Hrsq3_m QTL Report (Mus musculus) - Rat Genome Database

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QTL Registration

QTL: Hrsq3_m (host response to SARS QTL 3, eosinophilia (mouse)) Mus musculus

Symbol: Hrsq3_m
Name: host response to SARS QTL 3, eosinophilia (mouse)
RGD ID: 25671381
LOD Score: Not Available
P Value: Not Available
Variance: Not Available
Position
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm391572,144,539 - 75,844,833MOUSEQTLGRCm39
GRCm381572,272,690 - 75,972,984MOUSEQTLGRCm38
cM Map15syntenicMOUSEQTL
Cross Type: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



References

References - curated
# Reference Title Reference Citation
1. Mouse Genome Database (MGD) Mouse Genome Database (MGD)
Additional References at PubMed
PMID:26452100  


Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
401703411LOC131387709STARR-seq mESC enhancer starr_38927157215994472161430Mouse
401712594LOC131387710STARR-seq mESC enhancer starr_38928157219907172200715Mouse
401709292LOC131387711STARR-seq mESC enhancer starr_38929157220364372204755Mouse
401706553LOC131387712STARR-seq mESC enhancer starr_38930157220722572208815Mouse
401704052LOC131387713STARR-seq mESC enhancer starr_38931157234785272349593Mouse
401710727LOC131387714STARR-seq mESC enhancer starr_38932157235575272356777Mouse
15019188Gm52221predicted gene, 52221157236272572362792Mouse
15002793Gm24390predicted gene, 24390157236280772362868Mouse
1623809Kcnk9potassium channel, subfamily K, member 9157237372272422415Mouse
401837598LOC132443644STARR-positive B cell enhancer ABC_E8594157244045872440759Mouse
401703044LOC131387715STARR-seq mESC enhancer starr_38933157245881372460659Mouse
1319814Trappc9trafficking protein particle complex 9157246146972933086Mouse
401710033LOC131387716STARR-seq mESC enhancer starr_38934157246888872469712Mouse
15002939Gm28020predicted gene, 28020157259317072593236Mouse
39128582Gm53896predicted gene, 53896157267500372691891Mouse
1615533Peg13paternally expressed 13157267745172682173Mouse
10017234Gm41343predicted gene, 41343157270362172720683Mouse
39128366Gm53258predicted gene, 53258157272529272775383Mouse
401836360LOC132443645STARR-positive B cell enhancer ABC_E10860157273668572736985Mouse
163658116LOC128927367CapStarr-seq enhancer MGSCv37_chr15:72695941-72696136157273736072737683Mouse
401702689LOC131387717STARR-seq mESC enhancer starr_38939157278436372786247Mouse
2299366Gm3150predicted gene 3150157278515772785636Mouse
163660045LOC128927368CapStarr-seq enhancer MGSCv37_chr15:72759279-72759495157280069872800914Mouse
401713154LOC131387718STARR-seq mESC enhancer starr_38940157282759772830187Mouse
9607115Gm31665predicted gene, 31665157284361772850777Mouse
401709878LOC131387719STARR-seq mESC enhancer starr_38942157287645572879019Mouse
39129745LOC114827955VISTA enhancer mm1679157289226872895168Mouse
401834310LOC132443646STARR-positive B cell enhancer ABC_E1908157293287172933172Mouse
401833055LOC132443647STARR-positive B cell enhancer ABC_E1479157293936372939664Mouse
401836533LOC132443648STARR-positive B cell enhancer ABC_E7378157294065772940958Mouse
401716241LOC131387720STARR-seq mESC enhancer starr_38946157296155072963051Mouse
1623874Chrac1chromatin accessibility complex 1157296226172965924Mouse
732768Ago2argonaute RISC catalytic subunit 2157296769373056777Mouse
9647633Gm31725predicted gene, 31725157298032272987334Mouse
