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Gene: Lilrb1 (leukocyte immunoglobulin like receptor B1) Rattus norvegicus

Analyze

No known orthologs.

Symbol:

Lilrb1

Name:

leukocyte immunoglobulin like receptor B1

RGD ID:

6487069

Description:

Predicted to enable inhibitory MHC class I receptor activity. Predicted to be involved in cytokine-mediated signaling pathway and immune response-regulating signaling pathway. Predicted to be located in membrane. Predicted to be active in plasma membrane.

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

leukocyte immunoglobulin-like receptor subfamily B member 3-like; leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 1; LOC100912456; LOC690948; similar to paired-Ig-like receptor A11

RGD Orthologs

Alliance Orthologs

More Info

homologs ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	74,372,772 - 74,379,871 (+)	NCBI		GRCr8
mRatBN7.2	1	65,457,264 - 65,464,523 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	65,457,534 - 65,464,520 (+)	Ensembl		mRatBN7.2 Ensembl
Rnor_6.0	1	63,883,684 - 63,891,697 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	63,964,155 - 63,967,366 (+)	NCBI	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	62,876,160 - 62,883,184 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	63,770,484 - 63,777,186 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	1	63,183,573 - 63,212,699 (+)	NCBI		Celera
Cytogenetic Map	1	q12	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cytokine-mediated signaling pathway (IBA)

immune response-regulating signaling pathway (IBA)

Cellular Component

plasma membrane (IBA)

Molecular Function

inhibitory MHC class I receptor activity (IBA)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Genomics

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1331732	Srn4	Serum renin concentration QTL 4	4.467		renin activity (VT:0005581)	plasma renin activity level (CMO:0000116)	1	43457837	87558729	Rat
1357397	Bw41	Body weight QTL 41	4.19	0.0001	body mass (VT:0001259)	body weight (CMO:0000012)	1	29409279	74409279	Rat
1578649	Bmd8	Bone mineral density QTL 8	4.9		femur mineral mass (VT:0010011)	trabecular volumetric bone mineral density (CMO:0001729)	1	51940904	101229020	Rat
1358359	Sradr1	Stress Responsive Adrenal Weight QTL 1	4.74		adrenal gland mass (VT:0010420)	both adrenal glands wet weight (CMO:0000164)	1	39728272	132889942	Rat
4889929	Bss87	Bone structure and strength QTL 87	6.7		tibia area (VT:1000281)	tibia-fibula cortical bone endosteal cross-sectional area (CMO:0001722)	1	46302615	91302615	Rat
634314	Niddm44	Non-insulin dependent diabetes mellitus QTL 44			blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	1	51941022	208479811	Rat
1331792	Rf29	Renal function QTL 29	4.589		urine potassium amount (VT:0010539)	urine potassium level (CMO:0000128)	1	43457837	87558729	Rat
2313062	Bmd73	Bone mineral density QTL 73	3.9	0.0001	tibia mineral mass (VT:1000283)	compact volumetric bone mineral density (CMO:0001730)	1	46302615	91302615	Rat
8552900	Pigfal1	Plasma insulin-like growth factor 1 level QTL 1	7.4		blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	1	43509952	88509952	Rat
1578654	Bss10	Bone structure and strength QTL 10	4		femur morphology trait (VT:0000559)	femoral neck cortical cross-sectional area (CMO:0001702)	1	51940904	168768703	Rat
1354643	Foco2	Food consumption QTL 2	7.17	0.0001	eating behavior trait (VT:0001431)	food intake rate (CMO:0000427)	1	42122968	87122968	Rat
