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ONTOLOGY REPORT - ANNOTATIONS

Term:regulation of developmental pigmentation
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Accession:GO:0048070 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of the developmental process that results in the deposition of coloring matter in an organism.
Synonyms:exact_synonym: regulation of pigmentation during development

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regulation of developmental pigmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adamts20 ADAM metallopeptidase with thrombospondin type 1 motif 20 acts_upstream_of_or_within ISO (PMID:14138974)
(PMID:18454205)		 MGI PMID:14138974 PMID:18454205 NCBI chrNW_004955500:2,688,281...2,850,667
Ensembl chrNW_004955500:2,689,717...2,850,667 		JBrowse link
G Adamts9 ADAM metallopeptidase with thrombospondin type 1 motif 9 acts_upstream_of_or_within ISO (PMID:18454205) MGI PMID:18454205 NCBI chrNW_004955517:1,302,560...1,443,708
Ensembl chrNW_004955517:1,302,922...1,440,245 		JBrowse link
G Bcl2 BCL2 apoptosis regulator acts_upstream_of_or_within ISO (PMID:15818405) MGI PMID:15818405 NCBI chrNW_004955402:46,911,125...47,084,214
Ensembl chrNW_004955402:46,916,266...47,084,485 		JBrowse link
G Bcl2l11 BCL2 like 11 acts_upstream_of_or_within ISO (PMID:15818405) MGI PMID:15818405 NCBI chrNW_004955470:2,740,682...2,780,225 JBrowse link
G Edn3 endothelin 3 acts_upstream_of_or_within ISO (PMID:14138974) MGI PMID:14138974 NCBI chrNW_004955445:215,910...238,153
Ensembl chrNW_004955445:215,859...237,760 		JBrowse link
G Vps33a VPS33A core subunit of CORVET and HOPS complexes acts_upstream_of_or_within ISO (PMID:12538872) MGI PMID:12538872 NCBI chrNW_004955482:6,333,282...6,352,369
Ensembl chrNW_004955482:6,332,366...6,353,834 		JBrowse link
negative regulation of developmental pigmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tpcn2 two pore segment channel 2 involved_in ISO (PMID:27140606)
(MGI:6219928|PMID:27231233)		 UniProt PMID:27140606 PMID:27231233 MGI:6219928 NCBI chrNW_004955422:16,899,730...16,923,962
Ensembl chrNW_004955422:16,900,239...16,923,978 		JBrowse link
negative regulation of eye pigmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ihh Indian hedgehog signaling molecule acts_upstream_of_or_within ISO (PMID:17464332) MGI PMID:17464332 NCBI chrNW_004955453:14,376,665...14,382,536
Ensembl chrNW_004955453:14,376,718...14,381,747 		JBrowse link
positive regulation of developmental pigmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bax BCL2 associated X, apoptosis regulator acts_upstream_of_or_within ISO (PMID:9241272) MGI PMID:9241272 NCBI chrNW_004955559:1,695,960...1,700,246
Ensembl chrNW_004955559:1,695,960...1,700,244 		JBrowse link
G Bcl2 BCL2 apoptosis regulator acts_upstream_of_or_within ISO (PMID:9241272) MGI PMID:9241272 NCBI chrNW_004955402:46,911,125...47,084,214
Ensembl chrNW_004955402:46,916,266...47,084,485 		JBrowse link
positive regulation of melanocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adamts20 ADAM metallopeptidase with thrombospondin type 1 motif 20 acts_upstream_of_or_within ISO (PMID:18454205) MGI PMID:18454205 NCBI chrNW_004955500:2,688,281...2,850,667
Ensembl chrNW_004955500:2,689,717...2,850,667 		JBrowse link
G Adamts9 ADAM metallopeptidase with thrombospondin type 1 motif 9 acts_upstream_of_or_within ISO (PMID:18454205) MGI PMID:18454205 NCBI chrNW_004955517:1,302,560...1,443,708
Ensembl chrNW_004955517:1,302,922...1,440,245 		JBrowse link
G Bcl2 BCL2 apoptosis regulator acts_upstream_of_or_within ISO (PMID:16427619) MGI PMID:16427619 NCBI chrNW_004955402:46,911,125...47,084,214
Ensembl chrNW_004955402:46,916,266...47,084,485 		JBrowse link
G Kitlg KIT ligand acts_upstream_of_or_within ISO (PMID:16427619) MGI PMID:16427619 NCBI chrNW_004955405:25,816,137...25,969,006
Ensembl chrNW_004955405:25,886,447...25,969,395 		JBrowse link
G Zeb2 zinc finger E-box binding homeobox 2 involved_in ISO (MGI:5574413|PMID:24769727) BHF-UCL PMID:24769727 MGI:5574413 NCBI chrNW_004955440:10,755,658...10,881,044
Ensembl chrNW_004955440:10,756,014...10,795,491 		JBrowse link
positive regulation of pigment cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bloc1s5 biogenesis of lysosomal organelles complex 1 subunit 5 involved_in ISO (PMID:17182842) UniProt PMID:17182842 NCBI chrNW_004955465:5,910,095...5,943,996
Ensembl chrNW_004955465:5,910,160...5,942,662 		JBrowse link
G Bloc1s6 biogenesis of lysosomal organelles complex 1 subunit 6 involved_in ISO (PMID:17182842) UniProt PMID:17182842 NCBI chrNW_004955409:7,902,125...7,913,966
Ensembl chrNW_004955409:7,899,601...7,913,966 		JBrowse link
regulation of eye pigmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Spns2 SPNS lysolipid transporter 2, sphingosine-1-phosphate acts_upstream_of_or_within ISO (PMID:22664872) MGI PMID:22664872 NCBI chrNW_004955467:12,405,172...12,441,490
Ensembl chrNW_004955467:12,406,666...12,441,490 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12352
    pigmentation 100
      developmental pigmentation 50
        regulation of developmental pigmentation 14
          negative regulation of developmental pigmentation + 2
          positive regulation of developmental pigmentation + 8
          regulation of cuticle pigmentation + 0
          regulation of eye pigmentation + 2
          regulation of female pigmentation + 0
          regulation of male pigmentation + 0
Path 2
Term Annotations click to browse term
  biological_process 12352
    biological regulation 8890
      regulation of biological process 8624
        regulation of pigmentation 16
          regulation of developmental pigmentation 14
            negative regulation of developmental pigmentation + 2
            positive regulation of developmental pigmentation + 8
            regulation of cuticle pigmentation + 0
            regulation of eye pigmentation + 2
            regulation of female pigmentation + 0
            regulation of male pigmentation + 0
paths to the root