401837185LOC132443649STARR-positive B cell enhancer ABC_E8595157301205773012358Mouse
401840973LOC132443650STARR-positive B cell enhancer ABC_E7379157303373873034039Mouse
401840920LOC132443651STARR-positive B cell enhancer ABC_E10861157304175473042054Mouse
401836608LOC132443652STARR-positive B cell enhancer ABC_E7380157305681973057120Mouse
163692379LOC128927369CapStarr-seq enhancer MGSCv37_chr15:73017364-73017547157305878373058966Mouse
401704780LOC131387721STARR-seq mESC enhancer starr_38954157306354973068435Mouse
732758Ptk2PTK2 protein tyrosine kinase 2157307695173297192Mouse
401711018LOC131387722STARR-seq mESC enhancer starr_38957157311786073119439Mouse
1608322Mir151microRNA 151157312666473126731Mouse
10017653Gm41344predicted gene, 41344157317640973196969Mouse
14997707Gm24787predicted gene, 24787157322164873221770Mouse
401701450LOC131387723STARR-seq mESC enhancer starr_38959157326474873266191Mouse
2294920Gm7908predicted gene 7908157327934173280087Mouse
401838246LOC132443653STARR-positive B cell enhancer mm9_chr15:73254258-73254558157329567773295977Mouse
2294387Gm10362predicted gene 10362157330017273300773Mouse
401701472LOC131387724STARR-seq mESC enhancer starr_38960157331821673319729Mouse
401711769LOC131387725STARR-seq mESC enhancer starr_38961157334176173343357Mouse
401838834LOC132443654STARR-positive B cell enhancer ABC_E7381157336415573364456Mouse
5139726Gm19811predicted gene, 19811157336888773369146Mouse
401838948LOC132443655STARR-positive B cell enhancer mm9_chr15:73342795-73343096157338421473384515Mouse
1619909Dennd3DENN domain containing 3157338433373444091Mouse
401707350LOC131387726STARR-seq mESC enhancer starr_38965157344098173443303Mouse
1320603Slc45a4solute carrier family 45, member 4157344926773517606Mouse
401834781LOC132443656STARR-positive B cell enhancer mm9_chr15:73476060-73476361157351747973517780Mouse
401709676LOC131387727STARR-seq mESC enhancer starr_38967157352384073525628Mouse
401707632LOC131387728STARR-seq mESC enhancer starr_38972157354616973549502Mouse
733772Gpr20G protein-coupled receptor 20157356034673579354Mouse
401834172LOC132443657STARR-positive B cell enhancer mm9_chr15:73548453-73548754157358987273590173Mouse
1318605Ptp4a3protein tyrosine phosphatase 4a3157359499173629075Mouse
14997065Gm22106predicted gene, 22106157360101373601139Mouse
163692808LOC128927370CapStarr-seq enhancer MGSCv37_chr15:73562951-73563152157360437073604571Mouse
163657385LOC128927371CapStarr-seq enhancer MGSCv37_chr15:73565412-73565613157360683173607032Mouse
401706390LOC131387729STARR-seq mESC enhancer starr_38975157361982273622181Mouse
1615592Mroh5maestro heat-like repeat family member 5157365878573711520Mouse
2306351Ndufb4cNADH:ubiquinone oxidoreductase subunit B4C157368129173681783Mouse
1613847Gm6569predicted gene 6569157370192273711757Mouse
15023430Gm52173predicted gene, 52173157377556373779948Mouse
401703710LOC131387730STARR-seq mESC enhancer starr_38977157385745373858818Mouse
9605729Gm32355predicted gene, 32355157386454173865897Mouse
9661750Gm32405predicted gene, 32405157386595173871859Mouse
401704566LOC131387731STARR-seq mESC enhancer starr_38978157389678873898730Mouse
401717149LOC131387732STARR-seq mESC enhancer starr_38979157393514473936368Mouse
1619424Gm7935predicted pseudogene 7935157395185573953404Mouse
2294089Gm15387predicted gene 15387157396500373966322Mouse
39129508LOC110120551VISTA enhancer mm1584157402731674030303Mouse
