Eprs1 (glutamyl-prolyl-tRNA synthetase 1) - Rat Genome Database

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Pathways
Gene: Eprs1 (glutamyl-prolyl-tRNA synthetase 1) Chinchilla lanigera
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Symbol: Eprs1
Name: glutamyl-prolyl-tRNA synthetase 1
RGD ID: 8889380
Description: ENCODES a protein that exhibits glutamate-tRNA ligase activity (ortholog); GTPase binding (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); cellular response to type II interferon (ortholog); glutamyl-tRNA aminoacylation (ortholog); PARTICIPATES IN AGAT deficiency pathway; arginine and proline metabolic pathway; guanidinoacetate methyltransferase deficiency pathway; ASSOCIATED WITH Developmental Disabilities (ortholog); genetic disease (ortholog); hypomyelinating leukodystrophy 15 (ortholog); FOUND IN aminoacyl-tRNA synthetase multienzyme complex (ortholog); cytoplasm (ortholog); cytosol (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: bifunctional glutamate/proline--tRNA ligase; Eprs; glutamyl-prolyl-tRNA synthetase
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555203,550,558 - 3,606,697 (+)Ensembl
ChiLan1.0NW_0049555203,550,558 - 3,606,015 (+)NCBIChiLan1.0ChiLan1.0
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Transitive Annotation Pipeline Automated assignment of GO, PW and RDO ISO annotations across species
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Eprs1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555203,550,558 - 3,606,697 (+)Ensembl
ChiLan1.0NW_0049555203,550,558 - 3,606,015 (+)NCBIChiLan1.0ChiLan1.0
EPRS1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381219,968,600 - 220,046,505 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1219,968,598 - 220,046,616 (-)Ensemblhg38GRCh38
GRCh371220,141,942 - 220,219,847 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361218,208,565 - 218,286,623 (-)NCBIBuild 36Build 36hg18NCBI36
Build 341216,530,337 - 216,596,723NCBI
Celera1193,361,173 - 193,439,298 (-)NCBICelera
Cytogenetic Map1q41NCBI
HuRef1190,816,669 - 190,894,723 (-)NCBIHuRef
CHM1_11221,414,886 - 221,492,894 (-)NCBICHM1_1
T2T-CHM13v2.01219,207,867 - 219,285,874 (-)NCBIT2T-CHM13v2.0
Eprs1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391185,093,614 - 185,160,557 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1185,095,241 - 185,160,557 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm381185,361,417 - 185,428,360 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1185,363,044 - 185,428,360 (+)Ensemblmm10GRCm38
MGSCv371187,186,974 - 187,252,234 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361187,063,883 - 187,129,143 (+)NCBIMGSCv36mm8
MGSCv361186,479,177 - 186,544,604 (+)NCBIMGSCv36mm8
Celera1192,317,193 - 192,381,950 (+)NCBICelera
Cytogenetic Map1H5NCBI
cM Map189.5NCBI
Eprs1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81399,431,955 - 99,503,510 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1399,433,130 - 99,503,509 (+)EnsemblGRCr8
mRatBN7.21396,901,548 - 96,971,966 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1396,901,575 - 96,971,966 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1399,400,886 - 99,471,298 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.013100,806,806 - 100,876,877 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01397,983,145 - 98,053,557 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.013103,300,911 - 103,371,651 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl13103,300,932 - 103,371,577 (+)Ensemblrn6Rnor6.0
Rnor_5.013107,973,665 - 108,044,298 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.413101,375,656 - 101,448,175 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1396,415,061 - 96,484,921 (+)NCBICelera
RGSC_v3.113101,564,698 - 101,637,217 (+)NCBI
Cytogenetic Map13q26NCBI
EPRS1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2129,367,592 - 29,448,533 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1129,329,946 - 29,411,197 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01195,537,319 - 195,618,257 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11200,575,257 - 200,655,958 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1200,575,259 - 200,656,197 (-)EnsemblpanPan2panpan1.1
EPRS1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13814,754,628 - 14,823,626 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3814,754,632 - 14,823,621 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha3814,797,419 - 14,866,312 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.03814,791,854 - 14,860,285 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3814,791,858 - 14,856,528 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13814,800,874 - 14,869,666 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03815,145,457 - 15,214,419 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03815,435,096 - 15,504,056 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Eprs1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934456,897,415 - 56,971,602 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366502,145,607 - 2,220,019 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049366502,145,614 - 2,219,812 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
EPRS1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl109,579,304 - 9,648,414 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.1109,579,301 - 9,648,416 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21011,663,038 - 11,730,358 (-)NCBISscrofa10.2Sscrofa10.2susScr3
EPRS1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1259,534,747 - 9,618,119 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl259,534,114 - 9,618,141 (+)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_0236660559,840,725 - 9,924,504 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Eprs1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248353,635,457 - 3,695,909 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_0046248353,635,829 - 3,695,875 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
Eprs1
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v11063,514,087 - 63,582,249 (+)NCBIRrattus_CSIRO_v1


