Slc25a10 (solute carrier family 25 member 10) - Rat Genome Database

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Gene: Slc25a10 (solute carrier family 25 member 10) Rattus norvegicus
Analyze
Symbol: Slc25a10
Name: solute carrier family 25 member 10
RGD ID: 621430
Description: Enables malate transmembrane transporter activity and phosphate transmembrane transporter activity. Involved in malate transport and phosphate ion transport. Predicted to be located in mitochondrion and nucleoplasm. Predicted to be active in mitochondrial inner membrane. Human ortholog(s) of this gene implicated in mitochondrial DNA depletion syndrome 19. Orthologous to human SLC25A10 (solute carrier family 25 member 10); INTERACTS WITH (+)-schisandrin B; 17beta-estradiol; 2,2,2-tetramine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: Dic; dicarboxylate transporter), member 10; MGC93224; mitochondrial dicarboxylate carrier; solute carrier family 25 (mitochondrial carrier; solute carrier family 25 (mitochondrial carrier, dicarboxylate transporter), member 10; solute carrier family 25 (mitochondrial carrier; dicarboxylate transporter), member 10
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr810106,264,396 - 106,271,895 (+)NCBIGRCr8
mRatBN7.210105,765,598 - 105,775,159 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl10105,765,372 - 105,773,556 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx10110,870,210 - 110,877,669 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.010110,333,241 - 110,340,700 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.010105,686,517 - 105,693,978 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.010109,665,682 - 109,674,782 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl10109,665,682 - 109,673,143 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.010109,258,950 - 109,268,049 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.410109,877,811 - 109,885,272 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.110109,892,314 - 109,899,776 (+)NCBI
Celera10104,309,989 - 104,317,450 (+)NCBICelera
Cytogenetic Map10q32.3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-schisandrin B  (EXP)
(1->4)-beta-D-glucan  (ISO)
1,1-dichloroethene  (ISO)
1,2-dimethylhydrazine  (ISO)
17alpha-ethynylestradiol  (ISO)
17beta-estradiol  (EXP,ISO)
2,2,2-tetramine  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4-dibromophenyl 2,4,5-tribromophenyl ether  (ISO)
3,3',4,4',5-pentachlorobiphenyl  (EXP)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
3H-1,2-dithiole-3-thione  (EXP)
4,4'-diaminodiphenylmethane  (ISO)
4,4'-sulfonyldiphenol  (EXP,ISO)
4-hydroxyphenyl retinamide  (ISO)
6-propyl-2-thiouracil  (EXP)
7,12-dimethyltetraphene  (EXP)
acrylamide  (ISO)
aflatoxin B1  (EXP,ISO)
aldehydo-D-glucose  (EXP)
all-trans-retinoic acid  (ISO)
alpha-Zearalanol  (EXP)
amitrole  (EXP)
ammonium chloride  (EXP)
amphetamine  (EXP)
aristolochic acid A  (ISO)
atrazine  (ISO)
benzo[a]pyrene  (ISO)
beta-lapachone  (ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (EXP)
cadmium atom  (ISO)
cadmium dichloride  (ISO)
chlordecone  (ISO)
chlorpyrifos  (ISO)
ciguatoxin CTX1B  (ISO)
cisplatin  (EXP,ISO)
clofibrate  (ISO)
clofibric acid  (EXP)
copper atom  (ISO)
copper(0)  (ISO)
cyclosporin A  (ISO)
D-glucose  (EXP)
dexamethasone  (ISO)
dextran sulfate  (ISO)
dibutyl phthalate  (ISO)
dichloroacetic acid  (ISO)
dioxygen  (ISO)
dorsomorphin  (ISO)
endosulfan  (EXP)
enzyme inhibitor  (ISO)
epoxiconazole  (ISO)
ethanol  (ISO)
formaldehyde  (ISO)
glucose  (EXP)
glutathione  (EXP)
indometacin  (ISO)
inulin  (ISO)
isoprenaline  (ISO)
malonic acid  (EXP)
methimazole  (EXP)
monosodium L-glutamate  (ISO)
N,N-diethyl-m-toluamide  (EXP)
N-nitrosodiethylamine  (EXP)
N-Nitrosopyrrolidine  (ISO)
obeticholic acid  (ISO)
paracetamol  (EXP,ISO)
perfluorooctane-1-sulfonic acid  (EXP,ISO)
perfluorooctanoic acid  (EXP)
permethrin  (EXP)
PhIP  (EXP)
pirinixic acid  (ISO)
pregnenolone 16alpha-carbonitrile  (EXP)
progesterone  (ISO)
propiconazole  (EXP)
Pyridostigmine bromide  (EXP)
raloxifene  (EXP)
resveratrol  (EXP)
S-(1,2-dichlorovinyl)-L-cysteine  (EXP)
SB 431542  (ISO)
sodium arsenite  (ISO)
sodium fluoride  (ISO)
streptozocin  (EXP)
sulfadimethoxine  (EXP)
temozolomide  (ISO)
tert-butyl hydroperoxide  (EXP,ISO)
tetrachloromethane  (EXP,ISO)
tetrahydropalmatine  (ISO)
thapsigargin  (ISO)
thioacetamide  (EXP)
thiram  (ISO)
titanium dioxide  (EXP,ISO)
triphenyl phosphate  (EXP)
troglitazone  (ISO)
trovafloxacin  (ISO)
tunicamycin  (ISO)
urethane  (ISO)
valproic acid  (ISO)
vancomycin  (ISO)
vinclozolin  (EXP)
zidovudine  (ISO)