9632927Gm32918predicted gene, 32918157406706274076298Mouse
5139456Gm19859predicted gene, 19859157410643774157246Mouse
401709553LOC131387733STARR-seq mESC enhancer starr_38981157414005874143161Mouse
9607605Gm32839predicted gene, 32839157415741774165328Mouse
9619526Gm32168predicted gene, 32168157428497174359495Mouse
1313738Adgrb1adhesion G protein-coupled receptor B1157438804574461314Mouse
401704069LOC131387734STARR-seq mESC enhancer starr_38984157440671674409248Mouse
401714647LOC131387735STARR-seq mESC enhancer starr_38985157446004874461910Mouse
1323741Mroh4maestro heat-like repeat family member 4157447787574508653Mouse
401712872LOC131387736STARR-seq mESC enhancer starr_38988157452381374525506Mouse
401710140LOC131387737STARR-seq mESC enhancer starr_38991157453677574540030Mouse
62329Arcactivity regulated cytoskeletal-associated protein157454093074544419Mouse
9594186Gm32994predicted gene, 32994157454460974576357Mouse
401709425LOC131387738STARR-seq mESC enhancer starr_38994157456254374565627Mouse
1314868Jrkjerky157457426174581171Mouse
23157204933427E11RikRIKEN cDNA 4933427E11 gene157458101074582223Mouse
1321186Pscaprostate stem cell antigen157458668874588914Mouse
1623808Them6thioesterase superfamily member 6157459308374596222Mouse
163672132LOC128927372CapStarr-seq enhancer MGSCv37_chr15:74553786-74554003157459520574595422Mouse
1551559Slurp1secreted Ly6/Plaur domain containing 1157459849374599872Mouse
1557472Lypd2Ly6/Plaur domain containing 2157460409574606644Mouse
9599018Gm33124predicted gene, 33124157460673074610280Mouse
1317833Slurp2secreted Ly6/Plaur domain containing 2157461468874618536Mouse
1323781Lynx1Ly6/neurotoxin 1157461970574624828Mouse
1314572Ly6dlymphocyte antigen 6 family member D157463390574635416Mouse
163666846LOC128927373CapStarr-seq enhancer MGSCv37_chr15:74599639-74599822157464105874641241Mouse
1618268Ly6g6glymphocyte antigen 6 family member G6G157464275774656694Mouse
401707661LOC131387739STARR-seq mESC enhancer starr_38995157465506874657008Mouse
9678378Gm33174predicted gene, 33174157465730174660628Mouse
1550824Ly6klymphocyte antigen 6 family member K157466872374671817Mouse
1621804Gmlglycosylphosphatidylinositol anchored molecule like157468528374691898Mouse
1616864Gml2glycosylphosphatidylinositol anchored molecule like 2157469079174717997Mouse
401702995LOC131387740STARR-seq mESC enhancer starr_38997157469651574699167Mouse
10428Cyp11b1cytochrome P450, family 11, subfamily b, polypeptide 1157470674174713492Mouse
10430Cyp11b2cytochrome P450, family 11, subfamily b, polypeptide 2157472246774728080Mouse
10015429Gm41347predicted gene, 41347157472705074745245Mouse
39128909LOC110673973Cyp11b2 promoter157472808674728514Mouse
401703677LOC131387741STARR-seq mESC enhancer starr_38998157474055874741631Mouse
1618379Ly6mlymphocyte antigen 6 family member M157475018574753553Mouse
163710260LOC128927374CapStarr-seq enhancer MGSCv37_chr15:74736563-74736853157477798274778398Mouse
2309621Gm6610predicted gene 6610157479328374797754Mouse
10021207Gm39556predicted gene, 39556157479833374807291Mouse
401835441LOC132443658STARR-positive B cell enhancer ABC_E1173157480568474805985Mouse
401700541LOC131387742STARR-seq mESC enhancer starr_39002157481938474824209Mouse
1556880Ly6elymphocyte antigen 6 family member E157482687474831753Mouse
401838473LOC132443659STARR-positive B cell enhancer ABC_E7383157483444174834742Mouse
