Casp7 (caspase 7) - Rat Genome Database

Name: Casp7
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: Casp7 (caspase 7) Chinchilla lanigera

Analyze

Symbol:

Casp7

Name:

caspase 7

RGD ID:

8914022

Description:

ENCODES a protein that exhibits aspartic-type endopeptidase activity (ortholog); cysteine-type endopeptidase activity (ortholog); cysteine-type endopeptidase activity involved in apoptotic process (ortholog); INVOLVED IN apoptotic process (ortholog); cellular response to lipopolysaccharide (ortholog); cellular response to staurosporine (ortholog); PARTICIPATES IN extrinsic apoptotic pathway; FasL mediated signaling pathway; glutathione metabolic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); acute myocardial infarction (ortholog); Alzheimer's disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); extracellular space (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

caspase 7, apoptosis-related cysteine peptidase; caspase-7

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	CASP7 (caspase 7)	NCBI	Ortholog
Mus musculus (house mouse):	Casp7 (caspase 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Casp7 (caspase 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	CASP7 (caspase 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	CASP7 (caspase 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Casp7 (caspase 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	CASP7 (caspase 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	CASP7 (caspase 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Casp7 (caspase 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

ChiLan1.0 - Chinchilla ChiLan1.0 Assembly

Position:

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955431	18,686,190 - 18,723,524 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955431	18,685,408 - 18,723,221 (+)	NCBI	ChiLan1.0	ChiLan1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

acute myeloid leukemia (ISO)

acute myocardial infarction (ISO)

Alzheimer's disease (ISO)

breast cancer (ISO)

Breast Neoplasms (ISO)

chemical colitis (ISO)

colon cancer (ISO)

Diabetic Nephropathies (ISO)

endometritis (ISO)

Endotoxemia (ISO)

Experimental Liver Cirrhosis (ISO)

Experimental Mammary Neoplasms (ISO)

genetic disease (ISO)

Kidney Reperfusion Injury (ISO)

Lung Neoplasms (ISO)

lung non-small cell carcinoma (ISO)

Myocardial Reperfusion Injury (ISO)

Osteoarthritis, Experimental (ISO)

Retina Reperfusion Injury (ISO)

retinitis pigmentosa (ISO)

rheumatoid arthritis (ISO)

sciatic neuropathy (ISO)

Spinocerebellar Ataxias (ISO)

transient cerebral ischemia (ISO)

type 2 diabetes mellitus (ISO)

ureteral obstruction (ISO)

vitiligo (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

apoptotic process (ISO)

cellular response to lipopolysaccharide (ISO)

cellular response to staurosporine (ISO)

defense response to bacterium (ISO)

execution phase of apoptosis (ISO)

fibroblast apoptotic process (ISO)

heart development (ISO)

leukocyte apoptotic process (ISO)

lymphocyte apoptotic process (ISO)

neuron apoptotic process (ISO)

positive regulation of plasma membrane repair (ISO)

protein catabolic process (ISO)

protein maturation (ISO)

protein processing (ISO)

proteolysis (ISO)

response to UV (ISO)

striated muscle cell differentiation (ISO)

Cellular Component

cytoplasm (ISO)

cytosol (ISO)

extracellular space (ISO)

nucleus (ISO)

Molecular Function

aspartic-type endopeptidase activity (ISO)

cysteine-type endopeptidase activity (ISO)

cysteine-type endopeptidase activity involved in apoptotic process (ISO)

cysteine-type endopeptidase activity involved in execution phase of apoptosis (ISO)

cysteine-type peptidase activity (ISO)

peptidase activity (ISO)

protein binding (ISO)

RNA binding (ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

extrinsic apoptotic pathway (ISO)

FasL mediated signaling pathway (ISO)

glutathione metabolic pathway (ISO)

glutathione synthase deficiency pathway (ISO)

glutathionuria disease pathway (ISO)

intrinsic apoptotic pathway (ISO)

Trail mediated signaling pathway (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Transitive Annotation Pipeline	Automated assignment of GO, PW and RDO ISO annotations across species

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

Casp7
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955431	18,686,190 - 18,723,524 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955431	18,685,408 - 18,723,221 (+)	NCBI	ChiLan1.0	ChiLan1.0

CASP7
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	10	113,679,194 - 113,730,909 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	10	113,679,162 - 113,730,907 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	10	115,438,953 - 115,490,668 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	10	115,428,925 - 115,480,654 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	10	115,428,952 - 115,480,652	NCBI
Celera	10	109,166,297 - 109,218,022 (+)	NCBI		Celera
Cytogenetic Map	10	q25.3	NCBI
HuRef	10	109,065,803 - 109,118,487 (+)	NCBI		HuRef
CHM1_1	10	115,720,952 - 115,772,694 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	10	114,571,036 - 114,622,770 (+)	NCBI		T2T-CHM13v2.0

Casp7
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	19	56,382,640 - 56,430,780 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	19	56,385,561 - 56,430,776 (+)	Ensembl		GRCm39 Ensembl
GRCm38	19	56,396,833 - 56,442,348 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	19	56,397,129 - 56,442,344 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	19	56,471,619 - 56,516,834 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	19	56,450,379 - 56,495,594 (+)	NCBI		MGSCv36	mm8
Celera	19	58,584,433 - 58,629,610 (+)	NCBI		Celera
Cytogenetic Map	19	D2	NCBI
cM Map	19	51.84	NCBI

Casp7
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	265,442,647 - 265,481,938 (+)	NCBI		GRCr8
mRatBN7.2	1	255,437,438 - 255,476,737 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	255,437,172 - 255,476,729 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	263,654,318 - 263,686,579 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	270,360,357 - 270,392,618 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	263,006,435 - 263,038,671 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	277,190,557 - 277,242,779 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	277,190,964 - 277,242,774 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	284,572,208 - 284,623,736 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	262,689,300 - 262,721,591 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	1	262,900,344 - 262,932,633 (+)	NCBI
Celera	1	251,144,026 - 251,176,065 (+)	NCBI		Celera
Cytogenetic Map	1	q55	NCBI

CASP7
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	8	125,557,882 - 125,609,366 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	10	125,563,218 - 125,614,702 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	10	110,273,318 - 110,324,800 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	10	113,707,188 - 113,758,630 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	10	113,707,780 - 113,758,626 (+)	Ensembl	panpan1.1		panPan2

CASP7
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	28	24,599,866 - 24,630,018 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	28	24,599,493 - 24,628,668 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	28	24,751,150 - 24,781,371 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	28	25,131,618 - 25,161,826 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	28	25,131,720 - 25,161,823 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	28	24,688,961 - 24,719,167 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	28	24,696,885 - 24,727,323 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	28	24,896,252 - 24,926,727 (+)	NCBI		UU_Cfam_GSD_1.0