References

References - curated
# Reference Title Reference Citation
1. The sequence, bacterial expression, and functional reconstitution of the rat mitochondrial dicarboxylate transporter cloned via distant homologs in yeast and Caenorhabditis elegans. Fiermonte G, etal., J Biol Chem 1998 Sep 18;273(38):24754-9.
2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
4. Electronic Transfer of LocusLink and RefSeq Data NCBI rat LocusLink and RefSeq merged data July 26, 2002
5. Identification by bacterial expression and functional reconstitution of the yeast genomic sequence encoding the mitochondrial dicarboxylate carrier protein. Palmieri L, etal., FEBS Lett 1996 Dec 16;399(3):299-302.
6. GOA pipeline RGD automated data pipeline
7. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
8. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.
Additional References at PubMed
PMID:10567211   PMID:12865426   PMID:14651853   PMID:18614015   PMID:20538765   PMID:20949348   PMID:21630459   PMID:24625528  


Genomics

Comparative Map Data
Slc25a10
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr810106,264,396 - 106,271,895 (+)NCBIGRCr8
mRatBN7.210105,765,598 - 105,775,159 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl10105,765,372 - 105,773,556 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx10110,870,210 - 110,877,669 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.010110,333,241 - 110,340,700 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.010105,686,517 - 105,693,978 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.010109,665,682 - 109,674,782 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl10109,665,682 - 109,673,143 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.010109,258,950 - 109,268,049 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.410109,877,811 - 109,885,272 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.110109,892,314 - 109,899,776 (+)NCBI
Celera10104,309,989 - 104,317,450 (+)NCBICelera
Cytogenetic Map10q32.3NCBI
SLC25A10
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381781,712,284 - 81,721,012 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1781,712,236 - 81,721,016 (+)EnsemblGRCh38hg38GRCh38
GRCh371779,679,314 - 79,688,042 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361777,289,776 - 77,298,447 (+)NCBINCBI36Build 36hg18NCBI36
Build 341777,289,775 - 77,298,446NCBI
Celera1776,324,691 - 76,333,300 (+)NCBICelera
Cytogenetic Map17q25.3NCBI
HuRef1775,125,159 - 75,133,942 (+)NCBIHuRef
CHM1_11779,765,485 - 79,774,259 (+)NCBICHM1_1
T2T-CHM13v2.01782,629,200 - 82,637,941 (+)NCBIT2T-CHM13v2.0
Slc25a10
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3911120,382,663 - 120,391,987 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl11120,382,666 - 120,390,013 (+)EnsemblGRCm39 Ensembl
GRCm3811120,491,837 - 120,501,161 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl11120,491,840 - 120,499,187 (+)EnsemblGRCm38mm10GRCm38
MGSCv3711120,353,151 - 120,362,475 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3611120,307,962 - 120,315,256 (+)NCBIMGSCv36mm8
Celera11132,227,169 - 132,236,494 (+)NCBICelera
Cytogenetic Map11E2NCBI
cM Map1184.19NCBI
Slc25a10
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555061,385,788 - 1,397,015 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049555061,389,798 - 1,396,670 (-)NCBIChiLan1.0ChiLan1.0
SLC25A10
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21998,302,445 - 98,311,180 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan117103,202,842 - 103,211,573 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01776,171,759 - 76,180,484 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11781,874,036 - 81,882,607 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1781,875,710 - 81,882,106 (+)Ensemblpanpan1.1panPan2
SLC25A10
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.19483,864 - 491,613 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha91,086,046 - 1,093,795 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.091,077,336 - 1,085,083 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl91,077,341 - 1,084,351 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.191,102,327 - 1,110,046 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.091,228,913 - 1,236,632 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.091,307,913 - 1,315,661 (-)NCBIUU_Cfam_GSD_1.0
Slc25a10
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244056021,097,004 - 1,103,454 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365945,308,464 - 5,317,239 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365945,308,623 - 5,314,955 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SLC25A10
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl121,189,903 - 1,197,301 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1121,191,242 - 1,197,439 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
SLC25A10
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11673,643,633 - 73,652,746 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1673,643,814 - 73,655,591 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366607745,051,567 - 45,060,751 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Slc25a10
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462480110,643,123 - 10,649,651 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462480110,643,198 - 10,649,651 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Slc25a10