9669039Gm28068predicted gene 28068157483878074915734Mouse
1624023Ly6ilymphocyte antigen 6 family member I157485138374855279Mouse
2294726Gm8000predicted gene 8000157485817674860931Mouse
401832510LOC132443660STARR-positive B cell enhancer ABC_E10863157486093974861239Mouse
10039160Gm41348predicted gene, 41348157486383874865788Mouse
1316843Ly6alymphocyte antigen 6 family member A157486672674869880Mouse
401710178LOC131387743STARR-seq mESC enhancer starr_39006157487421374877722Mouse
401833391LOC132443661STARR-positive B cell enhancer ABC_E8596157489290874893209Mouse
401709749LOC131387744STARR-seq mESC enhancer starr_39007157490246474905338Mouse
1623306Ly6c1lymphocyte antigen 6 family member C1157491586774920690Mouse
2309443Gm5960predicted gene 5960157493397674946564Mouse
401716175LOC131387745STARR-seq mESC enhancer starr_39009157495747774959536Mouse
401840164LOC132443662STARR-positive B cell enhancer ABC_E11591157496139774961697Mouse
1625911Ly6c2lymphocyte antigen 6 family memberC2157498001074983820Mouse
1618674Ly6a2lymphocyte antigen 6 family member A2157500314175006977Mouse
1613200Ly6glymphocyte antigen 6 family member G157502711075030977Mouse
11576888Gm28117predicted gene 28117157506573675069516Mouse
1623807Ly6g2lymphocyte antigen 6 family member G2157508822775094510Mouse
2311849Gm10238predicted pseudogene 10238157510713975110617Mouse
1623305Ly6flymphocyte antigen 6 family member F157514022175144086Mouse
15019003Gm52218predicted gene, 52218157515049475159088Mouse
401704166LOC131387746STARR-seq mESC enhancer starr_39012157515349475154857Mouse
2310970Gm3454predicted gene 3454157518317375186813Mouse
9629051Gm28114predicted gene 28114157522046675264729Mouse
401705770LOC131387747STARR-seq mESC enhancer starr_39013157522054975222113Mouse
401704609LOC131387748STARR-seq mESC enhancer starr_39014157523579775237709Mouse
401708097LOC131387749STARR-seq mESC enhancer starr_39015157524278475244526Mouse
16199059030619P08RikRIKEN cDNA 9030619P08 gene157529945575303678Mouse
9623411Ly6llymphocyte antigen 6 family member L157532130175323662Mouse
9613447Gm34531predicted gene, 34531157534195575351942Mouse
9670814Gm34593predicted gene, 34593157537059775376195Mouse
9635703Gm34646predicted gene, 34646157538911175391506Mouse
1323594Ly6hlymphocyte antigen 6 family member H157543659475439114Mouse
1557418Gpihbp1GPI-anchored HDL-binding protein 1157546847975470062Mouse
1331965Zfp41zinc finger protein 41157548697275501676Mouse
401836323LOC132443663STARR-positive B cell enhancer ABC_E1174157548817375488474Mouse
12794782Gm46519predicted gene, 46519157550381475506226Mouse
401707215LOC131387750STARR-seq mESC enhancer starr_39016157550495175506597Mouse
10005512Gm38506predicted gene, 38506157550650575512265Mouse
16080692810039B14RikRIKEN cDNA 2810039B14 gene157551323275519286Mouse
39129115LOC109280133VISTA enhancer mm1304157551855875521557Mouse
1331949Top1mtDNA topoisomerase 1, mitochondrial157552887875551184Mouse
401839368LOC132443664STARR-positive B cell enhancer ABC_E4136157555114475551445Mouse
1313864Rhpn1rhophilin, Rho GTPase binding protein 1157557609775586268Mouse
1557163MafaMAF bZIP transcription factor A157561735075620170Mouse
401842138LOC132443665STARR-positive B cell enhancer ABC_E10864157562011475620414Mouse
1623806Zc3h3zinc finger CCCH type containing 3157562627975713772Mouse
14996252Gm23747predicted gene, 23747157563170875631838Mouse