Casp7
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024407213	21,446,342 - 21,478,385 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936486	4,088,372 - 4,114,955 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936486	4,082,664 - 4,114,942 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CASP7
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	14	124,019,164 - 124,050,365 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	14	124,017,776 - 124,050,369 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

CASP7
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	9	106,558,291 - 106,607,662 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	9	106,559,445 - 106,607,663 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666048	67,773,257 - 67,822,203 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Casp7
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624737	32,852,835 - 32,887,069 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624737	32,853,354 - 32,888,881 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005387788	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005387789	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005387790	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005387791	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005387792	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013515832	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AGCD01030432	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01030433	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBDF01253111	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCLAT00000010083 ⟹ ENSCLAP00000009953

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955431	18,686,190 - 18,723,524 (+)	Ensembl

RefSeq Acc Id:

XM_005387788 ⟹ XP_005387845

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955431	18,685,408 - 18,723,221 (+)	NCBI

Sequence:

show sequence

TGCGCCCGCGCGAGAGGAAGCCACATCCGGGACGCCAGGACCCCAGCGACCGCGCCGCTGGCCG
AGAGCCCGGCCTTGGGGAAGATGGCAGATGATCGGGAATATGTTGGAGAGCAGGGAGCTGGTGA
GTCTGCAAGTACAGATGCAGTTGATGCTAAGCCAGACCGGATCTCGTTTGTGTCAGCACTCCTA
AAGAAGAAGAAGAATGGCACCACACGCTCAGCCAGCACTCCTGAGGGCGAGGTGCCTACCTATA
AGTATAACATGAACTTTGAGAAGGTGGGCAAGTGCATCATAATAAACAACAAGAACTTCGACAA
AGTGACAGGCATGGGCATCCGAAATGGAACGGACAAAGATGCTGCAGCCCTTTTCAAGTGCTTC
CGTAGCCTGGGTTTTGACGTGGTTGTTCATAATGACTGCACCTGTGCCAAGATGCAAGATCTGC
TTAAACGAGCTTCTGAGGAAGACCATACGAATTCAGCCTGCTTCGCCTGCATCTTGTTAAGCCA
TGGAGAAGAAAATTGTATTTATGGAAGAGATGGTGTGACACCAATAAAGGATTTGACGGTCCAC
TTTCGGGGTGATCGATGCAAAACCCTTTTAGAGAAACCCAAACTCTTTTTCATTCAGGCTTGCC
GAGGCACGGAGCTTGATGATGGGGTCCAGGCTGACTCGGGGCCCATCAGTGACACCGATGCTAG
CCCCCGCTATAAGGTCCCGGTCGAAGCTGACTTTCTCTTCGCTTACTCCACGGTCCCAGGCTAT
TACTCTTGGAGGAACCCAGGAAGAGGTTCCTGGTTTGTGCAGGCTCTCTGCTCCATCCTGGAGG
AACATGGCAAAGAGCTGGAGCTCATGCAGATCCTTACTAGGGTGAACTACAGAGTAGCCAGACA
CTTTGAGTCCCAGTCGGATGACCCTCATTTCAACGAGAAGAAGCAGATCCCATGTGTGGTCTCC
ATGCTCACCAAAGAACTGCACTTCCGCAAGTAACCGTTCCTGCTGGCTGAGAAGCCAGGGATTG
CTTGTGGATGAGTCAGATCGTTAGTATCATTATTATTACTATTTTATTTTTATTATTATTATTA
TTATGATGCTCTTGAAATACCCAGAAATGTTACGAGATTTTAATTTCAGGAAAATGTATTGATT
CAGCAGGGAAGAAACATTCTGGTGCTGACGGATGGTCTCCGAATTTTCAGAGACTTCTTTTTTA
CAATGTTACTCATTTGATGACTTTGTAATTTCCTCTTAAGGTTAATTTTTCTGTTTGTATTTCT
TTTACTTTGTTCATTGCACTCAGTACACGCAACAGAAATGACCTCTGGAGAAAGTTCTCAGCCA
TGTCCACTGGAATTAATGGTGACATTGGTGGAATAGGGTTCTGTTTGCACTTGGAACAATAAAT
CTCGGCCCTTGACAAAAAATAGCTGAAGAGATAGACGCTGGCCTGTGTTGCAGAAATGGGATTG
TATGCTCTGAGTGATTTTTCGTTGGTTTAGGGCAGATTTTTATGCAAGCCTTGCCAGGTAAGAG
AGGAGAAAAAAAATCTGATGACTCTAGTATGTATCAGTGAGGGTTCAGTCCCCAAACCGGAAGT
TATTCTAGGTGTTAGTATAGGAAATTAAGTTAATAGAAGATAAAGTAATGAAGCCAAACAGCAG
AAGACTGTTACCACACCTGGGACTTGAGGACAGTCGGAAGAGGTGTGGCTTCCTGGGGCAGAGG
CTGGGATCAGCCACAGAAACTGGGATGCCAGTGGGGACTCCCTGCTGGGAGCTGGGAGCATTGA
GGGGCTGTGGAAAATGGAGCCGTGGCTGAGGCAAAGCCACTGGCTGAGATGGTGACAGTGCCAG
AGCTGAGTCAGACACCGAGAAACCCCCTGGCCTGCGTCTCCTGTCCTATGTCTTCCACCAGCAT
CTGACCATTCCATCCTGGAAGCTAGCTGGCCAGAACCCTGGGAGATGTGGCTTCCTCTGATACA
GCGTGCAGAGCAGGGGATAGTGAGGCCACAGAACAGCAAAGAGTGGATAGAAGCCTGGCCTATA
ATGTGAACATATTCCTTGGTGTTCAGCAGTTCATCCAAACATGTATTCATTAAGTTGTCAGATA
GTCTACCTATGTGCAAAAAAATGTTTCTGCTTTATGTGCAAGATGGTCTGTGATAGCTTTAAAA
TCTACTTAGAAGTTTTCAAATTATTCCAGATATTATTCTCAGTAAATTTTTTTGTTACCTCTAA
TTTTGTGAGGAAGTTTATAGCGAAGATTTGGGGCACTTTGTTTTCAGGATGGTAATATCTTTTG
AATTCTTTATATATTACTGTATTTTCCTGCCTAATAACTGGTTAACACATGTTCACATTTATTG
ATTAAAATGTGACTGCTTAATTCCTAA

hide sequence

RefSeq Acc Id:

XM_005387789 ⟹ XP_005387846

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955431	18,686,186 - 18,723,221 (+)	NCBI

