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ONTOLOGY REPORT - ANNOTATIONS

Term:cellular response to lipopolysaccharide
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Accession:GO:0071222 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria.
Synonyms:exact_synonym: cellular response to LPS
 broad_synonym: cellular response to endotoxin

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cellular response to lipopolysaccharide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca1 ATP binding cassette subfamily A member 1 involved_in ISO (MGI:4411947|PMID:19752193) UniProt PMID:19752193 MGI:4411947 NCBI chrNW_004955419:21,553,863...21,681,626
Ensembl chrNW_004955419:21,553,835...21,681,619 		JBrowse link
G Abcb1 ATP binding cassette subfamily B member 1 ISO RGD PMID:20300455 RGD:39456124 NCBI chrNW_004955432:4,911,774...5,085,349 JBrowse link
G Abcc2 ATP binding cassette subfamily C member 2 ISO RGD PMID:20702406 RGD:11081005 NCBI chrNW_004955507:5,724,788...5,791,281
Ensembl chrNW_004955507:5,724,762...5,790,812 		JBrowse link
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase acts_upstream_of_or_within ISO (PMID:8806812) MGI PMID:8806812 NCBI chrNW_004955513:652,048...799,182
Ensembl chrNW_004955513:653,252...799,239 		JBrowse link
G Acod1 aconitate decarboxylase 1 involved_in ISO (MGI:5490395|PMID:23610393), (MGI:5490396|PMID:23609450)
(PMID:23609450), (PMID:23610393), (PMID:35662396)		 UniProt PMID:23609450 PMID:23610393 PMID:35662396 MGI:5490395 MGI:5490396 NCBI chrNW_004955404:30,254,934...30,266,898
Ensembl chrNW_004955404:30,254,841...30,270,921 		JBrowse link
G Adam9 ADAM metallopeptidase domain 9 involved_in ISO (PMID:22480688) BHF-UCL PMID:22480688 NCBI chrNW_004955463:14,545,425...14,646,498
Ensembl chrNW_004955463:14,545,589...14,645,419 		JBrowse link
G Adamts13 ADAM metallopeptidase with thrombospondin type 1 motif 13 ISO RGD PMID:22871409 RGD:7207038 NCBI chrNW_004955513:2,761,386...2,786,447
Ensembl chrNW_004955513:2,764,186...2,786,187 		JBrowse link
G Aif1 allograft inflammatory factor 1 ISO RGD PMID:18717813 RGD:2313015 NCBI chrNW_004955437:157,509...158,919
Ensembl chrNW_004955437:157,509...158,919 		JBrowse link
G Akap8 A-kinase anchoring protein 8 involved_in ISO (MGI:5763364|PMID:19531803) UniProt PMID:19531803 MGI:5763364 NCBI chrNW_004955495:7,874,655...7,893,209
Ensembl chrNW_004955495:7,874,746...7,892,944 		JBrowse link
G Ankrd1 ankyrin repeat domain 1 involved_in ISO (PMID:7730328)
(MGI:5294542|PMID:17239933)		 BHF-UCL
UniProt		 PMID:7730328 PMID:17239933 MGI:5294542 NCBI chrNW_004955425:2,258,554...2,267,699
Ensembl chrNW_004955425:2,258,392...2,267,878 		JBrowse link
G Arg1 arginase 1 ISO RGD PMID:9013624 RGD:4144055 NCBI chrNW_004955436:12,235,767...12,247,817
Ensembl chrNW_004955436:12,235,767...12,251,972 		JBrowse link
G Arg2 arginase 2 ISO RGD PMID:11250887 RGD:4144048 NCBI chrNW_004955466:2,549,557...2,577,060
Ensembl chrNW_004955466:2,549,557...2,577,060 		JBrowse link
G Arid5a AT-rich interaction domain 5A involved_in ISO (MGI:5887181|PMID:27671645) UniProt PMID:27671645 MGI:5887181 NCBI chrNW_004955470:3,951,010...3,964,391
Ensembl chrNW_004955470:3,950,750...3,965,750 		JBrowse link
G Ass1 argininosuccinate synthase 1 ISO alveolar macrophages RGD PMID:9879717 RGD:4139906 NCBI chrNW_004955513:443,372...485,190
Ensembl chrNW_004955513:445,462...485,190 		JBrowse link
G Axl AXL receptor tyrosine kinase involved_in ISO (PMID:19657094) UniProt PMID:19657094 NCBI chrNW_004955555:189,445...218,509
Ensembl chrNW_004955555:189,174...218,565 		JBrowse link
G B2m beta-2-microglobulin involved_in ISO (PMID:23144825) UniProt PMID:23144825 NCBI chrNW_004955416:11,205,503...11,211,325
Ensembl chrNW_004955416:11,204,849...11,215,568 		JBrowse link
G Bcl10 BCL10 immune signaling adaptor involved_in ISO (PMID:16831874) UniProt PMID:16831874 NCBI chrNW_004955423:8,710,231...8,720,530
Ensembl chrNW_004955423:8,709,890...8,722,050 		JBrowse link
G Bcr BCR activator of RhoGEF and GTPase acts_upstream_of_or_within ISO (PMID:7889565) MGI PMID:7889565 NCBI chrNW_004955455:7,598,794...7,727,386
Ensembl chrNW_004955455:7,598,794...7,727,386 		JBrowse link
G Bysl bystin like ISO RGD PMID:15305856 RGD:2316201 NCBI chrNW_004955437:8,257,081...8,266,627
Ensembl chrNW_004955437:8,257,081...8,266,875 		JBrowse link
G Cactin cactin, spliceosome C complex subunit involved_in ISO (PMID:20829348) UniProt PMID:20829348 NCBI chrNW_004955495:5,561,359...5,571,945
Ensembl chrNW_004955495:5,561,979...5,571,682 		JBrowse link
G Camp cathelicidin antimicrobial peptide ISO RGD PMID:19879657 RGD:2316237 NCBI chrNW_004955420:24,911,920...24,914,698 JBrowse link
G Capn2 calpain 2 ISO RGD PMID:23390485 RGD:13792657 NCBI chrNW_004955520:1,287,829...1,315,318
Ensembl chrNW_004955520:1,286,356...1,315,328 		JBrowse link
G Casp7 caspase 7 involved_in ISO (PMID:22464733) UniProt PMID:22464733 NCBI chrNW_004955431:18,685,408...18,723,221
Ensembl chrNW_004955431:18,686,190...18,723,524 		JBrowse link
G Ccl20 C-C motif chemokine ligand 20 ISO RGD PMID:15618187 RGD:7483631 NCBI chrNW_004955453:6,846,625...6,850,007
Ensembl chrNW_004955453:6,846,549...6,850,031 		JBrowse link
G Ccl5 C-C motif chemokine ligand 5 ISO RGD PMID:20578038 RGD:4889899 NCBI chrNW_004955481:10,293,758...10,301,118
Ensembl chrNW_004955481:10,293,399...10,301,143 		JBrowse link
G Cd14 CD14 molecule acts_upstream_of_or_within
involved_in		 ISO (PMID:12594207)
(MGI:5645195|PMID:24380872), (MGI:80217|PMID:8612135)
(PMID:8612135)		 RGD
MGI
UniProt		 PMID:8612135 PMID:12594207 PMID:22511970 PMID:24380872 MGI:5645195 MGI:80217 RGD:7183752 NCBI chrNW_004955418:73,736...75,345
Ensembl chrNW_004955418:73,897...75,224 		JBrowse link
G Cd180 CD180 molecule acts_upstream_of_or_within ISO (PMID:10880523) MGI PMID:10880523 NCBI chrNW_004955446:1,940,498...1,959,804
Ensembl chrNW_004955446:1,940,496...1,961,287 		JBrowse link
G Cd300lb CD300 molecule like family member b acts_upstream_of_or_within ISO (PMID:22772446) MGI PMID:22772446 NCBI chrNW_004955553:1,382,594...1,392,592
Ensembl chrNW_004955553:1,383,433...1,392,598 		JBrowse link
G Cd36 CD36 molecule (CD36 blood group) acts_upstream_of_or_within ISO (PMID:16061696) MGI PMID:16061696 NCBI chrNW_004955410:5,003,720...5,120,903
Ensembl chrNW_004955410:5,003,668...5,075,313 		JBrowse link