2313065	Bss67	Bone structure and strength QTL 67	3.1	0.0001	tibia area (VT:1000281)	tibia total energy absorbed before break (CMO:0001736)	1	46302615	91302615	Rat
2313069	Bss68	Bone structure and strength QTL 68	2.9	0.0001	tibia size trait (VT:0100001)	tibia total energy absorbed before break (CMO:0001736)	1	46302615	91302615	Rat
631495	Bp96	Blood pressure QTL 96	4.52		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	66404680	111404680	Rat
70225	Bp58	Blood pressure QTL 58	3.3		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	34184556	172281316	Rat
2313075	Bss66	Bone structure and strength QTL 66	3.4	0.0001	tibia length (VT:0004357)	tibia length (CMO:0000450)	1	46302615	91302615	Rat
2298545	Neuinf8	Neuroinflammation QTL 8	4.6		nervous system integrity trait (VT:0010566)	spinal cord beta-2 microglobulin mRNA level (CMO:0002125)	1	66009857	160501508	Rat
10059597	Bp377	Blood pressure QTL 377	3.42	0.025	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	34565911	208798288	Rat
1331778	Rf28	Renal function QTL 28	4.66		urine potassium amount (VT:0010539)	urine potassium excretion rate (CMO:0000761)	1	43457837	87558729	Rat
2313077	Bss69	Bone structure and strength QTL 69	3.5	0.0001	tibia strength trait (VT:1000284)	bone polar moment of inertia (CMO:0001558)	1	46302615	91302615	Rat
1302788	Scl19	Serum cholesterol QTL 19	4.6	0.001	blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	1	66400974	132889942	Rat
2313402	Anxrr24	Anxiety related response QTL 24			aggression-related behavior trait (VT:0015014)	tameness/aggressiveness composite score (CMO:0002136)	1	51511344	153680016	Rat
1331785	Rf27	Renal function QTL 27	4.643		urine sodium amount (VT:0006274)	urine sodium level (CMO:0000129)	1	30708375	87558729	Rat
61342	Bp27	Blood pressure QTL 27	3.4	0.0006	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	1	65405637	96805205	Rat
1300172	Bp172	Blood pressure QTL 172	3.56		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	1	34565726	79565726	Rat
4889962	Bss94	Bone structure and strength QTL 94	3.8		tibia area (VT:1000281)	tibia-fibula cortical bone endosteal cross-sectional area (CMO:0001722)	1	51909206	91302615	Rat
6903308	Scl36	Serum cholesterol QTL 36	2	0.0125	blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	1	58769992	103769992	Rat
2313092	Bmd72	Bone mineral density QTL 72	2.5	0.0001	tibia mineral mass (VT:1000283)	total volumetric bone mineral density (CMO:0001728)	1	46302615	91302615	Rat
2300164	Bmd44	Bone mineral density QTL 44	5.4	0.0001	lumbar vertebra mineral mass (VT:0010511)	volumetric bone mineral density (CMO:0001553)	1	66077886	111077886	Rat
2313097	Bss70	Bone structure and strength QTL 70	3.5	0.0001	tibia strength trait (VT:1000284)	tibia total energy absorbed before break (CMO:0001736)	1	46302615	91302615	Rat
9589820	Insglur3	Insulin/glucose ratio QTL 3	10.75	0.001	blood insulin amount (VT:0001560)	calculated plasma insulin level (CMO:0002170)	1	43509952	88509952	Rat
1354599	Bw29	Body weight QTL 29	3.46	0.001	body mass (VT:0001259)	body weight (CMO:0000012)	1	42122968	87122968	Rat
4889919	Bss86	Bone structure and strength QTL 86	4.1		tibia area (VT:1000281)	tibia midshaft total cross-sectional area (CMO:0001715)	1	46302615	91302615	Rat
8552948	Pigfal11	Plasma insulin-like growth factor 1 level QTL 11	4.7		blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	1	43509952	88509952	Rat