Sequence:

show sequence

CAAGGCGGCCCTCGGACCGTAGTTGCAGAGGGACGGAGATCGCCGCGAGGTCTGGCCGCTCAGG
CAGCGTGGGAACGGCTGTCTCCTGCTTCCGATTCTGGATACCCAGACCTCTTCAGTACTGCTGC
CCCTAGGTTTATGGTCCACCTCTGCTACCTGTAAACAGTGTGGTGTTAGATGGCAGATGATCGG
GAATATGTTGGAGAGCAGGGAGCTGGTGAGTCTGCAAGTACAGATGCAGTTGATGCTAAGCCAG
ACCGGATCTCGTTTGTGTCAGCACTCCTAAAGAAGAAGAAGAATGGCACCACACGCTCAGCCAG
CACTCCTGAGGGCGAGGTGCCTACCTATAAGTATAACATGAACTTTGAGAAGGTGGGCAAGTGC
ATCATAATAAACAACAAGAACTTCGACAAAGTGACAGGCATGGGCATCCGAAATGGAACGGACA
AAGATGCTGCAGCCCTTTTCAAGTGCTTCCGTAGCCTGGGTTTTGACGTGGTTGTTCATAATGA
CTGCACCTGTGCCAAGATGCAAGATCTGCTTAAACGAGCTTCTGAGGAAGACCATACGAATTCA
GCCTGCTTCGCCTGCATCTTGTTAAGCCATGGAGAAGAAAATTGTATTTATGGAAGAGATGGTG
TGACACCAATAAAGGATTTGACGGTCCACTTTCGGGGTGATCGATGCAAAACCCTTTTAGAGAA
ACCCAAACTCTTTTTCATTCAGGCTTGCCGAGGCACGGAGCTTGATGATGGGGTCCAGGCTGAC
TCGGGGCCCATCAGTGACACCGATGCTAGCCCCCGCTATAAGGTCCCGGTCGAAGCTGACTTTC
TCTTCGCTTACTCCACGGTCCCAGGCTATTACTCTTGGAGGAACCCAGGAAGAGGTTCCTGGTT
TGTGCAGGCTCTCTGCTCCATCCTGGAGGAACATGGCAAAGAGCTGGAGCTCATGCAGATCCTT
ACTAGGGTGAACTACAGAGTAGCCAGACACTTTGAGTCCCAGTCGGATGACCCTCATTTCAACG
AGAAGAAGCAGATCCCATGTGTGGTCTCCATGCTCACCAAAGAACTGCACTTCCGCAAGTAACC
GTTCCTGCTGGCTGAGAAGCCAGGGATTGCTTGTGGATGAGTCAGATCGTTAGTATCATTATTA
TTACTATTTTATTTTTATTATTATTATTATTATGATGCTCTTGAAATACCCAGAAATGTTACGA
GATTTTAATTTCAGGAAAATGTATTGATTCAGCAGGGAAGAAACATTCTGGTGCTGACGGATGG
TCTCCGAATTTTCAGAGACTTCTTTTTTACAATGTTACTCATTTGATGACTTTGTAATTTCCTC
TTAAGGTTAATTTTTCTGTTTGTATTTCTTTTACTTTGTTCATTGCACTCAGTACACGCAACAG
AAATGACCTCTGGAGAAAGTTCTCAGCCATGTCCACTGGAATTAATGGTGACATTGGTGGAATA
GGGTTCTGTTTGCACTTGGAACAATAAATCTCGGCCCTTGACAAAAAATAGCTGAAGAGATAGA
CGCTGGCCTGTGTTGCAGAAATGGGATTGTATGCTCTGAGTGATTTTTCGTTGGTTTAGGGCAG
ATTTTTATGCAAGCCTTGCCAGGTAAGAGAGGAGAAAAAAAATCTGATGACTCTAGTATGTATC
AGTGAGGGTTCAGTCCCCAAACCGGAAGTTATTCTAGGTGTTAGTATAGGAAATTAAGTTAATA
GAAGATAAAGTAATGAAGCCAAACAGCAGAAGACTGTTACCACACCTGGGACTTGAGGACAGTC
GGAAGAGGTGTGGCTTCCTGGGGCAGAGGCTGGGATCAGCCACAGAAACTGGGATGCCAGTGGG
GACTCCCTGCTGGGAGCTGGGAGCATTGAGGGGCTGTGGAAAATGGAGCCGTGGCTGAGGCAAA
GCCACTGGCTGAGATGGTGACAGTGCCAGAGCTGAGTCAGACACCGAGAAACCCCCTGGCCTGC
GTCTCCTGTCCTATGTCTTCCACCAGCATCTGACCATTCCATCCTGGAAGCTAGCTGGCCAGAA
CCCTGGGAGATGTGGCTTCCTCTGATACAGCGTGCAGAGCAGGGGATAGTGAGGCCACAGAACA
GCAAAGAGTGGATAGAAGCCTGGCCTATAATGTGAACATATTCCTTGGTGTTCAGCAGTTCATC
CAAACATGTATTCATTAAGTTGTCAGATAGTCTACCTATGTGCAAAAAAATGTTTCTGCTTTAT
GTGCAAGATGGTCTGTGATAGCTTTAAAATCTACTTAGAAGTTTTCAAATTATTCCAGATATTA
TTCTCAGTAAATTTTTTTGTTACCTCTAATTTTGTGAGGAAGTTTATAGCGAAGATTTGGGGCA
CTTTGTTTTCAGGATGGTAATATCTTTTGAATTCTTTATATATTACTGTATTTTCCTGCCTAAT
AACTGGTTAACACATGTTCACATTTATTGATTAAAATGTGACTGCTTAATTCCTAA

hide sequence

RefSeq Acc Id:

XM_005387790 ⟹ XP_005387847

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955431	18,705,059 - 18,723,221 (+)	NCBI

Sequence:

show sequence

AAGTGAGTGAGTTGGCCCTGTGCTGTGAAATTTGAGGTCGGGAGACGTGATTGTCTACCTAAGA
CGCTAGGATGATCTGGTTCCTTCCTGCTCTTGCTTGCTGGCACTGTGTTGCTGCGGAGACTTGA
GCTTCTCTGAATGCGTCTGGAGAGTGAAGATGATGGGACTTGGCCACTTCGGAAACACCACACT
GAAGAACAGAAGAAGAAGAATGGCACCACACGCTCAGCCAGCACTCCTGAGGGCGAGGTGCCTA
CCTATAAGTATAACATGAACTTTGAGAAGGTGGGCAAGTGCATCATAATAAACAACAAGAACTT
CGACAAAGTGACAGGCATGGGCATCCGAAATGGAACGGACAAAGATGCTGCAGCCCTTTTCAAG
TGCTTCCGTAGCCTGGGTTTTGACGTGGTTGTTCATAATGACTGCACCTGTGCCAAGATGCAAG
ATCTGCTTAAACGAGCTTCTGAGGAAGACCATACGAATTCAGCCTGCTTCGCCTGCATCTTGTT
AAGCCATGGAGAAGAAAATTGTATTTATGGAAGAGATGGTGTGACACCAATAAAGGATTTGACG
GTCCACTTTCGGGGTGATCGATGCAAAACCCTTTTAGAGAAACCCAAACTCTTTTTCATTCAGG
CTTGCCGAGGCACGGAGCTTGATGATGGGGTCCAGGCTGACTCGGGGCCCATCAGTGACACCGA
TGCTAGCCCCCGCTATAAGGTCCCGGTCGAAGCTGACTTTCTCTTCGCTTACTCCACGGTCCCA
GGCTATTACTCTTGGAGGAACCCAGGAAGAGGTTCCTGGTTTGTGCAGGCTCTCTGCTCCATCC
TGGAGGAACATGGCAAAGAGCTGGAGCTCATGCAGATCCTTACTAGGGTGAACTACAGAGTAGC
CAGACACTTTGAGTCCCAGTCGGATGACCCTCATTTCAACGAGAAGAAGCAGATCCCATGTGTG
GTCTCCATGCTCACCAAAGAACTGCACTTCCGCAAGTAACCGTTCCTGCTGGCTGAGAAGCCAG
GGATTGCTTGTGGATGAGTCAGATCGTTAGTATCATTATTATTACTATTTTATTTTTATTATTA
TTATTATTATGATGCTCTTGAAATACCCAGAAATGTTACGAGATTTTAATTTCAGGAAAATGTA
TTGATTCAGCAGGGAAGAAACATTCTGGTGCTGACGGATGGTCTCCGAATTTTCAGAGACTTCT
TTTTTACAATGTTACTCATTTGATGACTTTGTAATTTCCTCTTAAGGTTAATTTTTCTGTTTGT
ATTTCTTTTACTTTGTTCATTGCACTCAGTACACGCAACAGAAATGACCTCTGGAGAAAGTTCT
CAGCCATGTCCACTGGAATTAATGGTGACATTGGTGGAATAGGGTTCTGTTTGCACTTGGAACA
ATAAATCTCGGCCCTTGACAAAAAATAGCTGAAGAGATAGACGCTGGCCTGTGTTGCAGAAATG
GGATTGTATGCTCTGAGTGATTTTTCGTTGGTTTAGGGCAGATTTTTATGCAAGCCTTGCCAGG
TAAGAGAGGAGAAAAAAAATCTGATGACTCTAGTATGTATCAGTGAGGGTTCAGTCCCCAAACC
GGAAGTTATTCTAGGTGTTAGTATAGGAAATTAAGTTAATAGAAGATAAAGTAATGAAGCCAAA
CAGCAGAAGACTGTTACCACACCTGGGACTTGAGGACAGTCGGAAGAGGTGTGGCTTCCTGGGG
CAGAGGCTGGGATCAGCCACAGAAACTGGGATGCCAGTGGGGACTCCCTGCTGGGAGCTGGGAG
CATTGAGGGGCTGTGGAAAATGGAGCCGTGGCTGAGGCAAAGCCACTGGCTGAGATGGTGACAG
TGCCAGAGCTGAGTCAGACACCGAGAAACCCCCTGGCCTGCGTCTCCTGTCCTATGTCTTCCAC
CAGCATCTGACCATTCCATCCTGGAAGCTAGCTGGCCAGAACCCTGGGAGATGTGGCTTCCTCT
GATACAGCGTGCAGAGCAGGGGATAGTGAGGCCACAGAACAGCAAAGAGTGGATAGAAGCCTGG
CCTATAATGTGAACATATTCCTTGGTGTTCAGCAGTTCATCCAAACATGTATTCATTAAGTTGT
CAGATAGTCTACCTATGTGCAAAAAAATGTTTCTGCTTTATGTGCAAGATGGTCTGTGATAGCT
TTAAAATCTACTTAGAAGTTTTCAAATTATTCCAGATATTATTCTCAGTAAATTTTTTTGTTAC
CTCTAATTTTGTGAGGAAGTTTATAGCGAAGATTTGGGGCACTTTGTTTTCAGGATGGTAATAT
CTTTTGAATTCTTTATATATTACTGTATTTTCCTGCCTAATAACTGGTTAACACATGTTCACAT
TTATTGATTAAAATGTGACTGCTTAATTCCTAA

hide sequence

RefSeq Acc Id:

XM_005387791 ⟹ XP_005387848

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955431	18,705,277 - 18,723,221 (+)	NCBI

Sequence:

show sequence

TGCCGCCTTAGCTCCGTGCATCTGCTTCCCCTTGCTTTTTAGAGCACACTTAAGTGCCCTTCGT
AAGTCATTCTTCCAGGATATTGGAGTTCGCTGTGATCCTGCTTGTCAAGCCCTAAGCACAGTGA
TTTAGTGGCCGGATTTATATTTTTTAAATCTGCAGCCAATTGTGGAACACGCAAGCTTTTAAGA
GGATTTAGAACTTCTAATTCACTGGTCTGATTTATCATGGGCTTTGCACTTAACAGCAGCTTCC
AAAACAAGAATCCCGTGTTTCTTGTCAGCACAGTCATCTTGGAGAAGGCTTTCTGAGTGTAGAA
AGGGCCAAGACAAAGGCTGGGTTTATCAGCAGAGAATTAGAGGAAAGAACGAAGAGGGAGACGA
GAGGAGGAAACGGGACGTGGGGAGAACCTGATTGTAAAAATGCCCCGAGCAGCTCTGTGTTTAT
GTGTCTTTGCCTCGAACCTGTATTTCGCAGAACCCATGGCGTCAAAACTGTTAATTCACTTTGT
AAAACCCAGGACTGTAACAGGATTTGTACTTCTTTGTGCTGACTTAGATACCGGAAGTGGTTTT
TCTACCATTTGTCAGATTCAGAGAAAGACTGTCATCCCCTGATCCCGAATTGAGAGATGCTCAG
TGAGCTTCTCTTTGTGCCTCTTAGGGTCTGCGTGCCCGTGCTTACATGTTCCTGCCACTTCTGC
AGAAAGCTCAGACGAACCTGGGGCAACCAGAAAAGCCCGTGTTAGAAAGTCTGTCTTGGGATCA
TGGCCAGCTGAAGCAACTTCTAATCTGGTCTTGGAAAACTCCTTATTTCCCTTCTTATACCCCC
AACACACACACCACATACACATACACACACACACACGCACACACACGCCACACACCCACATGCC
ACACACTGCCGCCAGCAGGACTGCCATCTTTCCGCTGTGGGCTGACTGATTAGCACAGCCTCCC
CAGGCTCTTGAGGCCCTTTCTTCTGCTCCACAGCAGTTGTTTATCTGATGATCTTGGCTCCAGC
CTGTGATTTCCAAACAGACGATAACTCTTTTTCCACTGCTGTGACGGGGCACAAAGCGTAGCTT
CTCCAACTGAGCCCAAAGGGAGTTTCTGCTCACACCAAGGGAACCCTGACAGTGTGTTACAAAC
ACCGGGGCCTCTCCCACAGCATCATCTGCAGTGGCAGCTCCTAGAGCTTTTGGTGGTGGTGGTA
AAATAGCAGCTCAGCCGTCAGTGCCTAGAAACCTCATGCAGAGTCTTAAATCTGACCTGTGACT
CTAAAGACACCACGCTGCTGATGGAAGTGACCTGTCACACCCGCCTTAGCACCTCTCTTTCCAG
GGGCCGAGTCTGGAGATAGCCTGCAGAAATGGTATCTCTCGAGGGGCAGGGAAAAAAGGAAGAA
CAGGTCATCAGCCTTGGGCCTCAGGTGGCTGTGGGAGAGGATGTATTGTTGTCTGTTACCTCTT
TTCATGCTTCAGTGATACTTTGGTCCATGTCACTGATCTTTCTGCCAAGGACACTGTCTGTTGT
GTGACTGGTGGAGTGAAGGGAAAGGCTGATCCAGATGAATCCTCCCCATATGCTGCCATGTTGG
TTTCCTAGGATGTGGTTCAGGGGTGCAGGGAGTTGATCATCACCACCCTACATATCAAACTCTG
GGCCACAGGAAGAAACAGGACTAAGACCCCTGGACCTGGTGTCCAGTCAGCCCGCGGAGCCATT
GCTCGCTTGGGTAAGAAGATTGTGAGGACTGAGAATGTCAACCCCCCATCCCCTTTGACAGCAC
CCAAGGAAAGGATGTTGCCATGGTTGCAGTCTACAAACAAGACTCAAGTTATTCTCTGTTAGAA
AATAACTTATAACGCACTGTCAGGGTCCCCTTGATGTGGGCAGTAATTTGTACAAATTGCTTTT
GTGTCAGCTGAAAAGGAAAAAGAGAAAAAAACTGCCAACTGCTGCTAAGCAGCACCTCCCAGAA
AGCCGTGCTTCCTGCAGCACAGCAGGTTGGACCTTCTGGCCTGGAGCCGAGGAGCCATAGGCTG
AGGGCATTGGAGAGGTGATGATGTGGCAGAGACAGCAGGACAAGGTCGGAGGCCATGCCATGGG
CAGACGGGCTGGGGTGAAGAACAGCCCAGATGCTAGGAGAACAGCCTGGCCTGGCCGACTCATT
CTCTGAGAGGTGAAAGGTGAGAACTGTGAAACGGGAGACTTAGCGTCAGACTTCGGAAGTAATC
TGGGCTTTGTTCGTTTCTAGCTTGTGCTCATGGACCGTCCAGTTTAATCTCTATGAAGTGGAGC
TAGTGGCTCACAGAATTGTACAGATTAAATGACATAATACCGTGTATGCGACGCGGAAGAAGAA
GAATGGCACCACACGCTCAGCCAGCACTCCTGAGGGCGAGGTGCCTACCTATAAGTATAACATG
AACTTTGAGAAGGTGGGCAAGTGCATCATAATAAACAACAAGAACTTCGACAAAGTGACAGGCA
TGGGCATCCGAAATGGAACGGACAAAGATGCTGCAGCCCTTTTCAAGTGCTTCCGTAGCCTGGG
TTTTGACGTGGTTGTTCATAATGACTGCACCTGTGCCAAGATGCAAGATCTGCTTAAACGAGCT
TCTGAGGAAGACCATACGAATTCAGCCTGCTTCGCCTGCATCTTGTTAAGCCATGGAGAAGAAA
ATTGTATTTATGGAAGAGATGGTGTGACACCAATAAAGGATTTGACGGTCCACTTTCGGGGTGA
TCGATGCAAAACCCTTTTAGAGAAACCCAAACTCTTTTTCATTCAGGCTTGCCGAGGCACGGAG
CTTGATGATGGGGTCCAGGCTGACTCGGGGCCCATCAGTGACACCGATGCTAGCCCCCGCTATA
AGGTCCCGGTCGAAGCTGACTTTCTCTTCGCTTACTCCACGGTCCCAGGCTATTACTCTTGGAG
GAACCCAGGAAGAGGTTCCTGGTTTGTGCAGGCTCTCTGCTCCATCCTGGAGGAACATGGCAAA
GAGCTGGAGCTCATGCAGATCCTTACTAGGGTGAACTACAGAGTAGCCAGACACTTTGAGTCCC
AGTCGGATGACCCTCATTTCAACGAGAAGAAGCAGATCCCATGTGTGGTCTCCATGCTCACCAA
AGAACTGCACTTCCGCAAGTAACCGTTCCTGCTGGCTGAGAAGCCAGGGATTGCTTGTGGATGA
GTCAGATCGTTAGTATCATTATTATTACTATTTTATTTTTATTATTATTATTATTATGATGCTC
TTGAAATACCCAGAAATGTTACGAGATTTTAATTTCAGGAAAATGTATTGATTCAGCAGGGAAG
AAACATTCTGGTGCTGACGGATGGTCTCCGAATTTTCAGAGACTTCTTTTTTACAATGTTACTC
ATTTGATGACTTTGTAATTTCCTCTTAAGGTTAATTTTTCTGTTTGTATTTCTTTTACTTTGTT
CATTGCACTCAGTACACGCAACAGAAATGACCTCTGGAGAAAGTTCTCAGCCATGTCCACTGGA
ATTAATGGTGACATTGGTGGAATAGGGTTCTGTTTGCACTTGGAACAATAAATCTCGGCCCTTG
ACAAAAAATAGCTGAAGAGATAGACGCTGGCCTGTGTTGCAGAAATGGGATTGTATGCTCTGAG
TGATTTTTCGTTGGTTTAGGGCAGATTTTTATGCAAGCCTTGCCAGGTAAGAGAGGAGAAAAAA
AATCTGATGACTCTAGTATGTATCAGTGAGGGTTCAGTCCCCAAACCGGAAGTTATTCTAGGTG
TTAGTATAGGAAATTAAGTTAATAGAAGATAAAGTAATGAAGCCAAACAGCAGAAGACTGTTAC
CACACCTGGGACTTGAGGACAGTCGGAAGAGGTGTGGCTTCCTGGGGCAGAGGCTGGGATCAGC
CACAGAAACTGGGATGCCAGTGGGGACTCCCTGCTGGGAGCTGGGAGCATTGAGGGGCTGTGGA
AAATGGAGCCGTGGCTGAGGCAAAGCCACTGGCTGAGATGGTGACAGTGCCAGAGCTGAGTCAG
ACACCGAGAAACCCCCTGGCCTGCGTCTCCTGTCCTATGTCTTCCACCAGCATCTGACCATTCC
ATCCTGGAAGCTAGCTGGCCAGAACCCTGGGAGATGTGGCTTCCTCTGATACAGCGTGCAGAGC
AGGGGATAGTGAGGCCACAGAACAGCAAAGAGTGGATAGAAGCCTGGCCTATAATGTGAACATA
TTCCTTGGTGTTCAGCAGTTCATCCAAACATGTATTCATTAAGTTGTCAGATAGTCTACCTATG
TGCAAAAAAATGTTTCTGCTTTATGTGCAAGATGGTCTGTGATAGCTTTAAAATCTACTTAGAA
GTTTTCAAATTATTCCAGATATTATTCTCAGTAAATTTTTTTGTTACCTCTAATTTTGTGAGGA
AGTTTATAGCGAAGATTTGGGGCACTTTGTTTTCAGGATGGTAATATCTTTTGAATTCTTTATA
TATTACTGTATTTTCCTGCCTAATAACTGGTTAACACATGTTCACATTTATTGATTAAAATGTG
ACTGCTTAATTCCTAA

