Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.
Term:ovarian small cell carcinoma
go back to main search page
Accession:DOID:6179 term browser browse the term
Definition:An ovarian carcinoma that is an undifferentiated neoplasm composed of primitive-appearing cells. (DO)
Synonyms:related_synonym: small cell carcinoma of the ovary, hypercalcemic type
 xref: EFO:1000431;   GARD:10411;   NCI:C27390
For additional species annotation, visit the Alliance of Genome Resources.


show annotations for term's descendants           Sort by:
ovarian small cell carcinoma term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 ISO ClinVar Annotator: match by term: Small cell carcinoma of the ovary, hypercalcemic type ClinVar PMID:25741868 PMID:26467025 PMID:28492532 NCBI chr 8:20,167,717...20,258,975
Ensembl chr 8:20,167,717...20,258,975 		JBrowse link
G Tp53 tumor protein p53 ISO ClinVar Annotator: match by term: Small cell carcinoma of the ovary, hypercalcemic type ClinVar NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  disease 18976
    disease of cellular proliferation 7746
      cancer 5576
        cell type cancer 3837
          carcinoma 3278
            ovarian carcinoma 103
              ovarian small cell carcinoma 2
                pulmonary type ovarian small cell carcinoma 0
                small-cell carcinoma of the ovary of hypercalcemic type 0
Path 2
Term Annotations click to browse term
  disease 18976
    disease of anatomical entity 18260
      Urogenital Diseases 5234
        Female Urogenital Diseases and Pregnancy Complications 2455
          Female Urogenital Diseases 2002
            female reproductive system disease 1999
              Adnexal Diseases 900
                ovarian disease 891
                  Ovarian Neoplasms 580
                    ovarian cancer 456
                      ovary epithelial cancer 127
                        malignant ovarian surface epithelial-stromal neoplasm 103
                          ovarian carcinoma 103
                            ovarian small cell carcinoma 2
                              pulmonary type ovarian small cell carcinoma 0
                              small-cell carcinoma of the ovary of hypercalcemic type 0
paths to the root