G Cd40 CD40 molecule ISO RGD PMID:19271152 RGD:5491178 NCBI chrNW_004955445:11,191,817...11,202,156
Ensembl chrNW_004955445:11,190,603...11,202,093 		JBrowse link
G Cd68 CD68 molecule involved_in ISO (MGI:6274946|PMID:16157452) ARUK-UCL PMID:16157452 MGI:6274946 NCBI chrNW_004955467:9,340,490...9,343,912
Ensembl chrNW_004955467:9,341,364...9,343,836 		JBrowse link
G Cd80 CD80 molecule acts_upstream_of_or_within ISO (PMID:19047410) MGI PMID:19047410 NCBI chrNW_004955427:19,237,251...19,274,001
Ensembl chrNW_004955427:19,236,445...19,261,517 		JBrowse link
G Cd86 CD86 molecule acts_upstream_of_or_within ISO (PMID:19047410) RGD
MGI		 PMID:19047410 PMID:21039614 RGD:4892198 NCBI chrNW_004955427:21,375,820...21,436,767
Ensembl chrNW_004955427:21,375,794...21,435,874 		JBrowse link
G Cdc73 cell division cycle 73 involved_in ISO (MGI:5319608|PMID:17911113) UniProt PMID:17911113 MGI:5319608 NCBI chrNW_004955406:30,533,919...30,665,812
Ensembl chrNW_004955406:30,533,060...30,665,812 		JBrowse link
G Cdk19 cyclin dependent kinase 19 ISO RGD PMID:20066559 RGD:9590278 NCBI chrNW_004955411:35,312,722...35,411,951
Ensembl chrNW_004955411:35,312,722...35,412,246 		JBrowse link
G Cdk4 cyclin dependent kinase 4 acts_upstream_of_or_within ISO (PMID:8543804) MGI PMID:8543804 NCBI chrNW_004955458:5,457,927...5,460,718
Ensembl chrNW_004955458:5,453,732...5,460,718 		JBrowse link
G Cebpb CCAAT enhancer binding protein beta ISO RGD PMID:18405661 RGD:10401220 NCBI chrNW_004955445:8,060,432...8,061,289 JBrowse link
G Cebpe CCAAT enhancer binding protein epsilon ISO RGD PMID:9593684 RGD:728287 NCBI chrNW_004955409:37,186,282...37,187,914
Ensembl chrNW_004955409:37,186,039...37,187,921 		JBrowse link
G Cmpk2 cytidine/uridine monophosphate kinase 2 acts_upstream_of_or_within ISO (PMID:7751651) MGI PMID:7751651 NCBI chrNW_004955487:2,010,126...2,024,804
Ensembl chrNW_004955487:2,010,228...2,029,175 		JBrowse link
G Cpeb1 cytoplasmic polyadenylation element binding protein 1 ISO RGD PMID:21620800 RGD:9685153 NCBI chrNW_004955416:13,963,300...14,038,691
Ensembl chrNW_004955416:13,981,657...14,039,705 		JBrowse link
G Cr2 complement C3d receptor 2 acts_upstream_of_or_within ISO (PMID:19828624) MGI PMID:19828624 NCBI chrNW_004955406:42,877,041...42,910,970
Ensembl chrNW_004955406:42,876,966...42,911,564 		JBrowse link
G Csf2 colony stimulating factor 2 ISO RGD PMID:18387647 RGD:5131517 NCBI chrNW_004955408:3,452,009...3,454,255
Ensembl chrNW_004955408:3,451,965...3,454,312 		JBrowse link
G Csf3 colony stimulating factor 3 ISO RGD PMID:19732808 RGD:5133735 NCBI chrNW_004955451:14,688,181...14,690,126
Ensembl chrNW_004955451:14,688,181...14,690,126 		JBrowse link
G Ctr9 CTR9 homolog, Paf1/RNA polymerase II complex component involved_in ISO (MGI:5319608|PMID:17911113) UniProt PMID:17911113 MGI:5319608 NCBI chrNW_004955414:26,347,508...26,373,726
Ensembl chrNW_004955414:26,347,508...26,373,785 		JBrowse link
G Cx3cr1 C-X3-C motif chemokine receptor 1 involved_in ISO (MGI:6162390|PMID:23499256) RGD
ARUK-UCL		 PMID:10422773 PMID:23499256 MGI:6162390 RGD:4892028 NCBI chrNW_004955427:24,691,206...24,705,599
Ensembl chrNW_004955427:24,701,073...24,707,230 		JBrowse link
G Cxcl10 C-X-C motif chemokine ligand 10 acts_upstream_of_or_within ISO (PMID:23776175) MGI PMID:23776175 NCBI chrNW_004955433:748,392...750,890
Ensembl chrNW_004955433:748,284...750,927 		JBrowse link
G Cxcl16 C-X-C motif chemokine ligand 16 involved_in ISO (MGI:1891794|PMID:11017100) UniProt PMID:11017100 MGI:1891794 NCBI chrNW_004955467:10,132,461...10,136,649 JBrowse link
G Cxcl8 C-X-C motif chemokine ligand 8 involved_in ISO (PMID:19912257) BHF-UCL
RGD		 PMID:19912257 PMID:31442273 RGD:150540302 NCBI chrNW_004955474:247,326...250,355
Ensembl chrNW_004955474:241,501...250,643 		JBrowse link
G Dab2ip DAB2 interacting protein involved_in ISO (PMID:19948740)
(MGI:4453088|PMID:19948740)		 UniProt PMID:19948740 MGI:4453088 NCBI chrNW_004955419:6,229,437...6,416,619
Ensembl chrNW_004955419:6,228,591...6,416,402 		JBrowse link
G Ednrb endothelin receptor type B ISO RGD PMID:18091567 RGD:4892289 NCBI chrNW_004955404:29,394,253...29,425,358
Ensembl chrNW_004955404:29,394,164...29,425,358 		JBrowse link
G Efnb2 ephrin B2 ISO RGD PMID:33794069 RGD:127285659 NCBI chrNW_004955404:5,000,906...5,030,068
Ensembl chrNW_004955404:5,000,906...5,030,126 		JBrowse link
G Entpd1 ectonucleoside triphosphate diphosphohydrolase 1 ISO RGD PMID:23990338 RGD:9685490 NCBI chrNW_004955507:2,035,918...2,141,327
Ensembl chrNW_004955507:2,036,050...2,137,377 		JBrowse link
G Entpd2 ectonucleoside triphosphate diphosphohydrolase 2 ISO RGD PMID:23990338 RGD:9685490 NCBI chrNW_004955513:5,070,050...5,075,098
Ensembl chrNW_004955513:5,068,875...5,075,098 		JBrowse link
G Epas1 endothelial PAS domain protein 1 ISO RGD PMID:12099714 RGD:11041576 NCBI chrNW_004955441:13,244,626...13,328,220
Ensembl chrNW_004955441:13,244,626...13,328,369 		JBrowse link
G Ephb2 EPH receptor B2 ISO RGD PMID:33794069 RGD:127285659 NCBI chrNW_004955452:2,844,713...2,986,790
Ensembl chrNW_004955452:2,844,713...2,980,445 		JBrowse link
G Esr2 estrogen receptor 2 ISO negative regulation of cell death RGD PMID:21127968 RGD:5508811 NCBI chrNW_004955466:5,587,003...5,644,765
Ensembl chrNW_004955466:5,575,088...5,638,946 		JBrowse link
G Fcgr2b Fc fragment of IgG receptor IIb ISO RGD PMID:19106808 RGD:5147925 NCBI chrNW_004955462:14,639,396...14,653,801 JBrowse link
G Fgfr1 fibroblast growth factor receptor 1 ISO RGD PMID:30250515 RGD:25330356 NCBI chrNW_004955463:14,013,247...14,064,354
Ensembl chrNW_004955463:14,013,247...14,064,111 		JBrowse link
G Fn1 fibronectin 1 ISO RGD PMID:11819312 RGD:7205475 NCBI chrNW_004955457:629,599...694,948
Ensembl chrNW_004955457:629,518...696,975 		JBrowse link
G Fubp1 far upstream element binding protein 1 ISO RGD PMID:23797733 RGD:13673879 NCBI chrNW_004955423:15,245,645...15,278,628
Ensembl chrNW_004955423:15,245,610...15,278,628 		JBrowse link
G Gata1 GATA binding protein 1 ISO RGD PMID:17687519 RGD:5131526 NCBI chrNW_004955543:334,581...342,042
Ensembl chrNW_004955543:334,061...342,061 		JBrowse link
G Gbp5 guanylate binding protein 5 involved_in ISO (MGI:5565107|PMID:24715728) UniProt PMID:24715728 MGI:5565107 NCBI chrNW_004955423:4,914,430...4,926,850
Ensembl chrNW_004955423:4,917,590...4,926,007 		JBrowse link