hide sequence

RefSeq Acc Id:

XM_005387792 ⟹ XP_005387849

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955431	18,686,190 - 18,723,221 (+)	NCBI

Sequence:

show sequence

GCGGCCCTCGGACCGTAGTTGCAGAGGGACGGAGATCGCCGCGAGGTCTGGCCGCTCAGGCAGC
GTGGGAACGATGGCAGATGATCGGGAATATGTTGGAGAGCAGGGAGCTGGTGAGTCTGCAAGTA
CAGATGCAGTTGATGCTAAGCCAGACCGGATCTCGTTTGTGTCAGCACTCCTAAAGAAGAAGAA
GAATGGCACCACACGCTCAGCCAGCACTCCTGAGGGCGAGGTGCCTACCTATAAGTATAACATG
AACTTTGAGAAGGTGGGCAAGTGCATCATAATAAACAACAAGAACTTCGACAAAGTGACAGGCA
TGGGCATCCGAAATGGAACGGACAAAGATGCTGCAGCCCTTTTCAAGTGCTTCCGTAGCCTGGG
TTTTGACGTGGTTGTTCATAATGACTGCACCTGTGCCAAGATGCAAGATCTGCTTAAACGAGCT
TCTGAGGAAGACCATACGAATTCAGCCTGCTTCGCCTGCATCTTGTTAAGCCATGGAGAAGAAA
ATTGTATTTATGGAAGAGATGGTGTGACACCAATAAAGGATTTGACGGTCCACTTTCGGGGTGA
TCGATGCAAAACCCTTTTAGAGAAACCCAAACTCTTTTTCATTCAGGCTTGCCGAGGCACGGAG
CTTGATGATGGGGTCCAGGCTGACTCGGGGCCCATCAGTGACACCGATGCTAGCCCCCGCTATA
AGGTCCCGGTCGAAGCTGACTTTCTCTTCGCTTACTCCACGGTCCCAGGCTATTACTCTTGGAG
GAACCCAGGAAGAGGTTCCTGGTTTGTGCAGGCTCTCTGCTCCATCCTGGAGGAACATGGCAAA
GAGCTGGAGCTCATGCAGATCCTTACTAGGGTGAACTACAGAGTAGCCAGACACTTTGAGTCCC
AGTCGGATGACCCTCATTTCAACGAGAAGAAGCAGATCCCATGTGTGGTCTCCATGCTCACCAA
AGAACTGCACTTCCGCAAGTAACCGTTCCTGCTGGCTGAGAAGCCAGGGATTGCTTGTGGATGA
GTCAGATCGTTAGTATCATTATTATTACTATTTTATTTTTATTATTATTATTATTATGATGCTC
TTGAAATACCCAGAAATGTTACGAGATTTTAATTTCAGGAAAATGTATTGATTCAGCAGGGAAG
AAACATTCTGGTGCTGACGGATGGTCTCCGAATTTTCAGAGACTTCTTTTTTACAATGTTACTC
ATTTGATGACTTTGTAATTTCCTCTTAAGGTTAATTTTTCTGTTTGTATTTCTTTTACTTTGTT
CATTGCACTCAGTACACGCAACAGAAATGACCTCTGGAGAAAGTTCTCAGCCATGTCCACTGGA
ATTAATGGTGACATTGGTGGAATAGGGTTCTGTTTGCACTTGGAACAATAAATCTCGGCCCTTG
ACAAAAAATAGCTGAAGAGATAGACGCTGGCCTGTGTTGCAGAAATGGGATTGTATGCTCTGAG
TGATTTTTCGTTGGTTTAGGGCAGATTTTTATGCAAGCCTTGCCAGGTAAGAGAGGAGAAAAAA
AATCTGATGACTCTAGTATGTATCAGTGAGGGTTCAGTCCCCAAACCGGAAGTTATTCTAGGTG
TTAGTATAGGAAATTAAGTTAATAGAAGATAAAGTAATGAAGCCAAACAGCAGAAGACTGTTAC
CACACCTGGGACTTGAGGACAGTCGGAAGAGGTGTGGCTTCCTGGGGCAGAGGCTGGGATCAGC
CACAGAAACTGGGATGCCAGTGGGGACTCCCTGCTGGGAGCTGGGAGCATTGAGGGGCTGTGGA
AAATGGAGCCGTGGCTGAGGCAAAGCCACTGGCTGAGATGGTGACAGTGCCAGAGCTGAGTCAG
ACACCGAGAAACCCCCTGGCCTGCGTCTCCTGTCCTATGTCTTCCACCAGCATCTGACCATTCC
ATCCTGGAAGCTAGCTGGCCAGAACCCTGGGAGATGTGGCTTCCTCTGATACAGCGTGCAGAGC
AGGGGATAGTGAGGCCACAGAACAGCAAAGAGTGGATAGAAGCCTGGCCTATAATGTGAACATA
TTCCTTGGTGTTCAGCAGTTCATCCAAACATGTATTCATTAAGTTGTCAGATAGTCTACCTATG
TGCAAAAAAATGTTTCTGCTTTATGTGCAAGATGGTCTGTGATAGCTTTAAAATCTACTTAGAA
GTTTTCAAATTATTCCAGATATTATTCTCAGTAAATTTTTTTGTTACCTCTAATTTTGTGAGGA
AGTTTATAGCGAAGATTTGGGGCACTTTGTTTTCAGGATGGTAATATCTTTTGAATTCTTTATA
TATTACTGTATTTTCCTGCCTAATAACTGGTTAACACATGTTCACATTTATTGATTAAAATGTG
ACTGCTTAATTCCTAA

hide sequence

RefSeq Acc Id:

XM_013515832 ⟹ XP_013371286

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955431	18,686,190 - 18,723,221 (+)	NCBI

Sequence:

show sequence

GCGGCCCTCGGACCGTAGTTGCAGAGGGACGGAGATCGCCGCGAGGTCTGGCCGCTCAGGCAGC
GTGGGAACGACCTGGGTTCCCGATTCCCACACCGCTGCTTGCTGCCTGTGGGACCTCGACCCTC
TCCGTGCCTGTCTGTTAAGCTGTCTCCTGCTTCCGATTCTGGATACCCAGACCTCTTCAGTACT
GCTGCCCCTAGGTTTATGGTCCACCTCTGCTACCTGTAAACAGTGTGGTGTTAGATGGCAGATG
ATCGGGAATATGTTGGAGAGCAGGGAGCTGGTGAGTCTGCAAGTACAGATGCAGTTGATGCTAA
GCCAGACCGGATCTCGTTTGTGTCAGCACTCCTAAAGAAGAAGAAGAATGGCACCACACGCTCA
GCCAGCACTCCTGAGGGCGAGGTGCCTACCTATAAGTATAACATGAACTTTGAGAAGGTGGGCA
AGTGCATCATAATAAACAACAAGAACTTCGACAAAGTGACAGGCATGGGCATCCGAAATGGAAC
GGACAAAGATGCTGCAGCCCTTTTCAAGTGCTTCCGTAGCCTGGGTTTTGACGTGGTTGTTCAT
AATGACTGCACCTGTGCCAAGATGCAAGATCTGCTTAAACGAGCTTCTGAGGAAGACCATACGA
ATTCAGCCTGCTTCGCCTGCATCTTGTTAAGCCATGGAGAAGAAAATTGTATTTATGGAAGAGA
TGGTGTGACACCAATAAAGGATTTGACGGTCCACTTTCGGGGTGATCGATGCAAAACCCTTTTA
GAGAAACCCAAACTCTTTTTCATTCAGGCTTGCCGAGGCACGGAGCTTGATGATGGGGTCCAGG
CTGACTCGGGGCCCATCAGTGACACCGATGCTAGCCCCCGCTATAAGGTCCCGGTCGAAGCTGA
CTTTCTCTTCGCTTACTCCACGGTCCCAGGCTATTACTCTTGGAGGAACCCAGGAAGAGGTTCC
TGGTTTGTGCAGGCTCTCTGCTCCATCCTGGAGGAACATGGCAAAGAGCTGGAGCTCATGCAGA
TCCTTACTAGGGTGAACTACAGAGTAGCCAGACACTTTGAGTCCCAGTCGGATGACCCTCATTT
CAACGAGAAGAAGCAGATCCCATGTGTGGTCTCCATGCTCACCAAAGAACTGCACTTCCGCAAG
TAACCGTTCCTGCTGGCTGAGAAGCCAGGGATTGCTTGTGGATGAGTCAGATCGTTAGTATCAT
TATTATTACTATTTTATTTTTATTATTATTATTATTATGATGCTCTTGAAATACCCAGAAATGT
TACGAGATTTTAATTTCAGGAAAATGTATTGATTCAGCAGGGAAGAAACATTCTGGTGCTGACG
GATGGTCTCCGAATTTTCAGAGACTTCTTTTTTACAATGTTACTCATTTGATGACTTTGTAATT
TCCTCTTAAGGTTAATTTTTCTGTTTGTATTTCTTTTACTTTGTTCATTGCACTCAGTACACGC
AACAGAAATGACCTCTGGAGAAAGTTCTCAGCCATGTCCACTGGAATTAATGGTGACATTGGTG
GAATAGGGTTCTGTTTGCACTTGGAACAATAAATCTCGGCCCTTGACAAAAAATAGCTGAAGAG
ATAGACGCTGGCCTGTGTTGCAGAAATGGGATTGTATGCTCTGAGTGATTTTTCGTTGGTTTAG
GGCAGATTTTTATGCAAGCCTTGCCAGGTAAGAGAGGAGAAAAAAAATCTGATGACTCTAGTAT
GTATCAGTGAGGGTTCAGTCCCCAAACCGGAAGTTATTCTAGGTGTTAGTATAGGAAATTAAGT
TAATAGAAGATAAAGTAATGAAGCCAAACAGCAGAAGACTGTTACCACACCTGGGACTTGAGGA
CAGTCGGAAGAGGTGTGGCTTCCTGGGGCAGAGGCTGGGATCAGCCACAGAAACTGGGATGCCA
GTGGGGACTCCCTGCTGGGAGCTGGGAGCATTGAGGGGCTGTGGAAAATGGAGCCGTGGCTGAG
GCAAAGCCACTGGCTGAGATGGTGACAGTGCCAGAGCTGAGTCAGACACCGAGAAACCCCCTGG
CCTGCGTCTCCTGTCCTATGTCTTCCACCAGCATCTGACCATTCCATCCTGGAAGCTAGCTGGC
CAGAACCCTGGGAGATGTGGCTTCCTCTGATACAGCGTGCAGAGCAGGGGATAGTGAGGCCACA
GAACAGCAAAGAGTGGATAGAAGCCTGGCCTATAATGTGAACATATTCCTTGGTGTTCAGCAGT
TCATCCAAACATGTATTCATTAAGTTGTCAGATAGTCTACCTATGTGCAAAAAAATGTTTCTGC
TTTATGTGCAAGATGGTCTGTGATAGCTTTAAAATCTACTTAGAAGTTTTCAAATTATTCCAGA
TATTATTCTCAGTAAATTTTTTTGTTACCTCTAATTTTGTGAGGAAGTTTATAGCGAAGATTTG
GGGCACTTTGTTTTCAGGATGGTAATATCTTTTGAATTCTTTATATATTACTGTATTTTCCTGC
CTAATAACTGGTTAACACATGTTCACATTTATTGATTAAAATGTGACTGCTTAATTCCTAA

hide sequence

Protein Sequences


Protein RefSeqs	XP_005387845	(Get FASTA)	NCBI Sequence Viewer
	XP_005387846	(Get FASTA)	NCBI Sequence Viewer
	XP_005387847	(Get FASTA)	NCBI Sequence Viewer
	XP_005387848	(Get FASTA)	NCBI Sequence Viewer
	XP_005387849	(Get FASTA)	NCBI Sequence Viewer
	XP_013371286	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCLAP00000009953
	ENSCLAP00000009953.1