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSCLAT00000005528   ⟹   ENSCLAP00000005431
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049555203,550,558 - 3,606,697 (+)Ensembl
Ensembl Acc Id: ENSCLAT00000005529   ⟹   ENSCLAP00000005432
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049555203,550,677 - 3,606,697 (+)Ensembl
RefSeq Acc Id: XM_005409277   ⟹   XP_005409334
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049555203,550,558 - 3,606,015 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005409334 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCLAP00000005431
  ENSCLAP00000005431.1
  ENSCLAP00000005432.1
RefSeq Acc Id: XP_005409334   ⟸   XM_005409277
- UniProtKB: A0A8C2UT66 (UniProtKB/TrEMBL),   A0A8C2UT40 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSCLAP00000005432   ⟸   ENSCLAT00000005529
Ensembl Acc Id: ENSCLAP00000005431   ⟸   ENSCLAT00000005528

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000003851 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCLAT00000005528 ENTREZGENE
  ENSCLAT00000005528.1 UniProtKB/TrEMBL
  ENSCLAT00000005529.1 UniProtKB/TrEMBL
Gene3D-CATH 1.20.1050.130 UniProtKB/TrEMBL
  3.30.110.30 UniProtKB/TrEMBL
  3.40.50.620 UniProtKB/TrEMBL
  3.40.50.800 UniProtKB/TrEMBL
  Bira Bifunctional Protein, Domain 2 UniProtKB/TrEMBL
  Glutamyl-trna Synthetase, Domain 2 UniProtKB/TrEMBL
  Glutamyl-tRNA Synthetase, Domain 3 UniProtKB/TrEMBL
  Ribosomal Protein L25, Chain P UniProtKB/TrEMBL
  S15/NS1, RNA-binding UniProtKB/TrEMBL
InterPro aa-tRNA-synt_IIb UniProtKB/TrEMBL
  aa-tRNA-synth_I_CS UniProtKB/TrEMBL
  aa-tRNA-synth_II UniProtKB/TrEMBL
  aa-tRNA-synth_II/BPL/LPL UniProtKB/TrEMBL
  Anticodon-bd UniProtKB/TrEMBL
  Anticodon-bd_dom_sf UniProtKB/TrEMBL
  Glu-tRNA-synth_arc/euk UniProtKB/TrEMBL
  Glu/Gln-tRNA-synth UniProtKB/TrEMBL
  Glu/Gln-tRNA-synth_Ib_cat-dom UniProtKB/TrEMBL
  Glu/Gln-tRNA-synth_Ib_codon-bd UniProtKB/TrEMBL
  Glu_tRNA_lig_a-bdl UniProtKB/TrEMBL
  Glutathione-S-Trfase_C_sf UniProtKB/TrEMBL
  Pro-tRNA-ligase_IIa_arc-type UniProtKB/TrEMBL
  Pro-tRNA_ligase_II_C UniProtKB/TrEMBL
  Pro-tRNA_synth_II UniProtKB/TrEMBL
  ProRS_core_arch_euk UniProtKB/TrEMBL
  Rbsml_L25/Gln-tRNA_synth_N UniProtKB/TrEMBL
  Ribosomal_L25/Gln-tRNA_synth UniProtKB/TrEMBL
  Rossmann-like_a/b/a_fold UniProtKB/TrEMBL
  S15_NS1_RNA-bd UniProtKB/TrEMBL
  tRNA-synt_1c_C2 UniProtKB/TrEMBL
  WHEP-TRS_dom UniProtKB/TrEMBL
NCBI Gene Eprs ENTREZGENE
PANTHER BIFUNCTIONAL GLUTAMATE/PROLINE--TRNA LIGASE UniProtKB/TrEMBL
  PTHR43382 UniProtKB/TrEMBL
Pfam HGTP_anticodon UniProtKB/TrEMBL
  ProRS-C_1 UniProtKB/TrEMBL
  tRNA-synt_1c UniProtKB/TrEMBL
  tRNA-synt_1c_C UniProtKB/TrEMBL
  tRNA-synt_1c_C2 UniProtKB/TrEMBL
  tRNA-synt_2b UniProtKB/TrEMBL
  WHEP-TRS UniProtKB/TrEMBL
PRINTS TRNASYNTHGLU UniProtKB/TrEMBL
PROSITE AA_TRNA_LIGASE_I UniProtKB/TrEMBL
  AA_TRNA_LIGASE_II UniProtKB/TrEMBL
  WHEP_TRS_1 UniProtKB/TrEMBL
  WHEP_TRS_2 UniProtKB/TrEMBL
SMART ProRS-C_1 UniProtKB/TrEMBL
  WHEP-TRS UniProtKB/TrEMBL
Superfamily-SCOP Class II aaRS ABD-related UniProtKB/TrEMBL
  Nucleotidylyl transferase UniProtKB/TrEMBL
  SSF47060 UniProtKB/TrEMBL
  SSF47616 UniProtKB/TrEMBL
  SSF50715 UniProtKB/TrEMBL
  SSF55681 UniProtKB/TrEMBL
  SSF64586 UniProtKB/TrEMBL
UniProt A0A8C2UT40 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C2UT66 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2019-08-20 Eprs1  glutamyl-prolyl-tRNA synthetase 1  Eprs  glutamyl-prolyl-tRNA synthetase  Symbol and/or name change 5135510 APPROVED