G Gfer growth factor, augmenter of liver regeneration ISO RGD PMID:23073658 RGD:9685733 NCBI chrNW_004955442:15,280,753...15,283,405
Ensembl chrNW_004955442:15,281,419...15,283,266 		JBrowse link
G Gfi1 growth factor independent 1 transcriptional repressor involved_in ISO (PMID:20547752)
(MGI:4819887|PMID:20547752)		 UniProt PMID:20547752 MGI:4819887 NCBI chrNW_004955423:2,024,084...2,032,530
Ensembl chrNW_004955423:2,022,417...2,033,149 		JBrowse link
G Ghsr growth hormone secretagogue receptor ISO RGD PMID:15155262 RGD:12905047 NCBI chrNW_004955420:2,483,173...2,486,414
Ensembl chrNW_004955420:2,478,877...2,487,215 		JBrowse link
G Git1 GIT ArfGAP 1 involved_in ISO (MGI:6478067|PMID:32460388) UniProt PMID:32460388 MGI:6478067 NCBI chrNW_004955481:3,671,728...3,681,279
Ensembl chrNW_004955481:3,670,111...3,685,051 		JBrowse link
G Grk6 G protein-coupled receptor kinase 6 ISO RGD PMID:23359120 RGD:13792782 NCBI chrNW_004955408:29,665,534...29,684,225
Ensembl chrNW_004955408:29,665,260...29,684,207 		JBrowse link
G Gstp1 glutathione S-transferase pi 1 involved_in ISO (MGI:5009411|PMID:16023107) BHF-UCL PMID:16023107 MGI:5009411 NCBI chrNW_004955422:17,914,228...17,916,918
Ensembl chrNW_004955422:17,914,305...17,917,428 		JBrowse link
G Hadhb hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta involved_in ISO (PMID:32513690) MGI PMID:32513690 NCBI chrNW_004955469:8,233,980...8,272,149
Ensembl chrNW_004955469:8,233,980...8,274,450 		JBrowse link
G Hamp hepcidin antimicrobial peptide ISO RGD PMID:23506423 RGD:11041627 NCBI chrNW_004955468:4,576,080...4,577,591
Ensembl chrNW_004955468:4,575,510...4,577,649 		JBrowse link
G Havcr2 hepatitis A virus cellular receptor 2 involved_in ISO (MGI:5705210|PMID:25337993) UniProt PMID:25337993 MGI:5705210 NCBI chrNW_004955408:11,289,920...11,311,216
Ensembl chrNW_004955408:11,291,937...11,311,320 		JBrowse link
G Hdac5 histone deacetylase 5 ISO RGD PMID:22933299 RGD:9590257 NCBI chrNW_004955451:17,223,217...17,246,451
Ensembl chrNW_004955451:17,223,287...17,244,051 		JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha ISO RGD PMID:19940979 RGD:5147884 NCBI chrNW_004955466:8,000,311...8,022,497
Ensembl chrNW_004955466:8,000,044...8,022,497 		JBrowse link
G Hmgb1 high mobility group box 1 involved_in ISO (MGI:6244743|PMID:28096568) ARUK-UCL PMID:28096568 MGI:6244743 NCBI chrNW_004955431:15,373,207...15,377,339
Ensembl chrNW_004955431:15,373,207...15,377,339 		JBrowse link
G Hmgb2 high mobility group box 2 involved_in ISO (PMID:19811285) UniProt PMID:19811285 NCBI chrNW_004955403:33,656,314...33,659,115
Ensembl chrNW_004955403:33,656,300...33,659,428 		JBrowse link
G Hmgcs2 3-hydroxy-3-methylglutaryl-CoA synthase 2 ISO RGD PMID:11578593 RGD:1599044 NCBI chrNW_004955435:22,804,484...22,820,807
Ensembl chrNW_004955435:22,804,484...22,821,482 		JBrowse link
G Hnrnpm heterogeneous nuclear ribonucleoprotein M ISO RGD PMID:14597422 RGD:10054261 NCBI chrNW_004955563:933,824...975,064 JBrowse link
G Hsf1 heat shock transcription factor 1 ISO RGD PMID:21540803 RGD:10402943 NCBI chrNW_004955454:2,907,265...2,932,352
Ensembl chrNW_004955454:2,907,265...2,932,351 		JBrowse link
G Icam1 intercellular adhesion molecule 1 ISO RGD PMID:20674665 RGD:4145373 NCBI chrNW_004955495:1,561,464...1,573,282
Ensembl chrNW_004955495:1,561,714...1,574,755 		JBrowse link
G Ifnb1 interferon beta 1 ISO RGD PMID:18412159 RGD:401854236 NCBI chrNW_004955434:23,301,623...23,302,304 JBrowse link
G Ifng interferon gamma acts_upstream_of_or_within ISO (PMID:18791161) MGI PMID:18791161 NCBI chrNW_004955458:14,643,333...14,648,020
Ensembl chrNW_004955458:14,643,313...14,648,045 		JBrowse link
G Il10 interleukin 10 involved_in
acts_upstream_of_or_within		 ISO (PMID:23071313)
(PMID:19047410), (PMID:21609717)		 ARUK-UCL
MGI		 PMID:19047410 PMID:21609717 PMID:23071313 NCBI chrNW_004955406:42,307,789...42,312,255
Ensembl chrNW_004955406:42,307,664...42,312,779 		JBrowse link
G Il12a interleukin 12A acts_upstream_of_or_within ISO (PMID:19047410) MGI PMID:19047410 NCBI chrNW_004955448:10,611,131...10,617,911 JBrowse link
G Il12b interleukin 12B acts_upstream_of_or_within ISO (PMID:18025219), (PMID:21606371) MGI PMID:18025219 PMID:21606371 NCBI chrNW_004955408:13,302,506...13,316,300
Ensembl chrNW_004955408:13,304,219...13,312,620 		JBrowse link
G Il18 interleukin 18 ISO RGD PMID:11739527 RGD:729357 NCBI chrNW_004955412:13,807,361...13,826,007
Ensembl chrNW_004955412:13,806,553...13,825,634 		JBrowse link
G Il1b interleukin 1 beta ISO RGD PMID:23200736 RGD:7175528 NCBI chrNW_004955470:1,486,936...1,491,888
Ensembl chrNW_004955470:1,486,967...1,491,947 		JBrowse link
G Il24 interleukin 24 ISO RGD PMID:12182458 RGD:5147432 NCBI chrNW_004955406:42,431,845...42,437,392
Ensembl chrNW_004955406:42,432,795...42,437,016 		JBrowse link
G Il6 interleukin 6 acts_upstream_of_or_within ISO (PMID:19047410), (PMID:21606371)
(PMID:23776175)		 RGD
MGI		 PMID:2789217 PMID:19047410 PMID:21606371 PMID:23776175 RGD:11049548 NCBI chrNW_004955410:25,079,835...25,084,390 JBrowse link
G Irak1 interleukin 1 receptor associated kinase 1 ISO RGD PMID:15793310 RGD:1579809 NCBI chrNW_004955580:663,651...668,622
Ensembl chrNW_004955580:661,609...668,622 		JBrowse link
G Irf3 interferon regulatory factor 3 acts_upstream_of_or_within ISO (PMID:21606371) MGI PMID:21606371 NCBI chrNW_004955559:1,223,986...1,228,671
Ensembl chrNW_004955559:1,224,874...1,228,624 		JBrowse link
G Irf8 interferon regulatory factor 8 acts_upstream_of_or_within ISO (PMID:9348310) MGI PMID:9348310 NCBI chrNW_004955541:973,004...988,493
Ensembl chrNW_004955541:973,022...990,106 		JBrowse link
G Irgm immunity related GTPase M involved_in ISO (PMID:25891078) UniProt PMID:25891078 NCBI chrNW_004955408:2,338,510...2,344,566 JBrowse link
G Jak2 Janus kinase 2 acts_upstream_of_or_within ISO (PMID:21606371) MGI PMID:21606371 NCBI chrNW_004955434:9,227,897...9,341,208
Ensembl chrNW_004955434:9,227,595...9,341,208 		JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit involved_in ISO (PMID:25110868) AgBase PMID:25110868 NCBI chrNW_004955464:1,107,598...1,110,326 JBrowse link
G Kmo kynurenine 3-monooxygenase ISO RGD PMID:26524415 RGD:13703043 NCBI chrNW_004955406:10,496,102...10,527,181
Ensembl chrNW_004955406:10,493,379...10,527,201 		JBrowse link