RefSeq Acc Id:	XP_005387845 ⟸ XM_005387788
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C2V7J5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MADDREYVGEQGAGESASTDAVDAKPDRISFVSALLKKKKNGTTRSASTPEGEVPTYKYNMNFE KVGKCIIINNKNFDKVTGMGIRNGTDKDAAALFKCFRSLGFDVVVHNDCTCAKMQDLLKRASEE DHTNSACFACILLSHGEENCIYGRDGVTPIKDLTVHFRGDRCKTLLEKPKLFFIQACRGTELDD GVQADSGPISDTDASPRYKVPVEADFLFAYSTVPGYYSWRNPGRGSWFVQALCSILEEHGKELE LMQILTRVNYRVARHFESQSDDPHFNEKKQIPCVVSMLTKELHFRK hide sequence

RefSeq Acc Id:	XP_005387849 ⟸ XM_005387792
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C2V7J5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MADDREYVGEQGAGESASTDAVDAKPDRISFVSALLKKKKNGTTRSASTPEGEVPTYKYNMNFE KVGKCIIINNKNFDKVTGMGIRNGTDKDAAALFKCFRSLGFDVVVHNDCTCAKMQDLLKRASEE DHTNSACFACILLSHGEENCIYGRDGVTPIKDLTVHFRGDRCKTLLEKPKLFFIQACRGTELDD GVQADSGPISDTDASPRYKVPVEADFLFAYSTVPGYYSWRNPGRGSWFVQALCSILEEHGKELE LMQILTRVNYRVARHFESQSDDPHFNEKKQIPCVVSMLTKELHFRK hide sequence

RefSeq Acc Id:	XP_005387846 ⟸ XM_005387789
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C2V7J5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MADDREYVGEQGAGESASTDAVDAKPDRISFVSALLKKKKNGTTRSASTPEGEVPTYKYNMNFE KVGKCIIINNKNFDKVTGMGIRNGTDKDAAALFKCFRSLGFDVVVHNDCTCAKMQDLLKRASEE DHTNSACFACILLSHGEENCIYGRDGVTPIKDLTVHFRGDRCKTLLEKPKLFFIQACRGTELDD GVQADSGPISDTDASPRYKVPVEADFLFAYSTVPGYYSWRNPGRGSWFVQALCSILEEHGKELE LMQILTRVNYRVARHFESQSDDPHFNEKKQIPCVVSMLTKELHFRK hide sequence

RefSeq Acc Id:

XP_005387847 ⟸ XM_005387790

- Peptide Label:

isoform X2

- Sequence:

show sequence

MRLESEDDGTWPLRKHHTEEQKKKNGTTRSASTPEGEVPTYKYNMNFEKVGKCIIINNKNFDKV
TGMGIRNGTDKDAAALFKCFRSLGFDVVVHNDCTCAKMQDLLKRASEEDHTNSACFACILLSHG
EENCIYGRDGVTPIKDLTVHFRGDRCKTLLEKPKLFFIQACRGTELDDGVQADSGPISDTDASP
RYKVPVEADFLFAYSTVPGYYSWRNPGRGSWFVQALCSILEEHGKELELMQILTRVNYRVARHF
ESQSDDPHFNEKKQIPCVVSMLTKELHFRK

hide sequence

RefSeq Acc Id:

XP_005387848 ⟸ XM_005387791

- Peptide Label:

isoform X3

- Sequence:

show sequence

MNFEKVGKCIIINNKNFDKVTGMGIRNGTDKDAAALFKCFRSLGFDVVVHNDCTCAKMQDLLKR
ASEEDHTNSACFACILLSHGEENCIYGRDGVTPIKDLTVHFRGDRCKTLLEKPKLFFIQACRGT
ELDDGVQADSGPISDTDASPRYKVPVEADFLFAYSTVPGYYSWRNPGRGSWFVQALCSILEEHG
KELELMQILTRVNYRVARHFESQSDDPHFNEKKQIPCVVSMLTKELHFRK

hide sequence

RefSeq Acc Id:	XP_013371286 ⟸ XM_013515832
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C2V7J5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MADDREYVGEQGAGESASTDAVDAKPDRISFVSALLKKKKNGTTRSASTPEGEVPTYKYNMNFE KVGKCIIINNKNFDKVTGMGIRNGTDKDAAALFKCFRSLGFDVVVHNDCTCAKMQDLLKRASEE DHTNSACFACILLSHGEENCIYGRDGVTPIKDLTVHFRGDRCKTLLEKPKLFFIQACRGTELDD GVQADSGPISDTDASPRYKVPVEADFLFAYSTVPGYYSWRNPGRGSWFVQALCSILEEHGKELE LMQILTRVNYRVARHFESQSDDPHFNEKKQIPCVVSMLTKELHFRK hide sequence

RefSeq Acc Id:

ENSCLAP00000009953 ⟸ ENSCLAT00000010083

Protein Domains

Caspase family p10 Caspase family p20

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCLAG00000006895	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCLAT00000010083	ENTREZGENE
	ENSCLAT00000010083.1	UniProtKB/TrEMBL
Gene3D-CATH	3.40.50.1460	UniProtKB/TrEMBL
	Caspase-like	UniProtKB/TrEMBL
InterPro	Caspase-like_dom_sf	UniProtKB/TrEMBL
	Caspase_cys_AS	UniProtKB/TrEMBL
	Caspase_his_AS	UniProtKB/TrEMBL
	Pept_C14_caspase	UniProtKB/TrEMBL
	Pept_C14_p10	UniProtKB/TrEMBL
	Pept_C14_p20	UniProtKB/TrEMBL
	Pept_C14A	UniProtKB/TrEMBL
NCBI Gene	Casp7	ENTREZGENE
PANTHER	PTHR10454	UniProtKB/TrEMBL
	PTHR10454:SF31	UniProtKB/TrEMBL
Pfam	Peptidase_C14	UniProtKB/TrEMBL
PRINTS	IL1BCENZYME	UniProtKB/TrEMBL
PROSITE	CASPASE_CYS	UniProtKB/TrEMBL
	CASPASE_HIS	UniProtKB/TrEMBL
	CASPASE_P10	UniProtKB/TrEMBL
	CASPASE_P20	UniProtKB/TrEMBL
SMART	CASc	UniProtKB/TrEMBL
Superfamily-SCOP	SSF52129	UniProtKB/TrEMBL
UniProt	A0A8C2V7J5	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2016-08-16	Casp7	caspase 7		caspase 7, apoptosis-related cysteine peptidase	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

RGD Manual Annotations

Imported Annotations - SMPDB

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

RGD Manual Annotations

Imported Annotations - SMPDB