 PMID:33031641
NCBI chr 3:165,742,020...165,748,409
Ensembl chr 3:145,281,937...145,288,333
G
Mylk
myosin light chain kinase
ISO
ClinVar Annotator: match by term: Pseudoobstruction idiopathic intestinal
ClinVar
PMID:28602422
NCBI chr11:79,288,243...79,535,450
Ensembl chr11:65,783,008...66,030,261
Symbol
Object Name
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Erbb2
erb-b2 receptor tyrosine kinase 2
ISO
ClinVar Annotator: match by term: Visceral neuropathy, familial, 2, autosomal recessive
OMIM ClinVar
PMID:25741868 PMID:28164408 PMID:28492532 PMID:29072371 PMID:33497358 PMID:34209587 More...
NCBI chr10:83,907,491...83,931,365
Ensembl chr10:83,411,313...83,435,078
Symbol
Object Name
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
Erbb3
erb-b2 receptor tyrosine kinase 3
ISO
ClinVar Annotator: match by term: Visceral neuropathy, familial, 1, autosomal recessive
ClinVar OMIM
PMID:25741868 PMID:33497358
NCBI chr 7:1,579,079...1,600,379
Ensembl chr 7:996,225...1,015,525
Term paths to the root one shortest all shortest one longest all longest one shortest and longest all