G Ldoc1 LDOC1 regulator of NFKB signaling involved_in ISO (PMID:27812135) UniProt PMID:27812135 NCBI chrNW_004955539:127,705...129,147
Ensembl chrNW_004955539:127,887...128,324 		JBrowse link
G Litaf lipopolysaccharide induced TNF factor acts_upstream_of_or_within ISO (PMID:16954198) MGI PMID:16954198 NCBI chrNW_004955442:7,054,418...7,084,973
Ensembl chrNW_004955442:7,077,823...7,083,437 		JBrowse link
G LOC102006100 TIR domain-containing adapter molecule 2 involved_in ISO (PMID:22685567)
(PMID:19412184)		 UniProt PMID:19412184 PMID:22685567 NCBI chrNW_004955408:35,342,733...35,382,821
Ensembl chrNW_004955408:35,374,508...35,382,314 		JBrowse link
G LOC102011010 steroid 17-alpha-hydroxylase/17,20 lyase ISO RGD PMID:20665543 RGD:4145535 NCBI chrNW_004955485:7,615,132...7,652,899
Ensembl chrNW_004955485:7,645,363...7,650,658 		JBrowse link
G LOC102014960 cholesterol side-chain cleavage enzyme, mitochondrial ISO RGD PMID:20665543 RGD:4145535 NCBI chrNW_004955450:3,433,310...3,484,462
Ensembl chrNW_004955450:3,474,491...3,484,232 		JBrowse link
G Ltc4s leukotriene C4 synthase ISO RGD PMID:9794912 RGD:2316634 NCBI chrNW_004955408:788,856...791,505 JBrowse link
G Ly96 lymphocyte antigen 96 involved_in ISO (MGI:5645195|PMID:24380872) UniProt PMID:24380872 MGI:5645195 NCBI chrNW_004955444:6,356,121...6,387,350
Ensembl chrNW_004955444:6,356,154...6,387,529 		JBrowse link
G Malt1 MALT1 paracaspase involved_in ISO (MGI:3694380|PMID:16831874) UniProt PMID:16831874 MGI:3694380 NCBI chrNW_004955402:42,919,480...42,968,873
Ensembl chrNW_004955402:42,911,649...42,972,429 		JBrowse link
G Map2k3 mitogen-activated protein kinase kinase 3 ISO RGD PMID:14670949 RGD:7495812 NCBI chrNW_004955577:1,225,033...1,249,510
Ensembl chrNW_004955577:1,237,287...1,248,541 		JBrowse link
G Map2k7 mitogen-activated protein kinase kinase 7 involved_in ISO (MGI:1101248|PMID:9405446) UniProt PMID:9405446 MGI:1101248 NCBI chrNW_004955563:1,352,638...1,361,598
Ensembl chrNW_004955563:1,352,638...1,361,598 		JBrowse link
G Mapk14 mitogen-activated protein kinase 14 acts_upstream_of_or_within ISO (PMID:23776175) MGI PMID:23776175 NCBI chrNW_004955437:3,836,331...3,884,083
Ensembl chrNW_004955437:3,838,232...3,884,083 		JBrowse link
G Mapk8 mitogen-activated protein kinase 8 acts_upstream_of_or_within ISO (PMID:23776175) MGI PMID:23776175 NCBI chrNW_004955556:1,593,552...1,705,543
Ensembl chrNW_004955556:1,593,494...1,665,784 		JBrowse link
G Mapk9 mitogen-activated protein kinase 9 ISO RGD PMID:9475517 RGD:2304245 NCBI chrNW_004955408:391,094...430,638
Ensembl chrNW_004955408:391,094...430,981 		JBrowse link
G Mef2c myocyte enhancer factor 2C involved_in ISO (MGI:3829850|PMID:18955699) UniProt PMID:18955699 MGI:3829850 NCBI chrNW_004955418:22,537,388...22,701,434
Ensembl chrNW_004955418:22,537,285...22,701,434 		JBrowse link
G Mmp8 matrix metallopeptidase 8 involved_in ISO (MGI:6201889|PMID:25049354) ARUK-UCL PMID:25049354 MGI:6201889 RGD:13792525 NCBI chrNW_004955412:5,928,997...5,939,012
Ensembl chrNW_004955412:5,928,997...5,939,012 		JBrowse link
G Mmp9 matrix metallopeptidase 9 ISO RGD PMID:21683124 RGD:7207286 NCBI chrNW_004955445:11,295,500...11,303,322
Ensembl chrNW_004955445:11,295,448...11,303,288 		JBrowse link
G Mrc1 mannose receptor C-type 1 acts_upstream_of_or_within ISO (PMID:22832163) MGI PMID:22832163 NCBI chrNW_004955429:10,139,398...10,232,541
Ensembl chrNW_004955429:10,139,355...10,232,600 		JBrowse link
G Myd88 MYD88 innate immune signal transduction adaptor involved_in ISO (MGI:6355543|PMID:17660297) ARUK-UCL PMID:17660297 MGI:6355543 NCBI chrNW_004955427:25,553,589...25,557,654
Ensembl chrNW_004955427:25,553,589...25,559,138 		JBrowse link
G Ncl nucleolin ISO RGD PMID:21309751 RGD:9686449 NCBI chrNW_004955453:4,154,627...4,164,253
Ensembl chrNW_004955453:4,154,627...4,164,253 		JBrowse link
G Nfkb1 nuclear factor kappa B subunit 1 involved_in
acts_upstream_of_or_within		 ISO (PMID:31786261)
(PMID:23776175)		 RGD
MGI		 PMID:16842873 PMID:23776175 PMID:31786261 RGD:10045666 NCBI chrNW_004955496:5,842,734...5,950,995
Ensembl chrNW_004955496:5,842,600...5,927,885 		JBrowse link
G Nfkbib NFKB inhibitor beta acts_upstream_of_or_within ISO (PMID:20060382) MGI PMID:20060382 NCBI chrNW_004955468:617,078...626,151
Ensembl chrNW_004955468:617,078...626,151 		JBrowse link
G Nfkbil1 NFKB inhibitor like 1 involved_in ISO (PMID:20829348) UniProt PMID:20829348 NCBI chrNW_004955437:90,623...100,918
Ensembl chrNW_004955437:90,577...100,918 		JBrowse link
G Nfkbiz NFKB inhibitor zeta involved_in ISO (PMID:27129283) MGI PMID:27129283 NCBI chrNW_004955427:3,350,174...3,358,609
Ensembl chrNW_004955427:3,350,174...3,360,379 		JBrowse link
G Nlrp3 NLR family pyrin domain containing 3 involved_in ISO (PMID:28847925)
(MGI:6095076|PMID:28847925)
(PMID:12483741)		 UniProt
BHF-UCL		 PMID:12483741 PMID:28847925 MGI:6095076 NCBI chrNW_004955581:597,952...616,903
Ensembl chrNW_004955581:597,667...617,410 		JBrowse link
G Nod2 nucleotide binding oligomerization domain containing 2 involved_in ISO (PMID:27812135) UniProt PMID:27812135 NCBI chrNW_004955433:8,746,213...8,780,119
Ensembl chrNW_004955433:8,746,004...8,782,710 		JBrowse link
G Nos2 nitric oxide synthase 2 acts_upstream_of_or_within ISO (PMID:18025219), (PMID:18791161) RGD
MGI		 PMID:18025219 PMID:18791161 PMID:21975807 RGD:5508737 NCBI chrNW_004955481:5,197,957...5,232,406
Ensembl chrNW_004955481:5,201,234...5,231,961 		JBrowse link
G Nr1d1 nuclear receptor subfamily 1 group D member 1 involved_in ISO (PMID:18511497) BHF-UCL PMID:18511497 NCBI chrNW_004955451:14,743,763...14,750,903
Ensembl chrNW_004955451:14,742,735...14,750,999 		JBrowse link
G Nr1h3 nuclear receptor subfamily 1 group H member 3 involved_in ISO (PMID:18511497)
(MGI:5009771|PMID:21187453)		 BHF-UCL PMID:18511497 PMID:21187453 MGI:5009771 NCBI chrNW_004955422:940,310...954,170
Ensembl chrNW_004955422:940,310...949,049 		JBrowse link
G Nr1h4 nuclear receptor subfamily 1 group H member 4 involved_in ISO (MGI:5707586|PMID:18972444) UniProt PMID:18972444 MGI:5707586 NCBI chrNW_004955405:36,160,360...36,236,258
Ensembl chrNW_004955405:36,160,049...36,237,751 		JBrowse link
G Nuggc nuclear GTPase, germinal center associated involved_in ISO (PMID:19734146) UniProt PMID:19734146 NCBI chrNW_004955403:50,507,971...50,558,881
