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glutaryl-CoA - Ontology Report - Rat Genome Database

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CHEBI ONTOLOGY - ANNOTATIONS

The Chemical Entities of Biological Interest (ChEBI) ontology is downloaded weekly from EMBL-EBI at http://www.ebi.ac.uk/chebi/. The data is made available under the Creative Commons License (CC BY 3.0, http://creativecommons.org/licenses/by/3.0/). For more information see: Degtyarenko et al. (2008) ChEBI: a database and ontology for chemical entities of biological interest. Nucleic Acids Res. 36, D344–D350.
Term:glutaryl-CoA
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Accession:CHEBI:15524 term browser browse the term
Definition:An omega-carboxyacyl-CoA that results from the formal condensation of the thiol group of coenzyme A with one of the carboxy groups of glutaric acid.
Synonyms:exact_synonym: 3'-phosphoadenosine 5'-{3-[(3R)-4-{[3-({2-[(4-carboxybutanoyl)sulfanyl]ethyl}amino)-3-oxopropyl]amino}-3-hydroxy-2,2-dimethyl-4-oxobutyl] dihydrogen diphosphate}
 related_synonym: 4-carboxybutanoyl-CoA;   4-carboxybutanoyl-coenzyme A;   Formula=C26H42N7O19P3S;   InChI=1S/C26H42N7O19P3S/c1-26(2,21(39)24(40)29-7-6-15(34)28-8-9-56-17(37)5-3-4-16(35)36)11-49-55(46,47)52-54(44,45)48-10-14-20(51-53(41,42)43)19(38)25(50-14)33-13-32-18-22(27)30-12-31-23(18)33/h12-14,19-21,25,38-39H,3-11H2,1-2H3,(H,28,34)(H,29,40)(H,35,36)(H,44,45)(H,46,47)(H2,27,30,31)(H2,41,42,43)/t14-,19-,20-,21+,25-/m1/s1;   InChIKey=SYKWLIJQEHRDNH-CKRMAKSASA-N;   SMILES=CC(C)(COP(O)(=O)OP(O)(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1OP(O)(O)=O)n1cnc2c(N)ncnc12)[C@@H](O)C(=O)NCCC(=O)NCCSC(=O)CCCC(O)=O;   coenzyme A, S-(hydrogen pentanedioate);   glutaryl-coenzyme A
 alt_id: CHEBI:14326;   CHEBI:24332;   CHEBI:5436
 xref: CAS:3131-84-8;   HMDB:HMDB0001339;   KEGG:C00527
 xref_mesh: MESH:C015901
 xref: PDBeChem:GRA;   PMID:11024031;   PMID:3971969;   PMID:6547838;   PMID:853337;   PMID:8722121;   UM-BBD_compID:c0222
 cyclic_relationship: is_conjugate_acid_of CHEBI:57378

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glutaryl-CoA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acot4 acyl-CoA thioesterase 4 affects hydrolysis ISO ACOT4 protein affects the hydrolysis of glutaryl-coenzyme A CTD PMID:16141203 NCBI chr 6:103,668,699...103,674,037
Ensembl chr 6:103,668,753...103,673,917 		JBrowse link
G Acot8 acyl-CoA thioesterase 8 affects hydrolysis ISO ACOT8 protein affects the hydrolysis of glutaryl-coenzyme A CTD PMID:16141203 NCBI chr 3:153,531,192...153,542,851
Ensembl chr 3:153,531,193...153,542,851 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 20845
    role 20805
      biological role 20803
        biochemical role 20250
          cofactor 16899
            coenzyme 1030
              coenzyme A 29
                glutaryl-CoA 2
                  2-hydroxyglutaryl-CoA + 0
                  3-hydroxy-3-methylglutaryl-CoA + 0
Path 2
Term Annotations click to browse term
  CHEBI ontology 20845
    subatomic particle 20843
      composite particle 20843
        hadron 20843
          baryon 20843
            nucleon 20843
              atomic nucleus 20843
                atom 20843
                  main group element atom 20766
                    p-block element atom 20766
                      chalcogen 20477
                        oxygen atom 20443
                          oxygen molecular entity 20443
                            hydroxides 20216
                              oxoacid 19271
                                pnictogen oxoacid 15099
                                  phosphorus oxoacid 14652
                                    phosphoric acids 13973
                                      phosphoric acid 13973
                                        phosphoric acid derivative 13885
                                          phosphate 13884
                                            organic phosphate 13884
                                              carbohydrate phosphate 1974
                                                phospho sugar 1817
                                                  aldose phosphate 1814
                                                    aldopentose phosphate 1806
                                                      ribose phosphate 1801
                                                        ribonucleotide 1761
                                                          purine ribonucleotide 1719
                                                            adenyl ribonucleotide 1310
                                                              adenosine phosphate 297
                                                                adenosine 5'-phosphate 296
                                                                  ADP 90
                                                                    3'-phosphate-adenosine-5'-diphosphate 29
                                                                      coenzyme A 29
                                                                        acyl-CoA 29
                                                                          omega-carboxyacyl-CoA 2
                                                                            glutaryl-CoAs 2
                                                                              glutaryl-CoA 2
                                                                                2-hydroxyglutaryl-CoA + 0
                                                                                3-hydroxy-3-methylglutaryl-CoA + 0
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