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_003748711	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006228039	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006228040	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006228042	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006228043	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017588596	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017588599	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017588602	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017588604	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017588606	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017589922	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039100379	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063280906	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_010062963	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JAXUCZ010000001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000078512 ⟹ ENSRNOP00000075528

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	1	63,964,155 - 63,967,366 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000080799 ⟹ ENSRNOP00000070789

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	1	65,457,534 - 65,464,295 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000113262 ⟹ ENSRNOP00000094182

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	1	65,457,534 - 65,464,520 (+)	Ensembl

RefSeq Acc Id:

XM_003748711 ⟹ XP_003748759

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	74,372,772 - 74,379,871 (+)	NCBI
mRatBN7.2	1	65,457,404 - 65,464,523 (+)	NCBI
Rnor_6.0	1	63,883,901 - 63,891,061 (+)	NCBI
Rnor_5.0	1	62,876,160 - 62,883,184 (+)	NCBI

Sequence:

show sequence

GGCCACACCCTGTTTCCAATCCCTTCAGAAAAGCTCTGTAGCTCTGCTCTCAAGCAGAGTTGCA
GCCTCTGAGAGGAGATGCCATGACCTTCACCTTCACAGCCCTGCTCTGTCTTGGACTGACTCTG
GGCCTCTGGATCCCAGTGCTGACAGGGTCCCTCCCTAAGCCTATCCTCAGAGTACAGCCAGATT
CTGTGGTCTCAATGGGAACTACGGTGACCTTCATTTGTGAGGAGACCATTGGAGCCAAAGAGTC
TGATCTCTATAGAAATGGAAACCTACAGAGAAGAGTTCCAAAGAACAATCAGAAGCCAACAAAC
AAGACTGAATTCTTATTTTTAAATGTAGGCCATCAAAATGCAGGGCAATATCACTGTTCCTACA
AGTCTCAGGGTAAATCATCAGACTACAGTGAGCCCCTGGAGCTAGTGGTCACAGGAGCCTACTC
GAAACCCAGCCTTTCAGTCCAGTCCAATCCTGTGGTGACCTCAGGAGGGTATGTCACCCTCAAA
TGTGAGCCCTCACATTATGATCACACATTGATTCTTACTGTAGAAGGATCTCAGAAACCCTCCT
GGAGGCAGGAAACACAGTGTAACCACTACACTGGGAAGTGTCATGCCCTGTTCCCTGTGGGCCC
TTTGACCTCCAACCAGAGGTGGATATTCAGATGCTACAGCTATGAAACTAACACACCACAAGTG
TGGTCAGCTCCTAGTGAACCAGTGGAGCTCCTGGTGTCAGGGAAACTGCAAAAACCAACCATCA
AGGCTGAACCAGGCTCTGTGATGCACTCTGGAAGGGCCATGACCATCTGGTGTCAGGGGGACCT
GGATGCAGAAATATATTTTCTGTATAAGGAGGGAAGCCACAATACACAGAGCACACAGACCCTA
CAACAGCCTGGGAACAAGGCCAAGTTCTTCATCCCTTCTGTGACACAAAGCCATGCAGGGCAAT
ATGGCTGTTACTGTTACAGCTCAGCTGGTTGGTCAGAGCCCAGTGACACCCTGGAGCTGGTGGT
GACAGGAATGTACAACTACTATCCACTCATGCTGTCAGGACTGCCCAGCCCTGTGGTGCCAGAG
GGAGGGAACGTGACACTCCACTGTACCTCACTCCGAAACTATGATAAATTCATTCTCACCAAGG
AAGATCAGAAGTTCACCAACTCACTAGACACAGAGTATATACCTTCTACTGGACAACACCAAGC
CCTGTTTGTATTGGGACCCATGACCCCAAACTACTCAGGGACATTCAGATGTTATGGTTACTAC
AAGAATACCCCACAGTTGTGGTCAGTACCCAGTGAGCTCCTAAAAATACTCATCTCAGGACCAT
TGAGGAAGCCATCTCTGCTAAGTCATCAAGGACGTATACTAAATCCTGGAATGAGCCTCACACT
GCAGTGTTACTCTGACATCAATTATGACAAATTTGCACTGTACAAAGAAGGGGGAGCTGACATC
ATACAGTCCTCTAGCCAGTGGACCAAGGCTGGCCTCTCCAAAGCCAACTTCACACTGGGATATG
TAAACCACTCCACTGGAGGCCAATACAGATGCTATGGTGCACACAACCTCTCCTCTGAGTTGTC
GGCCTCCAGTGACCCCCTGGACATCCTGATCACAGGACAGATTTATGACACACCTTCCCTCTCA
GTGATGCCCAACTCCACAGTACACTCAGGAGAGAATGTGACCCTGATGTGTTGGTCAAAGTACT
CTGTGGACACTTTCATTCTGTCAAAGGAGGGATCAGGCCAGCCACCCCTTCGACGAAAGTCAAA
GTTCCAAGATCAACAGTACCAGTCAGAATTCTCCATGAGAGCTGTGACATCCAAGCTCTCGGGC
ACCTACAGGTGCTATGGTTCTCCCGACTCATCTCTCTACCTGTTGTCATTTGCCAGTGCCCCTG
TGGAGCTCATAGTCTCAGAATCCATCGAAGCCTCCAGCTGGCCAGCTAAAAGGTTCATCACAAC
AGCCACTCCAGAAAACCAGGATCACACAATGGAGAATCTCATCAGGATGGGGATGGCTGTCCTG
GTCCTCATAGTCCTTTCGATTCTAGCTGCTGTGGCCTGGCAAAGTCATAGACAGACCCACCACG
CAGCTGGCAAATAATCTAAAGAGAAAGGACAGCTTTCAATGTTCTACACTCTGCGAAATGAATC
TGATGATCCAAAATTTTCTGTCAGAAAAATGTGTTGTGATAGAAGTCCAGGGAGCAAAACTGTT
TGGGGTTCTGAGGAAAGAAGTTTTATGATGAGGTGATTCCTTGGTGAACAAATATTTGTCCCTC
ACATACTGGGGGTCTTTGCTTCCTGAACCCACACTCTTCTGAAACTATGAAATAATAAAATATT
CTGTCCCATCTGACTGGAATTTCTTTCAGCTATTGATTGTATTTTTTTAAGGGATTAACTCATT
CACCTTTGAAGGCCTCTGTCATCTTTATAAATTGTATTTAGGGTCATTTCCTTGTTTGTTTTGT
GCTTGT

hide sequence

RefSeq Acc Id:

XM_006228039 ⟹ XP_006228101

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	74,372,772 - 74,379,871 (+)	NCBI
mRatBN7.2	1	65,457,403 - 65,464,523 (+)	NCBI
Rnor_6.0	1	63,883,901 - 63,891,062 (+)	NCBI
Rnor_5.0	1	62,876,160 - 62,883,184 (+)	NCBI

Sequence:

show sequence

GGCCACACCCTGTTTCCAATCCCTTCAGAAAAGCTCTGTAGCTCTGCTCTCAAGCAGAGTTGCA
GCCTCTGAGAGGAGATGCCATGACCTTCACCTTCACAGCCCTGCTCTGTCTTGGACTGACTCTG
GGCCTCTGGATCCCAGTGCTGACAGGGTCCCTCCCTAAGCCTATCCTCAGAGTACAGCCAGATT
CTGTGGTCTCAATGGGAACTACGGTGACCTTCATTTGTGAGGAGACCATTGGAGCCAAAGAGTC
TGATCTCTATAGAAATGGAAACCTACAGAGAAGAGTTCCAAAGAACAATCAGAAGCCAACAAAC
AAGACTGAATTCTTATTTTTAAATGTAGGCCATCAAAATGCAGGGCAATATCACTGTTCCTACA
AGTCTCAGGGTAAATCATCAGACTACAGTGAGCCCCTGGAGCTAGTGGTCACAGGAGCCTACTC
GAAACCCAGCCTTTCAGTCCAGTCCAATCCTGTGGTGACCTCAGGAGGGTATGTCACCCTCAAA
TGTGAGCCCTCACATTATGATCACACATTGATTCTTACTGTAGAAGGATCTCAGAAACCCTCCT
GGAGGCAGGAAACACAGTGTAACCACTACACTGGGAAGTGTCATGCCCTGTTCCCTGTGGGCCC
TTTGACCTCCAACCAGAGGTGGATATTCAGATGCTACAGCTATGAAACTAACACACCACAAGTG
TGGTCAGCTCCTAGTGAACCAGTGGAGCTCCTGGTGTCAGGGAAACTGCAAAAACCAACCATCA
AGGCTGAACCAGGCTCTGTGATGCACTCTGGAAGGGCCATGACCATCTGGTGTCAGGGGGACCT
GGATGCAGAAATATATTTTCTGTATAAGGAGGGAAGCCACAATACACAGAGCACACAGACCCTA
CAACAGCCTGGGAACAAGGCCAAGTTCTTCATCCCTTCTGTGACACAAAGCCATGCAGGGCAAT
ATGGCTGTTACTGTTACAGCTCAGCTGGTTGGTCAGAGCCCAGTGACACCCTGGAGCTGGTGGT
GACAGGAATGTACAACTACTATCCACTCATGCTGTCAGGACTGCCCAGCCCTGTGGTGCCAGAG
GGAGGGAACGTGACACTCCACTGTACCTCACTCCGAAACTATGATAAATTCATTCTCACCAAGG
AAGATCAGAAGTTCACCAACTCACTAGACACAGAGTATATACCTTCTACTGGACAACACCAAGC
CCTGTTTGTATTGGGACCCATGACCCCAAACTACTCAGGGACATTCAGATGTTATGGTTACTAC
AAGAATACCCCACAGTTGTGGTCAGTACCCAGTGAGCTCCTAAAAATACTCATCTCAGGACCAT
TGAGGAAGCCATCTCTGCTAAGTCATCAAGGACGTATACTAAATCCTGGAATGAGCCTCACACT
GCAGTGTTACTCTGACATCAATTATGACAAATTTGCACTGTACAAAGAAGGGGGAGCTGACATC
ATACAGTCCTCTAGCCAGTGGACCAAGGCTGGCCTCTCCAAAGCCAACTTCACACTGGGATATG
TAAACCACTCCACTGGAGGCCAATACAGATGCTATGGTGCACACAACCTCTCCTCTGAGTTGTC
GGCCTCCAGTGACCCCCTGGACATCCTGATCACAGGACAGATTTATGACACACCTTCCCTCTCA
GTGATGCCCAACTCCACAGTACACTCAGGAGAGAATGTGACCCTGATGTGTTGGTCAAAGTACT
CTGTGGACACTTTCATTCTGTCAAAGGAGGGATCAGGCCAGCCACCCCTTCGACGAAAGTCAAA
GTTCCAAGATCAACAGTACCAGTCAGAATTCTCCATGAGAGCTGTGACATCCAAGCTCTCGGGC
ACCTACAGGTGCTATGGTTCTCCCGACTCATCTCTCTACCTGTTGTCATTTGCCAGTGCCCCTG
TGGAGCTCATAGTCTCAGCTCCAGAAAACCAGGATCACACAATGGAGAATCTCATCAGGATGGG
GATGGCTGTCCTGGTCCTCATAGTCCTTTCGATTCTAGCTGCTGTGGCCTGGCAAAGTCATAGA
CAGACCCACCACGCAGCTGGCAAATAATCTAAAGAGAAAGGACAGCTTTCAATGTTCTACACTC
TGCGAAATGAATCTGATGATCCAAAATTTTCTGTCAGAAAAATGTGTTGTGATAGAAGTCCAGG
GAGCAAAACTGTTTGGGGTTCTGAGGAAAGAAGTTTTATGATGAGGTGATTCCTTGGTGAACAA
ATATTTGTCCCTCACATACTGGGGGTCTTTGCTTCCTGAACCCACACTCTTCTGAAACTATGAA
ATAATAAAATATTCTGTCCCATCTGACTGGAATTTCTTTCAGCTATTGATTGTATTTTTTTAAG
GGATTAACTCATTCACCTTTGAAGGCCTCTGTCATCTTTATAAATTGTATTTAGGGTCATTTCC
TTGTTTGTTTTGTGCTTGTG

hide sequence

RefSeq Acc Id:

XM_006228040 ⟹ XP_006228102

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	74,372,772 - 74,379,871 (+)	NCBI
mRatBN7.2	1	65,457,403 - 65,464,259 (+)	NCBI
Rnor_6.0	1	63,883,901 - 63,890,542 (+)	NCBI
Rnor_5.0	1	62,876,160 - 62,883,184 (+)	NCBI

Sequence:

show sequence

GGCCACACCCTGTTTCCAATCCCTTCAGAAAAGCTCTGTAGCTCTGCTCTCAAGCAGAGTTGCA
GCCTCTGAGAGGAGATGCCATGACCTTCACCTTCACAGCCCTGCTCTGTCTTGGACTGACTCTG
GGCCTCTGGATCCCAGTGCTGACAGGGTCCCTCCCTAAGCCTATCCTCAGAGTACAGCCAGATT
CTGTGGTCTCAATGGGAACTACGGTGACCTTCATTTGTGAGGAGACCATTGGAGCCAAAGAGTC
TGATCTCTATAGAAATGGAAACCTACAGAGAAGAGTTCCAAAGAACAATCAGAAGCCAACAAAC
AAGACTGAATTCTTATTTTTAAATGTAGGCCATCAAAATGCAGGGCAATATCACTGTTCCTACA
AGTCTCAGGGTAAATCATCAGACTACAGTGAGCCCCTGGAGCTAGTGGTCACAGGAGCCTACTC
GAAACCCAGCCTTTCAGTCCAGTCCAATCCTGTGGTGACCTCAGGAGGGTATGTCACCCTCAAA
TGTGAGCCCTCACATTATGATCACACATTGATTCTTACTGTAGAAGGATCTCAGAAACCCTCCT
GGAGGCAGGAAACACAGTGTAACCACTACACTGGGAAGTGTCATGCCCTGTTCCCTGTGGGCCC
TTTGACCTCCAACCAGAGGTGGATATTCAGATGCTACAGCTATGAAACTAACACACCACAAGTG
TGGTCAGCTCCTAGTGAACCAGTGGAGCTCCTGGTGTCAGGGAAACTGCAAAAACCAACCATCA
AGGCTGAACCAGGCTCTGTGATGCACTCTGGAAGGGCCATGACCATCTGGTGTCAGGGGGACCT
GGATGCAGAAATATATTTTCTGTATAAGGAGGGAAGCCACAATACACAGAGCACACAGACCCTA
CAACAGCCTGGGAACAAGGCCAAGTTCTTCATCCCTTCTGTGACACAAAGCCATGCAGGGCAAT
ATGGCTGTTACTGTTACAGCTCAGCTGGTTGGTCAGAGCCCAGTGACACCCTGGAGCTGGTGGT
GACAGGAATGTACAACTACTATCCACTCATGCTGTCAGGACTGCCCAGCCCTGTGGTGCCAGAG
GGAGGGAACGTGACACTCCACTGTACCTCACTCCGAAACTATGATAAATTCATTCTCACCAAGG
AAGATCAGAAGTTCACCAACTCACTAGACACAGAGTATATACCTTCTACTGGACAACACCAAGC
CCTGTTTGTATTGGGACCCATGACCCCAAACTACTCAGGGACATTCAGATGTTATGGTTACTAC
AAGAATACCCCACAGTTGTGGTCAGTACCCAGTGAGCTCCTAAAAATACTCATCTCAGGACCAT
TGAGGAAGCCATCTCTGCTAAGTCATCAAGGACGTATACTAAATCCTGGAATGAGCCTCACACT
GCAGTGTTACTCTGACATCAATTATGACAAATTTGCACTGTACAAAGAAGGGGGAGCTGACATC
ATACAGTCCTCTAGCCAGTGGACCAAGGCTGGCCTCTCCAAAGCCAACTTCACACTGGGATATG
TAAACCACTCCACTGGAGGCCAATACAGATGCTATGGTGCACACAACCTCTCCTCTGAGTTGTC
GGCCTCCAGTGACCCCCTGGACATCCTGATCACAGGACAGATTTATGACACACCTTCCCTCTCA
GTGATGCCCAACTCCACAGTACACTCAGGAGAGAATGTGACCCTGATGTGTTGGTCAAAGTACT
CTGTGGACACTTTCATTCTGTCAAAGGAGGGATCAGGCCAGCCACCCCTTCGACGAAAGTCAAA
GTTCCAAGATCAACAGTACCAGTCAGAATTCTCCATGAGAGCTGTGACATCCAAGCTCTCGGGC
ACCTACAGGTGCTATGGTTCTCCCGACTCATCTCTCTACCTGTTGTCATTTGCCAGTGCCCCTG
TGGAGCTCATAGTCTCAGAATCCATCGAAGCCTCCAGCTGGCCAGCTAAAAGGTTCATCACAAC
AGCCAGACTAGCTGAGACAATCTGTCCATCCTACAACATACGCAAACCTCAGACAATTGAATAA
AGAGAAGTCCACCTCGTAGCATGGGAAAGAGTAGAATCTTATCCTCTTCAGGAAAACAAGGGCC
CTGGAGGGATGTTTCATCCCTAACTTCTGTGACTTCTGTATCTAATA

hide sequence

RefSeq Acc Id:

XM_006228042 ⟹ XP_006228104

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	74,372,772 - 74,379,871 (+)	NCBI
mRatBN7.2	1	65,457,403 - 65,464,523 (+)	NCBI
Rnor_6.0	1	63,883,894 - 63,891,067 (+)	NCBI
Rnor_5.0	1	62,876,160 - 62,883,184 (+)	NCBI

Sequence:

show sequence

CTTCCAGGGCCACACCCTGTTTCCAATCCCTTCAGAAAAGCTCTGTAGCTCTGCTCTCAAGCAG
AGTTGCAGCCTCTGAGAGGAGATGCCATGACCTTCACCTTCACAGCCCTGCTCTGTCTTGGACT
GACTCTGGGCCTCTGGATCCCAGTGCTGACAGGCCATCAAAATGCAGGGCAATATCACTGTTCC
TACAAGTCTCAGGGTAAATCATCAGACTACAGTGAGCCCCTGGAGCTAGTGGTCACAGGAGCCT
ACTCGAAACCCAGCCTTTCAGTCCAGTCCAATCCTGTGGTGACCTCAGGAGGGTATGTCACCCT
CAAATGTGAGCCCTCACATTATGATCACACATTGATTCTTACTGTAGAAGGATCTCAGAAACCC
TCCTGGAGGCAGGAAACACAGTGTAACCACTACACTGGGAAGTGTCATGCCCTGTTCCCTGTGG
GCCCTTTGACCTCCAACCAGAGGTGGATATTCAGATGCTACAGCTATGAAACTAACACACCACA
AGTGTGGTCAGCTCCTAGTGAACCAGTGGAGCTCCTGGTGTCAGGGAAACTGCAAAAACCAACC
ATCAAGGCTGAACCAGGCTCTGTGATGCACTCTGGAAGGGCCATGACCATCTGGTGTCAGGGGG
ACCTGGATGCAGAAATATATTTTCTGTATAAGGAGGGAAGCCACAATACACAGAGCACACAGAC
CCTACAACAGCCTGGGAACAAGGCCAAGTTCTTCATCCCTTCTGTGACACAAAGCCATGCAGGG
CAATATGGCTGTTACTGTTACAGCTCAGCTGGTTGGTCAGAGCCCAGTGACACCCTGGAGCTGG
TGGTGACAGGAATGTACAACTACTATCCACTCATGCTGTCAGGACTGCCCAGCCCTGTGGTGCC
AGAGGGAGGGAACGTGACACTCCACTGTACCTCACTCCGAAACTATGATAAATTCATTCTCACC
AAGGAAGATCAGAAGTTCACCAACTCACTAGACACAGAGTATATACCTTCTACTGGACAACACC
AAGCCCTGTTTGTATTGGGACCCATGACCCCAAACTACTCAGGGACATTCAGATGTTATGGTTA
CTACAAGAATACCCCACAGTTGTGGTCAGTACCCAGTGAGCTCCTAAAAATACTCATCTCAGGA
CCATTGAGGAAGCCATCTCTGCTAAGTCATCAAGGACGTATACTAAATCCTGGAATGAGCCTCA
CACTGCAGTGTTACTCTGACATCAATTATGACAAATTTGCACTGTACAAAGAAGGGGGAGCTGA
CATCATACAGTCCTCTAGCCAGTGGACCAAGGCTGGCCTCTCCAAAGCCAACTTCACACTGGGA
TATGTAAACCACTCCACTGGAGGCCAATACAGATGCTATGGTGCACACAACCTCTCCTCTGAGT
TGTCGGCCTCCAGTGACCCCCTGGACATCCTGATCACAGGACAGATTTATGACACACCTTCCCT
CTCAGTGATGCCCAACTCCACAGTACACTCAGGAGAGAATGTGACCCTGATGTGTTGGTCAAAG
TACTCTGTGGACACTTTCATTCTGTCAAAGGAGGGATCAGGCCAGCCACCCCTTCGACGAAAGT
CAAAGTTCCAAGATCAACAGTACCAGTCAGAATTCTCCATGAGAGCTGTGACATCCAAGCTCTC
GGGCACCTACAGGTGCTATGGTTCTCCCGACTCATCTCTCTACCTGTTGTCATTTGCCAGTGCC
CCTGTGGAGCTCATAGTCTCAGAATCCATCGAAGCCTCCAGCTGGCCAGCTAAAAGGTTCATCA
CAACAGCCACTCCAGAAAACCAGGATCACACAATGGAGAATCTCATCAGGATGGGGATGGCTGT
CCTGGTCCTCATAGTCCTTTCGATTCTAGCTGCTGTGGCCTGGCAAAGTCATAGACAGACCCAC
CACGCAGCTGGCAAATAATCTAAAGAGAAAGGACAGCTTTCAATGTTCTACACTCTGCGAAATG
AATCTGATGATCCAAAATTTTCTGTCAGAAAAATGTGTTGTGATAGAAGTCCAGGGAGCAAAAC
TGTTTGGGGTTCTGAGGAAAGAAGTTTTATGATGAGGTGATTCCTTGGTGAACAAATATTTGTC
CCTCACATACTGGGGGTCTTTGCTTCCTGAACCCACACTCTTCTGAAACTATGAAATAATAAAA
TATTCTGTCCCATCTGACTGGAATTTCTTTCAGCTATTGATTGTATTTTTTTAAGGGATTAACT
CATTCACCTTTGAAGGCCTCTGTCATCTTTATAAATTGTATTTAGGGTCATTTCCTTGTTTGTT
TTGTGCTTGTGTGTGT

hide sequence

RefSeq Acc Id:

XM_039100379 ⟹ XP_038956307

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	74,372,772 - 74,376,675 (+)	NCBI
mRatBN7.2	1	65,457,403 - 65,461,312 (+)	NCBI

RefSeq Acc Id:

XM_063280906 ⟹ XP_063136976

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	74,372,773 - 74,379,871 (+)	NCBI

RefSeq Acc Id:

XR_010062963

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	1	74,372,772 - 74,379,679 (+)	NCBI

Protein Sequences


Protein RefSeqs	XP_003748759	(Get FASTA)	NCBI Sequence Viewer
	XP_006228101	(Get FASTA)	NCBI Sequence Viewer
	XP_006228102	(Get FASTA)	NCBI Sequence Viewer
	XP_006228104	(Get FASTA)	NCBI Sequence Viewer
	XP_038956307	(Get FASTA)	NCBI Sequence Viewer
	XP_063136976	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000070789.2
	ENSRNOP00000075528.2
	ENSRNOP00000094182.1