401841886LOC132443666STARR-positive B cell enhancer ABC_E1911157571373075714031Mouse
401714432LOC131387751STARR-seq mESC enhancer starr_39021157571532575719603Mouse
9642680Gm34851predicted gene, 34851157571535475717019Mouse
39128852Gm53897predicted gene, 53897157571781575721028Mouse
2301298Gm9568predicted gene 9568157572646775728095Mouse
1332101Gsdmdgasdermin D157573399075739257Mouse
401710195LOC131387752STARR-seq mESC enhancer starr_39025157574672875748982Mouse
5140973Mroh6maestro heat-like repeat family member 6157575308575762544Mouse
1558072Naprtnicotinate phosphoribosyltransferase157576281275766330Mouse
1323466Eef1deukaryotic translation elongation factor 1 delta157576664375781425Mouse
1553778Tigd5tigger transposable element derived 5157578158475786384Mouse
1319274Pycr3pyrroline-5-carboxylate reductase 3157578831975793369Mouse
1315980GfusGDP-L-fucose synthase157579653275801613Mouse
1557121Zfp623zinc finger protein 623157581279875821251Mouse
401714133LOC131387753STARR-seq mESC enhancer starr_39034157582851575831267Mouse
39129229Gm53898predicted gene, 53898157583023175836882Mouse
1616818Eif2s3x-ps1eukaryotic translation initiation factor 2, subunit 3, pseudogene 1157583879575840414Mouse
1331915Zfp707zinc finger protein 707157584097275847717Mouse

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch

QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4141952W3q7_mweight 3 weeks QTL 7 (mouse)Not determined348969478601286Mouse
4142252Tailaq4_mtail length adjusted QTL 4 (mouse)Not determined348969478601286Mouse
4142448Tailq6_mtail length QTL 6 (mouse)Not determined348969478601286Mouse
1357559Scfq2_msubcutaneous fat pad weight QTL 2 (mouse)Not determined15348969478601286Mouse
1357659Epfpq4_mepididymal fat percentage QTL 4 (mouse)Not determined15348969478601286Mouse
26884417Bzwq4_mbi-zygomatic width QTL 4, 5 week (mouse)15612948172471849Mouse
27226786Feml11_mfemur length 11, 5 week (mouse)15612948175871849Mouse
27095932Ulnl11_mulna length 11, 16 week (mouse)15612948176384200Mouse
27226717Tibw4_mtibia width 4, proximal, 10 week (mouse)15612948178684200Mouse
27226734Tibmd5_mtibia midshaft diameter 5, 10 week (mouse)15612948186684201Mouse
26884442Sklq6_mskull length QTL 6, 5 week (mouse)156129481100797881Mouse
27226721Tibw8_mtibia width 8, proximal, 16 week (mouse)15692948175871849Mouse
27226773Tibl16_mtibia length 16, 10 week (mouse)15692948175871849Mouse
27226777Tibl8_mtibia length 8, 5 week (mouse)15692948184584201Mouse
1301433Rapop5_mradiation-induced apoptosis 5 (mouse)Not determined15927302279474762Mouse
1357526Hyplip2_mhyperlipidemia 2 (mouse)Not determined1512402203102896555Mouse
26884425Cvht2_mcranial vault height 2, 5 week (mouse)1528800146102008435Mouse
26884392Humsd8_mhumerus midshaft diameter 8, 16 week (mouse)152930014676084200Mouse
1558985Eae32_mexperimental allergic encephalomyelitis susceptibility 32 (mouse)Not determined1532578416103425899Mouse
27226729Tibmd2_mtibia midshaft diameter 2, 5 week (mouse)153800024486684201Mouse
1301580Hrq2_mheart rate quantitative locus 2 (mouse)Not determined153910039573100593Mouse
4142459Lfnq3_mlung function QTL 3 (mouse)Not determined4017702272372580Mouse
26884402Cvht9_mcranial vault height 9, 16 week (mouse)154216339695497881Mouse
1357703Vtbt17_mvertebral trabecular bone trait 17 (mouse)Not determined154455331378553437Mouse
