ONTOLOGY REPORT - ANNOTATIONS
Term: positive regulation of collagen metabolic process
Accession: GO:0010714
browse the term
Definition: Any process that increases the frequency, rate or extent of the chemical reactions and pathways resulting in the metabolism of collagen, any of a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals.
Synonyms: exact_synonym: positive regulation of collagen metabolism
G
Retn
resistin
IMP
RGD
PMID:20795947
RGD:7207234
NCBI chr12:1,710,881...1,712,621
Ensembl chr12:1,710,881...1,712,620
G
Acvr1b
activin A receptor type 1B
IMP
RGD
PMID:27477354
RGD:151665478
NCBI chr 7:132,286,266...132,329,679
Ensembl chr 7:132,286,275...132,329,673
G
Arrb2
arrestin, beta 2
IMP
RGD
PMID:28274926
RGD:13506828
NCBI chr10:55,146,887...55,154,854
Ensembl chr10:55,146,818...55,154,850
G
Bmp4
bone morphogenetic protein 4
involved_in
IEA ISS ISO
GO_REF:0000107 GO_REF:0000024 (PMID:17720811)
Ensembl UniProt RGD
PMID:17720811
GO_REF:0000024 GO_REF:0000107
NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
G
Cbx8
chromobox 8
IMP
RGD
PMID:23572236
RGD:9586727
NCBI chr10:104,294,518...104,296,956
Ensembl chr10:104,294,518...104,297,024
G
Ccl2
C-C motif chemokine ligand 2
IDA
RGD
PMID:8663511
RGD:8549527
NCBI chr10:67,005,424...67,007,222
Ensembl chr10:67,005,424...67,007,226
G
Ccn2
cellular communication network factor 2
IMP
RGD
PMID:19570811
RGD:2314490
NCBI chr 1:20,802,199...20,805,315
Ensembl chr 1:20,802,199...20,805,734
G
Creb3l1
cAMP responsive element binding protein 3-like 1
involved_in
ISO IEA ISS
(PMID:25310401) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:25310401
GO_REF:0000024 GO_REF:0000107
NCBI chr 3:77,952,589...77,993,513
Ensembl chr 3:77,952,540...77,993,456
G
Ddr2
discoidin domain receptor tyrosine kinase 2
IMP IDA
RGD
PMID:26674152 PMID:24938620
RGD:11554781 , RGD:150429973
NCBI chr13:82,193,623...82,318,229
Ensembl chr13:82,195,463...82,317,363
G
Dicer1
dicer 1 ribonuclease III
IMP
RGD
PMID:24337369
RGD:150340618
NCBI chr 6:123,627,529...123,692,278
Ensembl chr 6:123,631,250...123,693,965
G
Eng
endoglin
IMP
RGD
PMID:20156938
RGD:7257540
NCBI chr 3:15,934,566...15,972,618
Ensembl chr 3:15,934,518...15,973,230
G
Ep300
E1A binding protein p300
IMP
RGD
PMID:18292803
RGD:2312266
NCBI chr 7:113,108,476...113,178,529
Ensembl chr 7:113,106,247...113,136,088 Ensembl chr 7:113,106,247...113,136,088
G
F2
coagulation factor II, thrombin
involved_in
IEA ISO
GO_REF:0000107 (PMID:9639571)
Ensembl RGD
PMID:9639571
GO_REF:0000107
NCBI chr 3:77,596,196...77,609,486
Ensembl chr 3:77,596,198...77,609,486
G
F2r
coagulation factor II (thrombin) receptor
involved_in
ISO IEA ISS
(PMID:9639571) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:9639571
GO_REF:0000024 GO_REF:0000107
NCBI chr 2:26,869,343...26,885,856
Ensembl chr 2:26,868,404...26,885,870
G
Gli2
GLI family zinc finger 2
IMP
RGD
PMID:26823780
RGD:155791684
NCBI chr13:29,946,882...30,163,589
Ensembl chr13:29,946,809...30,163,574
G
Ihh
Indian hedgehog signaling molecule
acts_upstream_of_or_within
ISO
(PMID:10208865)
RGD
PMID:10208865
NCBI chr 9:76,504,315...76,510,532
Ensembl chr 9:76,504,315...76,510,532
G
Il18
interleukin 18
IDA
RGD
PMID:20644901
RGD:4889158
NCBI chr 8:50,904,630...50,932,887
Ensembl chr 8:50,906,960...50,932,887
G
Inhba
inhibin subunit beta A
IDA
RGD
PMID:27477354
RGD:151665478
NCBI chr17:49,091,635...49,111,573
Ensembl chr17:49,095,920...49,108,982
G
Itga2
integrin subunit alpha 2
IMP
RGD
PMID:10867645
RGD:2307406
NCBI chr 2:46,520,345...46,621,487
Ensembl chr 2:46,523,948...46,621,481
G
Larp6
La ribonucleoprotein 6, translational regulator
involved_in
ISO
(PMID:21746880)
RGD
PMID:21746880
NCBI chr 8:61,183,744...61,205,548
Ensembl chr 8:61,184,116...61,205,535
G
Ltbp1
latent transforming growth factor beta binding protein 1
IMP
RGD
PMID:9607192
RGD:10412058