Ensembl chrNW_004955403:50,507,116...50,558,826 		JBrowse link
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase ISO RGD PMID:19098112 RGD:9590190 NCBI chrNW_004955475:11,062,258...11,112,252
Ensembl chrNW_004955475:11,062,076...11,114,169 		JBrowse link
G Oprk1 opioid receptor kappa 1 ISO RGD PMID:9645969 RGD:9831421 NCBI chrNW_004955454:12,741,577...12,751,282
Ensembl chrNW_004955454:12,744,765...12,752,226 		JBrowse link
G P2ry2 purinergic receptor P2Y2 ISO RGD PMID:18689605 RGD:2316659 NCBI chrNW_004955414:18,248,082...18,271,047
Ensembl chrNW_004955414:18,248,082...18,260,450 		JBrowse link
G Pabpn1 poly(A) binding protein nuclear 1 involved_in ISO (MGI:5795816|PMID:22844456) UniProt PMID:22844456 MGI:5795816 NCBI chrNW_004955409:37,000,423...37,004,823
Ensembl chrNW_004955409:37,000,451...37,004,682 		JBrowse link
G Paf1 PAF1 homolog, Paf1/RNA polymerase II complex component involved_in ISO (MGI:5319608|PMID:17911113) UniProt PMID:17911113 MGI:5319608 NCBI chrNW_004955468:166,477...172,200 JBrowse link
G Park7 Parkinsonism associated deglycase ISO RGD PMID:23847046 RGD:13462068 NCBI chrNW_004955486:4,974,130...4,985,927
Ensembl chrNW_004955486:4,969,497...4,985,885 		JBrowse link
G Pdcd4 programmed cell death 4 involved_in ISO (MGI:4438829|PMID:19946272) BHF-UCL PMID:19946272 MGI:4438829 NCBI chrNW_004955485:530,642...553,508
Ensembl chrNW_004955485:529,860...553,601 		JBrowse link
G Pde2a phosphodiesterase 2A involved_in ISO (MGI:5294515|PMID:21571906) UniProt PMID:21571906 MGI:5294515 NCBI chrNW_004955414:18,765,591...18,826,717
Ensembl chrNW_004955414:18,735,822...18,827,236 		JBrowse link
G Pde4b phosphodiesterase 4B acts_upstream_of_or_within ISO (PMID:15585880) MGI PMID:15585880 NCBI chrNW_004955423:24,464,503...24,906,409
Ensembl chrNW_004955423:24,463,953...24,906,394 		JBrowse link
G Pde4d phosphodiesterase 4D acts_upstream_of_or_within ISO (PMID:15585880) MGI PMID:15585880 NCBI chrNW_004955446:7,914,326...9,252,527
Ensembl chrNW_004955446:8,211,877...9,252,653 		JBrowse link
G Plaa phospholipase A2 activating protein involved_in ISO (PMID:28007986) UniProt PMID:28007986 NCBI chrNW_004955472:7,879,196...7,915,040
Ensembl chrNW_004955472:7,879,196...7,919,834 		JBrowse link
G Plau plasminogen activator, urokinase ISO RGD PMID:19184369 RGD:7241806 NCBI chrNW_004955437:17,995,726...18,000,542
Ensembl chrNW_004955437:17,994,537...18,000,209 		JBrowse link
G Plscr1 phospholipid scramblase 1 involved_in ISO (MGI:3762685|PMID:17590392) UniProt PMID:17590392 MGI:3762685 NCBI chrNW_004955474:10,953,381...10,989,100 JBrowse link
G Plscr3 phospholipid scramblase 3 involved_in ISO (MGI:3762685|PMID:17590392) UniProt PMID:17590392 MGI:3762685 NCBI chrNW_004955467:9,534,462...9,539,738
Ensembl chrNW_004955467:9,535,261...9,539,738 		JBrowse link
G Plscr4 phospholipid scramblase 4 involved_in ISO (MGI:3762685|PMID:17590392) UniProt PMID:17590392 MGI:3762685 NCBI chrNW_004955474:11,299,390...11,331,982
Ensembl chrNW_004955474:11,299,375...11,333,382 		JBrowse link
G Ppard peroxisome proliferator activated receptor delta ISO RGD PMID:15728586 RGD:1580656 NCBI chrNW_004955437:3,285,281...3,354,099
Ensembl chrNW_004955437:3,288,830...3,357,048 		JBrowse link
G Ppargc1a PPARG coactivator 1 alpha ISO RGD PMID:19853624 RGD:10059687 NCBI chrNW_004955480:543,397...1,188,376
Ensembl chrNW_004955480:1,078,322...1,188,435 		JBrowse link
G Ppm1e protein phosphatase, Mg2+/Mn2+ dependent 1E involved_in ISO (PMID:27793001) BHF-UCL PMID:27793001 NCBI chrNW_004955451:3,989,575...4,137,400
Ensembl chrNW_004955451:3,986,715...4,137,134 		JBrowse link
G Prpf8 pre-mRNA processing factor 8 ISO RGD PMID:1345341 RGD:10045884 NCBI chrNW_004955481:1,499,634...1,530,670
Ensembl chrNW_004955481:1,499,634...1,530,670 		JBrowse link
G Ptger3 prostaglandin E receptor 3 ISO RGD PMID:14636300 RGD:10043359 NCBI chrNW_004955423:21,096,926...21,164,435 JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 ISO RGD PMID:18769055 RGD:2300271 NCBI chrNW_004955406:25,077,988...25,086,259
Ensembl chrNW_004955406:25,079,945...25,086,171 		JBrowse link
G Rara retinoic acid receptor alpha involved_in ISO (MGI:4411947|PMID:19752193) UniProt PMID:19752193 MGI:4411947 NCBI chrNW_004955451:14,876,663...14,917,134
Ensembl chrNW_004955451:14,897,726...14,917,134 		JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit involved_in ISO (MGI:4819887|PMID:20547752)
(PMID:25762865)		 RGD
UniProt
ARUK-UCL		 PMID:9918814 PMID:15728586 PMID:20547752 PMID:25762865 MGI:4819887 RGD:1580656 RGD:2298880 NCBI chrNW_004955422:19,602,930...19,612,263
Ensembl chrNW_004955422:19,603,345...19,611,516 		JBrowse link
G Rhoa ras homolog family member A involved_in ISO (PMID:19734146) UniProt PMID:19734146 NCBI chrNW_004955532:1,300,821...1,347,453
Ensembl chrNW_004955532:1,300,462...1,347,451 		JBrowse link
G Ripk2 receptor interacting serine/threonine kinase 2 acts_upstream_of_or_within ISO (PMID:11894098)
(PMID:11894097)		 MGI PMID:11894097 PMID:11894098 NCBI chrNW_004955417:6,669,675...6,698,142
Ensembl chrNW_004955417:6,669,675...6,702,228 		JBrowse link
G Sbno2 strawberry notch homolog 2 involved_in ISO (MGI:5660440|PMID:25903009) UniProt PMID:25903009 MGI:5660440 NCBI chrNW_004955495:6,709,190...6,770,816
Ensembl chrNW_004955495:6,729,205...6,772,180 		JBrowse link
G Selenos selenoprotein S involved_in ISO (PMID:18675776) BHF-UCL PMID:18675776 NCBI chrNW_004955416:28,152,984...28,162,173
Ensembl chrNW_004955416:28,153,460...28,162,095 		JBrowse link
G Serpine1 serpin family E member 1 involved_in ISO (PMID:19916862) RGD
BHF-UCL		 PMID:19916862 PMID:20060032 RGD:13208812 NCBI chrNW_004955456:16,147,523...16,157,040
Ensembl chrNW_004955456:16,145,944...16,157,142 		JBrowse link
G Sgms1 sphingomyelin synthase 1 ISO RGD PMID:12353928 RGD:1302423 NCBI chrNW_004955425:5,507,905...5,819,357
Ensembl chrNW_004955425:5,784,751...5,822,488 		JBrowse link
G Shpk sedoheptulokinase involved_in ISO (PMID:22682222)
(MGI:5428058|PMID:22682222)		 UniProt PMID:22682222 MGI:5428058 NCBI chrNW_004955467:13,169,072...13,209,585
Ensembl chrNW_004955467:13,169,063...13,212,269 		JBrowse link
G Sirpa signal regulatory protein alpha involved_in ISO (MGI:3760575|PMID:17954568) ARUK-UCL PMID:17954568 MGI:3760575 NCBI chrNW_004955415:13,030,752...13,072,735 JBrowse link
