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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.

Term:nasal type extranodal NK/T-cell lymphoma
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Accession:DOID:0080797 term browser browse the term
Definition:A mature T-cell and NK-cell lymphoma that is characterized by an often angiocentric and angiodestructive cellular infiltrate composed of EBV positive NK/T cells. (DO)
Synonyms:exact_synonym: Extranodal NK T Cell Lymphoma, Nasal;   Extranodal NK T Cell Lymphoma, Nasal and Nasal Type;   Extranodal NK-T-Cell Lymphomas;   extranodal NK-T-cell lymphoma
 primary_id: MESH:D054391
 xref: ICDO:9719/3;   MONDO:0019472;   NCI:C4684


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nasal type extranodal NK/T-cell lymphoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb1 ATP binding cassette subfamily B member 1 severity ISO Nasal Type;protein:increased expression:nasal cavity (human) RGD PMID:18756548 RGD:8657087 NCBI chrNW_004955432:4,911,774...5,085,349 JBrowse link
G Cd274 CD274 molecule disease_progression ISO associated with Epstein-Barr Virus Infections RGD PMID:27595782 RGD:41412182 NCBI chrNW_004955434:9,487,309...9,508,366
Ensembl chrNW_004955434:9,487,315...9,505,904
JBrowse link
G Cflar CASP8 and FADD like apoptosis regulator ISO CTD Direct Evidence: marker/mechanism CTD PMID:15924153 NCBI chrNW_004955403:415,092...442,214
Ensembl chrNW_004955403:412,632...434,741
JBrowse link
G Fas Fas cell surface death receptor ISO DNA:insertion, deletions:cds:multiple (human) RGD PMID:12466128 RGD:8662407 NCBI chrNW_004955425:3,961,671...3,987,513
Ensembl chrNW_004955425:3,961,013...3,987,455
JBrowse link
G Gpx3 glutathione peroxidase 3 treatment ISO associated with ethmoid sinus cancer and Neoplasm Metastasis RGD PMID:29496492 RGD:151708712 NCBI chrNW_004955408:2,622,162...2,629,088
Ensembl chrNW_004955408:2,622,741...2,629,032
JBrowse link
G Jak3 Janus kinase 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:22705984 PMID:23689514 NCBI chrNW_004955524:3,399,895...3,412,018
Ensembl chrNW_004955524:3,401,642...3,411,643
JBrowse link
G Prdm1 PR/SET domain 1 disease_progression ISO RGD PMID:24438193 RGD:150530467 NCBI chrNW_004955411:31,434,503...31,455,995
Ensembl chrNW_004955411:31,434,503...31,456,056
JBrowse link
G Stat3 signal transducer and activator of transcription 3 ISO protein:increased expression:nasal cavity (human) RGD PMID:17225522 RGD:153298933 NCBI chrNW_004955451:16,320,326...16,348,505
Ensembl chrNW_004955451:16,319,904...16,357,687
JBrowse link
G Stat5b signal transducer and activator of transcription 5B ISO CTD Direct Evidence: marker/mechanism CTD PMID:29200404 NCBI chrNW_004955451:16,253,645...16,295,337
Ensembl chrNW_004955451:16,255,398...16,272,214
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 14320
    disease of cellular proliferation 6919
      Neoplasms by Histologic Type 4777
        lymphoma 501
          non-Hodgkin lymphoma 423
            T-cell non-Hodgkin lymphoma 156
              nasal type extranodal NK/T-cell lymphoma 9
Path 2
Term Annotations click to browse term
  disease 14320
    disease of anatomical entity 14026
      nervous system disease 12344
        Neurologic Manifestations 9199
          sensory system disease 6525
            Otorhinolaryngologic Diseases 1623
              nose disease 197
                paranasal sinus disease 53
                  Paranasal Sinus Neoplasms 18
                    Sinonasal Neoplasms 15
                      nasal cavity cancer 15
                        nasal type extranodal NK/T-cell lymphoma 9
paths to the root