NCBI chr 6:20,029,629...20,425,339
Ensembl chr 6:20,029,629...20,425,349
G
Mir21
microRNA 21
IDA
RGD
PMID:29084974
RGD:41404715
NCBI chr10:71,405,257...71,405,348
Ensembl chr10:71,405,257...71,405,348
G
Mkx
mohawk homeobox
acts_upstream_of_or_within
ISO
MGI:4461224 (PMID:20498044)
RGD
PMID:20498044
NCBI chr17:55,077,073...55,156,877
Ensembl chr17:55,077,540...55,156,124
G
Myb
MYB proto-oncogene, transcription factor
IMP
RGD
PMID:15534927
RGD:11532676
NCBI chr 1:15,939,771...15,973,367
Ensembl chr 1:15,939,761...15,973,057
G
Pdgfb
platelet derived growth factor subunit B
IMP
RGD
PMID:15358192
RGD:10449487
NCBI chr 7:111,539,444...111,557,984
Ensembl chr 7:111,540,345...111,557,984
G
Pdgfrb
platelet derived growth factor receptor beta
IMP
RGD
PMID:15978205
RGD:2292205
NCBI chr18:54,499,962...54,538,840
Ensembl chr18:54,499,964...54,538,843
G
Prdx5
peroxiredoxin 5
involved_in
ISO
(PMID:15276323)
RGD
PMID:15276323
NCBI chr 1:204,099,826...204,103,589
Ensembl chr 1:204,099,826...204,114,268
G
Rgcc
regulator of cell cycle
involved_in
ISO
(PMID:19158077)
RGD
PMID:19158077
NCBI chr15:54,662,483...54,675,320
Ensembl chr15:54,662,483...54,681,141
G
Scx
scleraxis bHLH transcription factor
involved_in
ISO
(MGI:4413438|PMID:18802027), (MGI:5294534|PMID:19362560)
RGD
PMID:18802027 PMID:19362560
MGI:4413438 MGI:5294534
NCBI chr 7:108,176,608...108,178,626
Ensembl chr 7:108,176,608...108,178,626
G
Serpinb7
serpin family B member 7
IMP
RGD
PMID:21945418
RGD:7207383
NCBI chr13:23,369,830...23,442,205
Ensembl chr13:23,395,671...23,442,205
G
Serpine1
serpin family E member 1
IMP
RGD
PMID:15828931
RGD:13208547
NCBI chr12:19,601,272...19,611,657
Ensembl chr12:19,601,272...19,611,657
G
Serpinf2
serpin family F member 2
involved_in
ISO
(PMID:17958745) (MGI:4453296|PMID:18436805)
RGD
PMID:17958745 PMID:18436805
MGI:4453296
NCBI chr10:60,272,400...60,280,506
Ensembl chr10:60,272,400...60,281,243
G
Suco
SUN domain containing ossification factor
involved_in
ISS ISO IEA
GO_REF:0000024 (MGI:4452525|PMID:20440000) GO_REF:0000107
UniProt RGD Ensembl
PMID:20440000
GO_REF:0000024 GO_REF:0000107 MGI:4452525
NCBI chr13:74,192,808...74,257,896
Ensembl chr13:74,193,573...74,257,896
G
Tgfb1
transforming growth factor, beta 1
involved_in
IMP ISO ISS
(MGI:4820704|PMID:19734317) GO_REF:0000024 RNAcentral:URS000024463E_9606 (PMID:11158066), (PMID:19734317), (PMID:22269326), (PMID:25310401)
RGD UniProt
PMID:11158066 PMID:19734317 PMID:22269326 PMID:25310401 PMID:26923362
GO_REF:0000024 MGI:4820704 , RGD:11073665
NCBI chr 1:81,196,532...81,212,848
Ensembl chr 1:81,196,532...81,212,847
G
Tgfb3
transforming growth factor, beta 3
involved_in
ISO ISS
(PMID:11158066) GO_REF:0000024
RGD AgBase
PMID:11158066
GO_REF:0000024
NCBI chr 6:105,704,058...105,726,661
Ensembl chr 6:105,704,236...105,726,564
G
Ucn
urocortin
IDA
RGD
PMID:11087261
RGD:1642796
NCBI chr 6:25,238,120...25,238,950
Ensembl chr 6:25,238,120...25,238,950
G
Uts2
urotensin 2
IDA
RGD
PMID:17184580 PMID:18475149
RGD:2306814 , RGD:2306811
NCBI chr 5:161,450,846...161,456,235
Ensembl chr 5:161,450,846...161,456,237
G
Vim
vimentin
involved_in
IEA ISO
GO_REF:0000107 (PMID:21746880)
Ensembl RGD
PMID:21746880
GO_REF:0000107
NCBI chr17:76,668,701...76,677,186
Ensembl chr17:76,668,647...76,677,187
G
Wnt4
Wnt family member 4
involved_in
ISO
(PMID:17720811)
RGD
PMID:17720811
NCBI chr 5:149,513,573...149,535,415
Ensembl chr 5:149,514,018...149,532,859
G
Idua
alpha-L-iduronidase
acts_upstream_of_or_within
ISO
MGI:2176236 (PMID:19834056)
RGD
PMID:19834056
NCBI chr14:1,031,588...1,059,494
Ensembl chr14:1,032,171...1,046,522
G
Vsir
V-set immunoregulatory receptor
involved_in
ISO
(PMID:20666777)
RGD
PMID:20666777
NCBI chr20:28,281,582...28,307,262
Ensembl chr20:28,281,596...28,303,878
Term paths to the root one shortest all shortest one longest all longest one shortest and longest all