G Slc12a2 solute carrier family 12 member 2 involved_in ISO (PMID:31786261) MGI PMID:31786261 NCBI chrNW_004955415:1,138,297...1,219,241
Ensembl chrNW_004955415:1,137,327...1,219,241 		JBrowse link
G Slc7a5 solute carrier family 7 member 5 ISO RGD PMID:29687865 RGD:151357004 NCBI chrNW_004955541:2,103,437...2,129,668
Ensembl chrNW_004955541:2,103,384...2,130,310 		JBrowse link
G Socs1 suppressor of cytokine signaling 1 ISO RGD PMID:21742974 RGD:151347181 NCBI chrNW_004955442:7,321,337...7,323,109
Ensembl chrNW_004955442:7,321,337...7,323,109 		JBrowse link
G Spon2 spondin 2 acts_upstream_of_or_within ISO (PMID:14691481) MGI PMID:14691481 NCBI chrNW_004955514:598,840...603,390
Ensembl chrNW_004955514:596,829...604,051 		JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase ISO RGD PMID:20149623 RGD:2325014 NCBI chrNW_004955445:19,213,210...19,227,670
Ensembl chrNW_004955445:19,215,161...19,228,695 		JBrowse link
G Stap1 signal transducing adaptor family member 1 involved_in ISO (MGI:3831067|PMID:19100238) BHF-UCL PMID:19100238 MGI:3831067 NCBI chrNW_004955447:5,292,708...5,345,214
Ensembl chrNW_004955447:5,293,227...5,330,187 		JBrowse link
G Star steroidogenic acute regulatory protein ISO RGD PMID:20665543 RGD:4145535 NCBI chrNW_004955463:13,760,089...13,765,245
Ensembl chrNW_004955463:13,760,089...13,765,244 		JBrowse link
G Stat1 signal transducer and activator of transcription 1 acts_upstream_of_or_within ISO (PMID:21606371) MGI PMID:21606371 NCBI chrNW_004955403:8,156,660...8,192,018
Ensembl chrNW_004955403:8,156,660...8,194,762 		JBrowse link
G Tbxa2r thromboxane A2 receptor ISO RGD PMID:10513923 RGD:11059603 NCBI chrNW_004955495:5,539,382...5,557,441
Ensembl chrNW_004955495:5,539,889...5,557,441 		JBrowse link
G Tfpi tissue factor pathway inhibitor ISO RGD PMID:11816723 RGD:727341 NCBI chrNW_004955403:10,925,155...11,004,229
Ensembl chrNW_004955403:10,924,893...11,004,284 		JBrowse link
G Ticam1 toll like receptor adaptor molecule 1 involved_in ISO (MGI:3718934|PMID:17658277) ParkinsonsUK-UCL PMID:17658277 MGI:3718934 NCBI chrNW_004955495:4,197,083...4,204,999
Ensembl chrNW_004955495:4,202,372...4,204,513 		JBrowse link
G Ticam2 toll like receptor adaptor molecule 2 involved_in ISO (PMID:19412184)
(PMID:22685567)		 UniProt PMID:19412184 PMID:22685567 NCBI chrNW_004955411:31,010,373...31,042,321 JBrowse link
G Tlr4 toll like receptor 4 acts_upstream_of_or_within
involved_in		 ISO (PMID:14691481)
(PMID:10880523), (PMID:24740015)
(MGI:4421230|PMID:20051628), (MGI:5462034|PMID:21880694)
(MGI:6244743|PMID:28096568)
(PMID:30321456)
(PMID:11432859)		 RGD
MGI
BHF-UCL
ARUK-UCL
UniProt		 PMID:10880523 PMID:11432859 PMID:14691481 PMID:20051628 PMID:20438866 More... MGI:4421230 MGI:5462034 MGI:6244743 RGD:7777075 NCBI chrNW_004955419:10,190,937...10,201,896
Ensembl chrNW_004955419:10,191,120...10,202,135 		JBrowse link
G Tlr5 toll like receptor 5 ISO RGD PMID:21308757 RGD:5129495 NCBI chrNW_004955520:1,544,840...1,562,081
Ensembl chrNW_004955520:1,556,523...1,559,093 		JBrowse link
G Tlr9 toll like receptor 9 ISO RGD PMID:20655116 PMID:21308757 RGD:5129495 RGD:5130179 NCBI chrNW_004955532:3,828,645...3,832,699
Ensembl chrNW_004955532:3,828,775...3,832,582 		JBrowse link
G Tnf tumor necrosis factor acts_upstream_of_or_within
involved_in		 ISO (PMID:19047410), (PMID:20060382), (PMID:21606371)
(MGI:7387167|PMID:29849090)		 RGD
MGI
BHF-UCL		 PMID:10959811 PMID:15602748 PMID:17964727 PMID:19047410 PMID:20060382 More... MGI:7387167 RGD:14994703 RGD:14995441 RGD:1582142 NCBI chrNW_004955437:117,267...119,899
Ensembl chrNW_004955437:117,206...120,700 		JBrowse link
G Tnfaip3 TNF alpha induced protein 3 involved_in ISO (PMID:19912257), (PMID:21127049), (PMID:21220427) BHF-UCL PMID:19912257 PMID:21127049 PMID:21220427 NCBI chrNW_004955436:21,566,591...21,581,551
Ensembl chrNW_004955436:21,566,423...21,578,469 		JBrowse link
G Tnfrsf1b TNF receptor superfamily member 1B involved_in ISO (PMID:22480688) BHF-UCL PMID:22480688 NCBI chrNW_004955486:1,790,531...1,817,986
Ensembl chrNW_004955486:1,792,115...1,818,362 		JBrowse link
G Tnfsf4 TNF superfamily member 4 involved_in ISO (PMID:20844189) BHF-UCL PMID:20844189 NCBI chrNW_004955406:13,477,077...13,493,309
Ensembl chrNW_004955406:13,477,077...13,493,309 		JBrowse link
G Tnip2 TNFAIP3 interacting protein 2 involved_in ISO (MGI:3656197|PMID:16633345) UniProt PMID:16633345 MGI:3656197 NCBI chrNW_004955514:1,682,641...1,687,881 JBrowse link
G Tnip3 TNFAIP3 interacting protein 3 involved_in ISO (PMID:17088249) UniProt PMID:17088249 NCBI chrNW_004955428:19,479,633...19,511,738
Ensembl chrNW_004955428:19,479,638...19,511,758 		JBrowse link
G Traf6 TNF receptor associated factor 6 acts_upstream_of_or_within ISO (PMID:23776175) MGI PMID:23776175 NCBI chrNW_004955422:9,925,765...9,950,354
Ensembl chrNW_004955422:9,932,680...9,949,100 		JBrowse link
G Trim41 tripartite motif containing 41 involved_in ISO (PMID:27812135) UniProt PMID:27812135 NCBI chrNW_004955530:84,683...95,835
Ensembl chrNW_004955530:84,683...95,835 		JBrowse link
G Tspo translocator protein ISO RGD PMID:14678758 RGD:2317158 NCBI chrNW_004955413:28,309,105...28,315,075
Ensembl chrNW_004955413:28,308,658...28,315,075 		JBrowse link
G Vim vimentin involved_in ISO (PMID:27812135) UniProt PMID:27812135 NCBI chrNW_004955429:10,708,852...10,716,743
Ensembl chrNW_004955429:10,707,719...10,717,554 		JBrowse link
G Vldlr very low density lipoprotein receptor ISO RGD PMID:16376325 RGD:1625574 NCBI chrNW_004955434:7,013,092...7,050,103
Ensembl chrNW_004955434:7,013,092...7,050,103 		JBrowse link
G Vwf von Willebrand factor ISO RGD PMID:17708840 RGD:11079229 NCBI chrNW_004955413:3,672,470...3,825,588
Ensembl chrNW_004955413:3,672,470...3,819,571 		JBrowse link
G Wnt5a Wnt family member 5A involved_in ISO (PMID:18174455) UniProt PMID:18174455 NCBI chrNW_004955430:5,304,817...5,325,684
Ensembl chrNW_004955430:5,304,745...5,325,684 		JBrowse link
G Xbp1 X-box binding protein 1 involved_in ISO (PMID:11460154)
(MGI:5605956|PMID:12612580)		 UniProt PMID:11460154 PMID:12612580 MGI:5605956 NCBI chrNW_004955455:3,037,885...3,041,827 JBrowse link
G Zc3h12a zinc finger CCCH-type containing 12A involved_in ISO (PMID:25861989)
(MGI:3842851|PMID:19322177), (MGI:5142149|PMID:21616078), (MGI:5706859|PMID:26000482)