1301568Tria2_mT-cell receptor induced activation 2 (mouse)Not determined154485914178859281Mouse
1357756Alaa4_malopecia areata 4 (mouse)Not determined154638964680389845Mouse
10755515Amzn3_manatomical modifier of Zfp423 3 (mouse)154638964680389845Mouse
1301006Hfib1_mhepatic fibrogenesis 1 (mouse)Not determined154730633481306479Mouse
1301860Gct3_mgranulosa cell tumorigenesis 3 (mouse)Not determined154740959681409691Mouse
26884397Humsd5_mhumerus midshaft diameter 5, 10 week (mouse)154836339698397881Mouse
26884399Humsd1_mhumerus midshaft diameter 1, 5 week (mouse)1548363396101708435Mouse
1301429Pcir3_mperiosteal circumference 3 (mouse)Not determined154846536282465496Mouse
1301779Dpml_mdopamine loss (mouse)Not determined155100469476794493Mouse
4142198Hbtq_mhabituation QTL (mouse)Not determined155116070885160833Mouse
10045637Heal27_mwound healing/regeneration 29 (mouse)Not determined155141836185418511Mouse
10412067Pain2_mpain 2 (mouse)Not determined155164533985645626Mouse
1302080Szs13_mseizure susceptibility 13 (mouse)Not determined155168583285694449Mouse
1301708Cocrb14_mcocaine related behavior 14 (mouse)Not determined155180651585806651Mouse
38501067Tip3_mtuberculosis immunophenotype 3, IFN-g level (mouse)155356339689584203Mouse
13504731Cath5_mcarotid atherosclerosis 5 (mouse)155478912988789129Mouse
1302074Bmd4_mbone mineral density 4 (mouse)Not determined1556186708103425899Mouse
27095936Ulnl4_mulna length 4, 5 week (mouse)155676339687684201Mouse
1300800Ses3_msalmonella enteritidis susceptibility 3 (mouse)Not determined155711700591117153Mouse
1357407Pfat4_mpredicted fat percentage 4 (mouse)8.6Body fat amountpredicted fat percentage155711700591117153Mouse
12880420V25Dq8_mvitamin D inactive form serum level QTL 8 (mouse)156158420095584200Mouse
1301601Faq9_mfluctuating asymmetry QTL 9 (mouse)Not determined156316390397163995Mouse
1558786Msq1_mMAV-1 susceptibility QTL 1 (mouse)Not determined156338964681086436Mouse
1302197Bhr2_mbronchial hyperresponsiveness 2 (mouse)Not determined1564306334103425899Mouse
4141135Cia35_mcollagen induced arthritis 35 (mouse)Not determined156481182698811946Mouse
1301119Drb7_mdopamine receptor binding 7 (mouse)Not determined156533657899341028Mouse
1301171Brm2_mbrachyury modifier 2 (mouse)Not determined156552537699525499Mouse
4141921Pstc3_mperiosteal circumference 3 (mouse)Not determined1567270698101270847Mouse
1300627Sluc26_msusceptibility to lung cancer 26 (mouse)Not determined1570345653104073951Mouse
1300648Dbsty4_mdiabesity 4 (mouse)Not determined1570349271104073951Mouse
1300726Pitm4_mprion incubation time 4 (mouse)Not determined1570349271104073951Mouse
13801031Hwtf1_mheart weight by femur 1 (mouse)157167184972871849Mouse
25671381Hrsq3_mhost response to SARS QTL 3, eosinophilia (mouse)157214453975844833Mouse
1300844Emo2_memotionality 2 (mouse)Not determined157237245976794493Mouse
1302002Cocia2_mcocaine induced activation 2 (mouse)Not determined157237245979899178Mouse
14747011Mancz13_mmandible centroid size 13 (mouse)1572382669104073951Mouse
12791003Aath8_maortic arch atherosclerosis 8 (mouse)1573430144104073951Mouse
15092079Igly6_mIgG glycosylation 6, GP6 (mouse)157410054082674156Mouse
13442492Mecth2_mmechanosensation threshold 2 (mouse)157466284979387201Mouse
1301472Pain1_mpain 1 (mouse)Not determined157532084690813185Mouse


Additional Information

Database Acc Id Source(s)
MGD MGI:6403753 MouseQtl