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Charcot-Marie-Tooth disease type 4K - Ontology Report - Rat Genome Database

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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.

Term:Charcot-Marie-Tooth disease type 4K
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Accession:DOID:0110187 term browser browse the term
Definition:A Charcot-Marie-Tooth disease type 4 that has_material_basis_in homozygous or compound heterozygous mutation in the SURF1 gene on chromosome 9q34. (DO)
Synonyms:exact_synonym: CHARCOT-MARIE-TOOTH DISEASE, DEMYELINATING, AUTOSOMAL RECESSIVE, TYPE 4K;   CHARCOT-MARIE-TOOTH NEUROPATHY, DEMYELINATING, AUTOSOMAL RECESSIVE, TYPE 4K;   CMT4K;   Charcot-Marie-Tooth disease, demyelinating, type 4K;   SURF1-related CMT4;   SURF1-related Charcot-Marie-Tooth disease type 4;   SURF1-related severe demyelinating Charcot-Marie-Tooth disease
 xref: MIM:616684;   MONDO:0014733;   ORDO:391351


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Charcot-Marie-Tooth disease type 4K term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B LOC100983451 surfeit locus protein 1 ISO ClinVar Annotator: match by term: CHARCOT-MARIE-TOOTH DISEASE, DEMYELINATING, TYPE 4K | ClinVar Annotator: match by term: Charcot-Marie-Tooth disease type 4K OMIM
ClinVar
PMID:10443880 PMID:12026244 PMID:12515039 PMID:12943968 PMID:16326995 More... NCBI chr 9:104,475,018...104,479,714
Ensembl chr 9:133,085,739...133,088,904
JBrowse link
G N LOC101710326 surfeit locus protein 1 ISO ClinVar Annotator: match by term: CHARCOT-MARIE-TOOTH DISEASE, DEMYELINATING, TYPE 4K | ClinVar Annotator: match by term: Charcot-Marie-Tooth disease type 4K OMIM
ClinVar
PMID:10443880 PMID:12026244 PMID:12515039 PMID:12943968 PMID:16326995 More... NCBI chrNW_004624760:1,815,215...1,819,014
Ensembl chrNW_004624760:1,815,224...1,818,991
JBrowse link
G S LOC101971854 surfeit locus protein 1 ISO ClinVar Annotator: match by term: CHARCOT-MARIE-TOOTH DISEASE, DEMYELINATING, TYPE 4K | ClinVar Annotator: match by term: Charcot-Marie-Tooth disease type 4K OMIM
ClinVar
PMID:10443880 PMID:12026244 PMID:12515039 PMID:12943968 PMID:16326995 More... NCBI chrNW_004936669:3,527,741...3,532,087
Ensembl chrNW_004936669:3,527,761...3,534,586
JBrowse link
G G LOC103239687 surfeit locus protein 1 ISO ClinVar Annotator: match by term: CHARCOT-MARIE-TOOTH DISEASE, DEMYELINATING, TYPE 4K | ClinVar Annotator: match by term: Charcot-Marie-Tooth disease type 4K OMIM
ClinVar
PMID:10443880 PMID:12026244 PMID:12515039 PMID:12943968 PMID:16326995 More... NCBI chr12:4,780,415...4,785,538
Ensembl chr12:4,780,568...4,785,385
JBrowse link
G P SURF1 SURF1 cytochrome c oxidase assembly factor ISO ClinVar Annotator: match by term: CHARCOT-MARIE-TOOTH DISEASE, DEMYELINATING, TYPE 4K | ClinVar Annotator: match by term: Charcot-Marie-Tooth disease type 4K OMIM
ClinVar
PMID:10443880 PMID:12026244 PMID:12515039 PMID:12943968 PMID:16326995 More... NCBI chr 1:272,965,637...272,970,516
Ensembl chr 1:272,965,643...272,970,483
JBrowse link
G D SURF1 SURF1 cytochrome c oxidase assembly factor ISO ClinVar Annotator: match by term: CHARCOT-MARIE-TOOTH DISEASE, DEMYELINATING, TYPE 4K | ClinVar Annotator: match by term: Charcot-Marie-Tooth disease type 4K OMIM
ClinVar
PMID:10443880 PMID:12026244 PMID:12515039 PMID:12943968 PMID:16326995 More... NCBI chr 9:49,786,562...49,790,004
Ensembl chr 9:49,786,085...49,790,148
JBrowse link
G C Surf1 surfeit 1 ISO ClinVar Annotator: match by term: CHARCOT-MARIE-TOOTH DISEASE, DEMYELINATING, TYPE 4K | ClinVar Annotator: match by term: Charcot-Marie-Tooth disease type 4K OMIM
ClinVar
PMID:10443880 PMID:12026244 PMID:12515039 PMID:12943968 PMID:16326995 More... NCBI chrNW_004955513:2,707,877...2,711,606
Ensembl chrNW_004955513:2,707,951...2,711,566
JBrowse link
G R Surf1 SURF1, cytochrome c oxidase assembly factor ISO ClinVar Annotator: match by term: CHARCOT-MARIE-TOOTH DISEASE, DEMYELINATING, TYPE 4K | ClinVar Annotator: match by term: Charcot-Marie-Tooth disease type 4K OMIM
ClinVar
PMID:10443880 PMID:12026244 PMID:12515039 PMID:12943968 PMID:16326995 More... NCBI chr 3:30,639,868...30,642,759
Ensembl chr 3:10,241,837...10,263,315
JBrowse link
G M Surf1 surfeit gene 1 ISO ClinVar Annotator: match by term: CHARCOT-MARIE-TOOTH DISEASE, DEMYELINATING, TYPE 4K | ClinVar Annotator: match by term: Charcot-Marie-Tooth disease type 4K OMIM
ClinVar
PMID:10443880 PMID:12026244 PMID:12515039 PMID:12943968 PMID:16326995 More... NCBI chr 2:26,803,390...26,806,667
Ensembl chr 2:26,803,393...26,806,542
JBrowse link
G H SURF1 SURF1 cytochrome c oxidase assembly factor IAGP ClinVar Annotator: match by term: Charcot-Marie-Tooth disease type 4K
ClinVar Annotator: match by term: CHARCOT-MARIE-TOOTH DISEASE, DEMYELINATING, TYPE 4K
ClinVar
OMIM
PMID:10443880 PMID:12026244 PMID:12515039 PMID:12943968 PMID:16326995 More... NCBI chr 9:133,351,758...133,356,487
Ensembl chr 9:133,351,758...133,356,676
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 288179
    disease of anatomical entity 271815
      musculoskeletal system disease 96321
        neuromuscular disease 33680
          Charcot-Marie-Tooth disease 7379
            Charcot-Marie-Tooth disease type 4 649
              Charcot-Marie-Tooth disease type 4K 10
Path 2
Term Annotations click to browse term
  disease 288179
    disease of anatomical entity 271815
      nervous system disease 190640
        central nervous system disease 157774
          neurodegenerative disease 56131
            Nervous System Heredodegenerative Disorders 34568
              motor peripheral neuropathy 13240
                Charcot-Marie-Tooth disease 7379
                  Charcot-Marie-Tooth disease type 4 649
                    Charcot-Marie-Tooth disease type 4K 10
paths to the root