56 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:340
Count of miRNA genes:179
Interacting mature miRNAs:200
Transcripts:ENSRNOT00000054963
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
7387312Bw125Body weight QTL 12530.0047retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight (CMO:0000356)1064890616107211142Rat
12880384Cm107Cardiac mass QTL 1070.001heart mass (VT:0007028)heart wet weight to body weight ratio (CMO:0002408)90404397107211142Rat
1354641Bvd2Brain ventricular dilatation QTL 26.360.001brain ventricle morphology trait (VT:0000822)hydrocephalus severity score (CMO:0001881)1093223816107057807Rat
12880385Cm108Cardiac mass QTL 1080.001heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)90404397107211142Rat
2303589Bw87Body weight QTL 872body mass (VT:0001259)body weight (CMO:0000012)1081285008107211142Rat
2317029Aia19Adjuvant induced arthritis QTL 192.98joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)1066978955107211142Rat
12880396Am13Aortic mass QTL 130.001aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)1090404397107211142Rat
61449Ciaa2CIA Autoantibody QTL 27.1blood autoantibody amount (VT:0003725)calculated serum anti-type 2 collagen antibody titer (CMO:0001279)1063221094107211142Rat
12880398Kidm67Kidney mass QTL 670.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)1090404397107211142Rat
61387Bp1Blood pressure QTL 15.1arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)1051770177107211142Rat
2317039Aia6Adjuvant induced arthritis QTL 64.31joint integrity trait (VT:0010548)right rear ankle joint diameter (CMO:0002150)1066978955107211142Rat
12880395Cm109Cardiac mass QTL 1090.001heart right ventricle mass (VT:0007033)heart right ventricle weight to body weight ratio (CMO:0000914)1090404397107211142Rat
1579915Bp280Blood pressure QTL 2800.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1090404397107211142Rat
61396Bp9Blood pressure QTL 94.80.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1068420376107211142Rat
2298548Neuinf7Neuroinflammation QTL 73.4nervous system integrity trait (VT:0010566)spinal cord RT1-B protein level (CMO:0002132)1072224939107211142Rat
1302404Cia27Collagen induced arthritis QTL 272.60.0045joint integrity trait (VT:0010548)experimental arthritis severity measurement (CMO:0001459)1076452683107211142Rat
634320Niddm49Non-insulin dependent diabetes mellitus QTL 494.41blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)1088539139107211142Rat
2317754Glom25Glomerulus QTL 253.5urine protein amount (VT:0005160)urine protein level (CMO:0000591)1082685200107211142Rat
70171Cari1Carrageenan-induced inflammation QTL 14.90.0005hypodermis integrity trait (VT:0010550)inflammatory exudate volume (CMO:0001429)1053797385107211142Rat
1331791Cm31Cardiac mass QTL 313.84606heart mass (VT:0007028)heart wet weight (CMO:0000069)1029299504107211142Rat
10450498Bp384Blood pressure QTL 3840.002arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1067750049107211142Rat
4889492Pancm2Pancreatic morphology QTL 23.2pancreatic beta cell morphology trait (VT:0005217)ratio of insulin-positive cell area to total area of splenic region of pancreas (CMO:0001814)1076748906107211142Rat
6893366Bw106Body weight QTL 1060.30.47body mass (VT:0001259)body weight (CMO:0000012)1070199100107211142Rat
10450493Bp382Blood pressure QTL 3820.002arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1094759759107211142Rat
1578672Bmd16Bone mineral density QTL 166.2femur mineral mass (VT:0010011)compact volumetric bone mineral density (CMO:0001730)1096703043107057807Rat
2293646Bss25Bone structure and strength QTL 2510.960.0001femur morphology trait (VT:0000559)femur cross-sectional area (CMO:0001661)1069738412107211142Rat
2313103Bss80Bone structure and strength QTL 8020.0001tibia strength trait (VT:1000284)tibia midshaft endosteal cross-sectional area (CMO:0001716)1062057807107057807Rat
2300172Bmd57Bone mineral density QTL 579.80.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)1069738412107211142Rat
70193Mcs7Mammary carcinoma susceptibility QTL 72.38mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)1072224939107211142Rat
2313105Bss79Bone structure and strength QTL 791.80.0001tibia size trait (VT:0100001)tibia midshaft cross-sectional area (CMO:0001717)1062057807107057807Rat
61363Oia3Oil induced arthritis QTL 30.001joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1087307617107211142Rat
2292438Bp311Blood pressure QTL 311arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1076246085107211142Rat
2316949Gluco60Glucose level QTL 603.7blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)1014487011107057807Rat
2292436Bp310Blood pressure QTL 310arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1094759759107211142Rat
724530Bp149Blood pressure QTL 1490.0001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1090627439107211142Rat
1300137Bp186Blood pressure QTL 1863.57arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)1090627439107057807Rat
631538Oia5Oil induced arthritis QTL 5joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1087055121107211142Rat
1642980Bp300Blood pressure QTL 300arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1068383129107211142Rat
2293663Bss33Bone structure and strength QTL 339.340.0001femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)1069738412107211142Rat
1578663Bss18Bone structure and strength QTL 183.6femur width (VT:1000666)femoral neck width (CMO:0001695)1096703043107057807Rat