(PMID:18178554), (PMID:19909337), (PMID:22055188)		 UniProt PMID:18178554 PMID:19322177 PMID:19909337 PMID:21616078 PMID:22055188 More... MGI:3842851 MGI:5142149 MGI:5706859 NCBI chrNW_004955452:15,306,398...15,314,959
Ensembl chrNW_004955452:15,305,775...15,314,959 		JBrowse link
G Zfp36 ZFP36 ring finger protein involved_in ISO (PMID:14679154), (PMID:15187101)
(MGI:4457258|PMID:10330172), (MGI:5784995|PMID:11533235), (MGI:5784999|PMID:9703499)
(MGI:5795816|PMID:22844456)
(PMID:14766228)		 UniProt PMID:9703499 PMID:10330172 PMID:11533235 PMID:14679154 PMID:14766228 More... MGI:4457258 MGI:5784995 MGI:5784999 MGI:5795816 NCBI chrNW_004955468:152,744...155,140
Ensembl chrNW_004955468:152,744...155,140 		JBrowse link
lipopolysaccharide-mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt1 AKT serine/threonine kinase 1 acts_upstream_of_or_within ISO (PMID:24740015) MGI PMID:24740015 NCBI chrNW_004955538:3,208,711...3,224,386
Ensembl chrNW_004955538:3,208,710...3,229,904 		JBrowse link
G Bcl10 BCL10 immune signaling adaptor involved_in ISO (PMID:16831874) UniProt PMID:16831874 NCBI chrNW_004955423:8,710,231...8,720,530
Ensembl chrNW_004955423:8,709,890...8,722,050 		JBrowse link
G Cd180 CD180 molecule acts_upstream_of ISO (PMID:10880523) MGI PMID:10880523 NCBI chrNW_004955446:1,940,498...1,959,804
Ensembl chrNW_004955446:1,940,496...1,961,287 		JBrowse link
G Cd6 CD6 molecule involved_in ISO (PMID:17601777) UniProt PMID:17601777 NCBI chrNW_004955511:5,592,176...5,617,421 JBrowse link
G Irak1 interleukin 1 receptor associated kinase 1 involved_in
acts_upstream_of_or_within		 ISO (PMID:10383454)
(PMID:10549626), (PMID:12855817)		 BHF-UCL
MGI		 PMID:10383454 PMID:10549626 PMID:12855817 NCBI chrNW_004955580:663,651...668,622
Ensembl chrNW_004955580:661,609...668,622 		JBrowse link
G Irak2 interleukin 1 receptor associated kinase 2 acts_upstream_of_or_within ISO (PMID:15082713) MGI PMID:15082713 NCBI chrNW_004955561:1,585,842...1,650,268
Ensembl chrNW_004955561:1,585,827...1,653,197 		JBrowse link
G Irf3 interferon regulatory factor 3 acts_upstream_of_or_within ISO (PMID:12855817), (PMID:12872135) MGI PMID:12855817 PMID:12872135 NCBI chrNW_004955559:1,223,986...1,228,671
Ensembl chrNW_004955559:1,224,874...1,228,624 		JBrowse link
G Ly86 lymphocyte antigen 86 acts_upstream_of ISO (PMID:10880523) MGI PMID:10880523 NCBI chrNW_004955465:7,106,182...7,168,046
Ensembl chrNW_004955465:7,102,385...7,168,595 		JBrowse link
G Ly96 lymphocyte antigen 96 involved_in
acts_upstream_of		 ISO (MGI:5645195|PMID:24380872)
(PMID:10880523)		 UniProt
MGI		 PMID:10880523 PMID:24380872 MGI:5645195 NCBI chrNW_004955444:6,356,121...6,387,350
Ensembl chrNW_004955444:6,356,154...6,387,529 		JBrowse link
G Lyn LYN proto-oncogene, Src family tyrosine kinase involved_in ISO (MGI:4456928|PMID:20385881) UniProt PMID:20385881 MGI:4456928 NCBI chrNW_004955454:15,025,967...15,111,142
Ensembl chrNW_004955454:15,035,979...15,111,142 		JBrowse link
G Malt1 MALT1 paracaspase involved_in ISO (MGI:3694380|PMID:16831874) UniProt PMID:16831874 MGI:3694380 NCBI chrNW_004955402:42,919,480...42,968,873
Ensembl chrNW_004955402:42,911,649...42,972,429 		JBrowse link
G Mapk1 mitogen-activated protein kinase 1 acts_upstream_of_or_within ISO (PMID:12872135) MGI PMID:12872135 NCBI chrNW_004955442:17,284,232...17,380,026
Ensembl chrNW_004955442:17,284,232...17,380,020 		JBrowse link
G Mapk14 mitogen-activated protein kinase 14 acts_upstream_of_or_within ISO (PMID:12872135) MGI PMID:12872135 NCBI chrNW_004955437:3,836,331...3,884,083
Ensembl chrNW_004955437:3,838,232...3,884,083 		JBrowse link
G Mapk3 mitogen-activated protein kinase 3 acts_upstream_of_or_within ISO (PMID:12872135) MGI PMID:12872135 NCBI chrNW_004955493:6,870,699...6,876,836
Ensembl chrNW_004955493:6,869,668...6,879,152 		JBrowse link
G Mtdh metadherin involved_in ISO (PMID:19740331) UniProt PMID:19740331 NCBI chrNW_004955417:13,479,398...13,540,706
Ensembl chrNW_004955417:13,479,762...13,537,950 		JBrowse link
G Myd88 MYD88 innate immune signal transduction adaptor acts_upstream_of_or_within ISO (PMID:12855817) MGI PMID:12855817 NCBI chrNW_004955427:25,553,589...25,557,654
Ensembl chrNW_004955427:25,553,589...25,559,138 		JBrowse link
G Nfkbia NFKB inhibitor alpha acts_upstream_of_or_within ISO (PMID:12872135), (PMID:18261938) MGI PMID:12872135 PMID:18261938 NCBI chrNW_004955409:25,691,673...25,695,151
Ensembl chrNW_004955409:25,691,534...25,697,520 		JBrowse link
G Nos3 nitric oxide synthase 3 acts_upstream_of_or_within ISO (PMID:15647265) MGI PMID:15647265 NCBI chrNW_004955491:5,438,228...5,457,308
Ensembl chrNW_004955491:5,438,010...5,460,814 		JBrowse link
G Nr2c2 nuclear receptor subfamily 2 group C member 2 acts_upstream_of_or_within ISO (PMID:9851930) MGI PMID:9851930 NCBI chrNW_004955429:17,386,190...17,430,820
Ensembl chrNW_004955429:17,386,190...17,430,820 		JBrowse link
G Plcg2 phospholipase C gamma 2 involved_in ISO (PMID:32514138) ARUK-UCL PMID:32514138 NCBI chrNW_004955522:4,352,890...4,480,735
Ensembl chrNW_004955522:4,358,233...4,468,986 		JBrowse link
G Prkce protein kinase C epsilon involved_in
acts_upstream_of_or_within		 ISO (MGI:3652658|PMID:16757566)
(PMID:11696589)		 UniProt
MGI		 PMID:11696589 PMID:16757566 MGI:3652658 NCBI chrNW_004955441:12,642,703...13,142,396
Ensembl chrNW_004955441:12,642,697...13,139,372 		JBrowse link
G Ptpn22 protein tyrosine phosphatase non-receptor type 22 involved_in ISO (PMID:23991106) UniProt PMID:23991106 NCBI chrNW_004955435:17,082,762...17,139,067 JBrowse link
G Ripk2 receptor interacting serine/threonine kinase 2 acts_upstream_of_or_within ISO (PMID:11894098) MGI PMID:11894098 NCBI chrNW_004955417:6,669,675...6,698,142
Ensembl chrNW_004955417:6,669,675...6,702,228 		JBrowse link
G Spi1 Spi-1 proto-oncogene involved_in ISO (MGI:6459415|PMID:30718772) ARUK-UCL PMID:30718772 MGI:6459415 NCBI chrNW_004955422:873,735...886,560
Ensembl chrNW_004955422:873,735...886,560 		JBrowse link
G Stat1 signal transducer and activator of transcription 1 acts_upstream_of_or_within ISO (PMID:12872135) MGI PMID:12872135 NCBI chrNW_004955403:8,156,660...8,192,018
Ensembl chrNW_004955403:8,156,660...8,194,762 		JBrowse link
G Ticam1 toll like receptor adaptor molecule 1 acts_upstream_of_or_within ISO (PMID:12855817)
(PMID:12872135)		 MGI PMID:12855817 PMID:12872135 NCBI chrNW_004955495:4,197,083...4,204,999