RefSeq Acc Id:	XP_003748759 ⟸ XM_003748711
- Peptide Label:	isoform X1
- UniProtKB:	A0A0G2JYU1 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTFTFTALLCLGLTLGLWIPVLTGSLPKPILRVQPDSVVSMGTTVTFICEETIGAKESDLYRNG NLQRRVPKNNQKPTNKTEFLFLNVGHQNAGQYHCSYKSQGKSSDYSEPLELVVTGAYSKPSLSV QSNPVVTSGGYVTLKCEPSHYDHTLILTVEGSQKPSWRQETQCNHYTGKCHALFPVGPLTSNQR WIFRCYSYETNTPQVWSAPSEPVELLVSGKLQKPTIKAEPGSVMHSGRAMTIWCQGDLDAEIYF LYKEGSHNTQSTQTLQQPGNKAKFFIPSVTQSHAGQYGCYCYSSAGWSEPSDTLELVVTGMYNY YPLMLSGLPSPVVPEGGNVTLHCTSLRNYDKFILTKEDQKFTNSLDTEYIPSTGQHQALFVLGP MTPNYSGTFRCYGYYKNTPQLWSVPSELLKILISGPLRKPSLLSHQGRILNPGMSLTLQCYSDI NYDKFALYKEGGADIIQSSSQWTKAGLSKANFTLGYVNHSTGGQYRCYGAHNLSSELSASSDPL DILITGQIYDTPSLSVMPNSTVHSGENVTLMCWSKYSVDTFILSKEGSGQPPLRRKSKFQDQQY QSEFSMRAVTSKLSGTYRCYGSPDSSLYLLSFASAPVELIVSESIEASSWPAKRFITTATPENQ DHTMENLIRMGMAVLVLIVLSILAAVAWQSHRQTHHAAGK hide sequence

RefSeq Acc Id:

XP_006228104 ⟸ XM_006228042

- Peptide Label:

isoform X4

- Sequence:

show sequence

MTFTFTALLCLGLTLGLWIPVLTGHQNAGQYHCSYKSQGKSSDYSEPLELVVTGAYSKPSLSVQ
SNPVVTSGGYVTLKCEPSHYDHTLILTVEGSQKPSWRQETQCNHYTGKCHALFPVGPLTSNQRW
IFRCYSYETNTPQVWSAPSEPVELLVSGKLQKPTIKAEPGSVMHSGRAMTIWCQGDLDAEIYFL
YKEGSHNTQSTQTLQQPGNKAKFFIPSVTQSHAGQYGCYCYSSAGWSEPSDTLELVVTGMYNYY
PLMLSGLPSPVVPEGGNVTLHCTSLRNYDKFILTKEDQKFTNSLDTEYIPSTGQHQALFVLGPM
TPNYSGTFRCYGYYKNTPQLWSVPSELLKILISGPLRKPSLLSHQGRILNPGMSLTLQCYSDIN
YDKFALYKEGGADIIQSSSQWTKAGLSKANFTLGYVNHSTGGQYRCYGAHNLSSELSASSDPLD
ILITGQIYDTPSLSVMPNSTVHSGENVTLMCWSKYSVDTFILSKEGSGQPPLRRKSKFQDQQYQ
SEFSMRAVTSKLSGTYRCYGSPDSSLYLLSFASAPVELIVSESIEASSWPAKRFITTATPENQD
HTMENLIRMGMAVLVLIVLSILAAVAWQSHRQTHHAAGK

hide sequence

RefSeq Acc Id:	XP_006228101 ⟸ XM_006228039
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I6AZE5 (UniProtKB/TrEMBL), A0A0G2KAU3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTFTFTALLCLGLTLGLWIPVLTGSLPKPILRVQPDSVVSMGTTVTFICEETIGAKESDLYRNG NLQRRVPKNNQKPTNKTEFLFLNVGHQNAGQYHCSYKSQGKSSDYSEPLELVVTGAYSKPSLSV QSNPVVTSGGYVTLKCEPSHYDHTLILTVEGSQKPSWRQETQCNHYTGKCHALFPVGPLTSNQR WIFRCYSYETNTPQVWSAPSEPVELLVSGKLQKPTIKAEPGSVMHSGRAMTIWCQGDLDAEIYF LYKEGSHNTQSTQTLQQPGNKAKFFIPSVTQSHAGQYGCYCYSSAGWSEPSDTLELVVTGMYNY YPLMLSGLPSPVVPEGGNVTLHCTSLRNYDKFILTKEDQKFTNSLDTEYIPSTGQHQALFVLGP MTPNYSGTFRCYGYYKNTPQLWSVPSELLKILISGPLRKPSLLSHQGRILNPGMSLTLQCYSDI NYDKFALYKEGGADIIQSSSQWTKAGLSKANFTLGYVNHSTGGQYRCYGAHNLSSELSASSDPL DILITGQIYDTPSLSVMPNSTVHSGENVTLMCWSKYSVDTFILSKEGSGQPPLRRKSKFQDQQY QSEFSMRAVTSKLSGTYRCYGSPDSSLYLLSFASAPVELIVSAPENQDHTMENLIRMGMAVLVL IVLSILAAVAWQSHRQTHHAAGK hide sequence

RefSeq Acc Id:

XP_006228102 ⟸ XM_006228040

- Peptide Label:

isoform X3

- Sequence:

show sequence

MTFTFTALLCLGLTLGLWIPVLTGSLPKPILRVQPDSVVSMGTTVTFICEETIGAKESDLYRNG
NLQRRVPKNNQKPTNKTEFLFLNVGHQNAGQYHCSYKSQGKSSDYSEPLELVVTGAYSKPSLSV
QSNPVVTSGGYVTLKCEPSHYDHTLILTVEGSQKPSWRQETQCNHYTGKCHALFPVGPLTSNQR
WIFRCYSYETNTPQVWSAPSEPVELLVSGKLQKPTIKAEPGSVMHSGRAMTIWCQGDLDAEIYF
LYKEGSHNTQSTQTLQQPGNKAKFFIPSVTQSHAGQYGCYCYSSAGWSEPSDTLELVVTGMYNY
YPLMLSGLPSPVVPEGGNVTLHCTSLRNYDKFILTKEDQKFTNSLDTEYIPSTGQHQALFVLGP
MTPNYSGTFRCYGYYKNTPQLWSVPSELLKILISGPLRKPSLLSHQGRILNPGMSLTLQCYSDI
NYDKFALYKEGGADIIQSSSQWTKAGLSKANFTLGYVNHSTGGQYRCYGAHNLSSELSASSDPL
DILITGQIYDTPSLSVMPNSTVHSGENVTLMCWSKYSVDTFILSKEGSGQPPLRRKSKFQDQQY
QSEFSMRAVTSKLSGTYRCYGSPDSSLYLLSFASAPVELIVSESIEASSWPAKRFITTARLAET
ICPSYNIRKPQTIE

hide sequence

RefSeq Acc Id:	XP_038956307 ⟸ XM_039100379
- Peptide Label:	isoform X6

Ensembl Acc Id:

ENSRNOP00000075528 ⟸ ENSRNOT00000078512

Ensembl Acc Id:

ENSRNOP00000070789 ⟸ ENSRNOT00000080799

Ensembl Acc Id:

ENSRNOP00000094182 ⟸ ENSRNOT00000113262

RefSeq Acc Id:	XP_063136976 ⟸ XM_063280906
- Peptide Label:	isoform X5

Protein Domains

Ig-like

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-A0A0G2KAU3-F1-model_v2	AlphaFold	A0A0G2KAU3	1-399	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
BioCyc Gene	G2FUF-61047	BioCyc
Ensembl Genes	ENSRNOG00000058538	Ensembl
	ENSRNOG00000062358	UniProtKB/TrEMBL
	ENSRNOG00000066254	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000078512.2	UniProtKB/TrEMBL
	ENSRNOT00000080799.2	UniProtKB/TrEMBL
	ENSRNOT00000113262.1	UniProtKB/TrEMBL
Gene3D-CATH	2.60.40.10	UniProtKB/TrEMBL
InterPro	Ig-like_dom	UniProtKB/TrEMBL
	Ig-like_dom_sf	UniProtKB/TrEMBL
	Ig-like_fold	UniProtKB/TrEMBL
	Ig-like_Receptors_ImmuneReg	UniProtKB/TrEMBL
	Ig_sub	UniProtKB/TrEMBL
	Ig_sub2	UniProtKB/TrEMBL
	Immunoglobulin	UniProtKB/TrEMBL
KEGG Report	rno:100912456	UniProtKB/TrEMBL
NCBI Gene	LOC100912456	ENTREZGENE
PANTHER	LEUKOCYTE IMMUNOGLOBULIN-LIKE RECEPTOR SUBFAMILY B MEMBER 3-RELATED	UniProtKB/TrEMBL
	LEUKOCYTE IMMUNOGLOBULIN-LIKE RECEPTOR SUBFAMILY B MEMBER 4	UniProtKB/TrEMBL
	MHC CLASS I NK CELL RECEPTOR	UniProtKB/TrEMBL
Pfam	Ig_2	UniProtKB/TrEMBL
	PF00047	UniProtKB/TrEMBL
PhenoGen	Lilrb1	PhenoGen
PROSITE	IG_LIKE	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000058538	RatGTEx
	ENSRNOG00000062358	RatGTEx
	ENSRNOG00000066254	RatGTEx
SMART	IGc2	UniProtKB/TrEMBL
	SM00409	UniProtKB/TrEMBL
Superfamily-SCOP	SSF48726	UniProtKB/TrEMBL
UniProt	A0A0G2JYU1	ENTREZGENE, UniProtKB/TrEMBL
	A0A0G2KAU3	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6AZE5	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2022-06-02	Lilrb1	leukocyte immunoglobulin like receptor B1	Lilrb1	leukocyte immunoglobulin like receptor B1	Data merged from RGD:149736366	737654	PROVISIONAL
2021-08-09	Lilrb1	leukocyte immunoglobulin like receptor B1			Symbol and Name status set to provisional	45752	PROVISIONAL
2021-03-09	Lilrb1	leukocyte immunoglobulin like receptor B1	LOC690948	similar to paired-Ig-like receptor A11	Data merged from RGD:1589833	737654	PROVISIONAL
2016-01-20	Lilrb1	leukocyte immunoglobulin like receptor B1	Lilrb1	leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 1	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2015-06-30	Lilrb1	leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 1	LOC100912456	leukocyte immunoglobulin-like receptor subfamily B member 3-like	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2012-07-05	LOC100912456	leukocyte immunoglobulin-like receptor subfamily B member 3-like			Symbol and Name status set to provisional	70820	PROVISIONAL
2006-11-20	LOC690948	similar to paired-Ig-like receptor A11			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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