Ensembl chrNW_004955495:4,202,372...4,204,513 		JBrowse link
G Tlr4 toll like receptor 4 involved_in
acts_upstream_of_or_within
NOT|acts_upstream_of_or_within		 ISO (MGI:5913054|PMID:28098138)
(PMID:10880523)		 UniProt
MGI		 PMID:10880523 PMID:28098138 MGI:5913054 NCBI chrNW_004955419:10,190,937...10,201,896
Ensembl chrNW_004955419:10,191,120...10,202,135 		JBrowse link
G Traf6 TNF receptor associated factor 6 acts_upstream_of_or_within ISO (PMID:26458771) MGI PMID:26458771 NCBI chrNW_004955422:9,925,765...9,950,354
Ensembl chrNW_004955422:9,932,680...9,949,100 		JBrowse link
negative regulation of lipopolysaccharide-mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cactin cactin, spliceosome C complex subunit involved_in ISO (PMID:20829348) UniProt PMID:20829348 NCBI chrNW_004955495:5,561,359...5,571,945
Ensembl chrNW_004955495:5,561,979...5,571,682 		JBrowse link
G Defb118 defensin beta 118 involved_in ISO (PMID:33181266) UniProt PMID:33181266 NCBI chrNW_004955422:29,554,310...29,560,660 JBrowse link
G Ltf lactotransferrin involved_in ISO (PMID:20345905) UniProt PMID:20345905 NCBI chrNW_004955420:25,580,449...25,604,277
Ensembl chrNW_004955420:25,580,359...25,604,331 		JBrowse link
G Nfkbil1 NFKB inhibitor like 1 involved_in ISO (PMID:20829348) UniProt PMID:20829348 NCBI chrNW_004955437:90,623...100,918
Ensembl chrNW_004955437:90,577...100,918 		JBrowse link
G Prdx2 peroxiredoxin 2 acts_upstream_of_or_within ISO (PMID:17325201) MGI PMID:17325201 NCBI chrNW_004955415:31,880,801...31,884,453
Ensembl chrNW_004955415:31,880,588...31,884,778 		JBrowse link
G Trib1 tribbles pseudokinase 1 involved_in ISO (PMID:17452330) BHF-UCL PMID:17452330 NCBI chrNW_004955461:494,003...501,928
Ensembl chrNW_004955461:494,003...501,990 		JBrowse link
positive regulation of lipopolysaccharide-mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp6 bone morphogenetic protein 6 involved_in ISO (MGI:4352622|PMID:19252488) BHF-UCL PMID:19252488 MGI:4352622 NCBI chrNW_004955465:6,053,600...6,201,254
Ensembl chrNW_004955465:6,054,931...6,200,377 		JBrowse link
G Cd14 CD14 molecule involved_in ISO (MGI:5645195|PMID:24380872) UniProt PMID:24380872 MGI:5645195 NCBI chrNW_004955418:73,736...75,345
Ensembl chrNW_004955418:73,897...75,224 		JBrowse link
G Cd180 CD180 molecule acts_upstream_of_or_within ISO (PMID:10880523) MGI PMID:10880523 NCBI chrNW_004955446:1,940,498...1,959,804
Ensembl chrNW_004955446:1,940,496...1,961,287 		JBrowse link
G Ly86 lymphocyte antigen 86 acts_upstream_of_or_within ISO (PMID:10880523) MGI PMID:10880523 NCBI chrNW_004955465:7,106,182...7,168,046
Ensembl chrNW_004955465:7,102,385...7,168,595 		JBrowse link
G Ly96 lymphocyte antigen 96 acts_upstream_of_or_within ISO (PMID:10880523) MGI PMID:10880523 NCBI chrNW_004955444:6,356,121...6,387,350
Ensembl chrNW_004955444:6,356,154...6,387,529 		JBrowse link
G Mif macrophage migration inhibitory factor involved_in ISO (MGI:2156302|PMID:11756671) BHF-UCL PMID:11756671 MGI:2156302 NCBI chrNW_004955455:8,367,566...8,368,460
Ensembl chrNW_004955455:8,367,566...8,368,460 		JBrowse link
G Prkca protein kinase C alpha involved_in ISO (PMID:9830023) UniProt PMID:9830023 NCBI chrNW_004955478:5,686,639...6,090,356
Ensembl chrNW_004955478:5,686,640...6,083,967 		JBrowse link
G Sash1 SAM and SH3 domain containing 1 acts_upstream_of_or_within ISO (PMID:23776175) MGI PMID:23776175 NCBI chrNW_004955439:12,551,361...12,729,500
Ensembl chrNW_004955439:12,550,273...12,839,896 		JBrowse link
G Scimp SLP adaptor and CSK interacting membrane protein involved_in ISO (MGI:5913054|PMID:28098138) UniProt PMID:28098138 MGI:5913054 NCBI chrNW_004955467:10,547,706...10,578,355
Ensembl chrNW_004955467:10,547,294...10,578,387 		JBrowse link
G Traf6 TNF receptor associated factor 6 involved_in ISO (MGI:1335941|PMID:10215628) UniProt PMID:10215628 MGI:1335941 NCBI chrNW_004955422:9,925,765...9,950,354
Ensembl chrNW_004955422:9,932,680...9,949,100 		JBrowse link
regulation of lipopolysaccharide-mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd55 CD55 molecule (Cromer blood group) involved_in ISO (PMID:12731067) UniProt PMID:12731067 NCBI chrNW_004955406:42,773,368...42,796,205 JBrowse link
G Cd84 CD84 molecule involved_in ISO (MGI:5700297|PMID:20628063) UniProt PMID:20628063 MGI:5700297 NCBI chrNW_004955468:12,280,467...12,313,976
Ensembl chrNW_004955468:12,281,686...12,313,912 		JBrowse link
G Cx3cl1 C-X3-C motif chemokine ligand 1 involved_in ISO (PMID:10652441) ARUK-UCL PMID:10652441 NCBI chrNW_004955433:15,023,272...15,034,650
Ensembl chrNW_004955433:15,023,050...15,034,711 		JBrowse link
G Tut4 terminal uridylyl transferase 4 acts_upstream_of_or_within ISO (PMID:16643855) MGI PMID:16643855 NCBI chrNW_004955464:6,610,350...6,734,606
Ensembl chrNW_004955464:6,646,245...6,734,066 		JBrowse link
tolerance induction to lipopolysaccharide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acod1 aconitate decarboxylase 1 involved_in ISO (PMID:23609450)
(MGI:5490396|PMID:23609450)		 UniProt PMID:23609450 MGI:5490396 NCBI chrNW_004955404:30,254,934...30,266,898
Ensembl chrNW_004955404:30,254,841...30,270,921 		JBrowse link
G Tnfaip3 TNF alpha induced protein 3 involved_in ISO (PMID:21220427) BHF-UCL PMID:21220427 NCBI chrNW_004955436:21,566,591...21,581,551
Ensembl chrNW_004955436:21,566,423...21,578,469 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12360
    cellular process 11484
      cellular response to stimulus 5386
        cellular response to biotic stimulus 250
          cellular response to molecule of bacterial origin 224
            cellular response to lipopolysaccharide 215
              lipopolysaccharide-mediated signaling pathway + 46
              tolerance induction to lipopolysaccharide 2
Path 2
Term Annotations click to browse term
  biological_process 12360
    response to stimulus 6685
      response to external stimulus 2006
        response to external biotic stimulus 1246
          response to other organism 1243
            response to bacterium 652
              response to molecule of bacterial origin 421
                cellular response to molecule of bacterial origin 224
                  cellular response to lipopolysaccharide 215
                    lipopolysaccharide-mediated signaling pathway + 46
                    tolerance induction to lipopolysaccharide 2
paths to the root