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31

Sequence


Ensembl Acc Id: ENSRNOT00000054963   ⟹   ENSRNOP00000051846
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl10105,765,979 - 105,773,556 (+)Ensembl
Rnor_6.0 Ensembl10109,665,682 - 109,673,143 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000103059   ⟹   ENSRNOP00000087842
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl10105,765,979 - 105,772,499 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000106118   ⟹   ENSRNOP00000078001
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl10105,765,372 - 105,773,556 (+)Ensembl
RefSeq Acc Id: NM_133418   ⟹   NP_596909
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr810106,264,396 - 106,271,857 (+)NCBI
mRatBN7.210105,766,060 - 105,773,521 (+)NCBI
Rnor_6.010109,665,682 - 109,673,143 (+)NCBI
Rnor_5.010109,258,950 - 109,268,049 (+)NCBI
RGSC_v3.410109,877,811 - 109,885,272 (+)RGD
Celera10104,309,989 - 104,317,450 (+)RGD
Sequence:
RefSeq Acc Id: XM_017596977   ⟹   XP_017452466
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr810106,264,660 - 106,271,895 (+)NCBI
mRatBN7.210105,766,327 - 105,775,159 (+)NCBI
Rnor_6.010109,665,923 - 109,674,782 (+)NCBI
Sequence:
RefSeq Acc Id: NP_596909   ⟸   NM_133418
- UniProtKB: O89035 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017452466   ⟸   XM_017596977
- Peptide Label: isoform X1
- UniProtKB: A0A8I5Y824 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000051846   ⟸   ENSRNOT00000054963
Ensembl Acc Id: ENSRNOP00000087842   ⟸   ENSRNOT00000103059
Ensembl Acc Id: ENSRNOP00000078001   ⟸   ENSRNOT00000106118

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-O89035-F1-model_v2 AlphaFold O89035 1-286 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13697960
Promoter ID:EPDNEW_R8484
Type:initiation region
Name:Slc25a10_1
Description:solute carrier family 25 member 10
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.010109,665,601 - 109,665,661EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:621430 AgrOrtholog
BioCyc Gene G2FUF-22425 BioCyc
Ensembl Genes ENSRNOG00000036693 Ensembl, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ENSRNOG00055032397 UniProtKB/Swiss-Prot
  ENSRNOG00060031161 UniProtKB/Swiss-Prot
  ENSRNOG00065003903 UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000054963.3 UniProtKB/Swiss-Prot
  ENSRNOT00000103059.1 UniProtKB/TrEMBL
  ENSRNOT00000106118.1 UniProtKB/TrEMBL
  ENSRNOT00055055956 UniProtKB/Swiss-Prot
  ENSRNOT00060054141 UniProtKB/Swiss-Prot
  ENSRNOT00065005726 UniProtKB/Swiss-Prot
Gene3D-CATH 1.50.40.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
IMAGE_CLONE IMAGE:7108552 IMAGE-MGC_LOAD
InterPro Mit_carrier UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Mito_Metabolite_Transporter UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Mitochondrial_sb/sol_carrier UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Mt_carrier_dom UniProtKB/TrEMBL, UniProtKB/Swiss-Prot
KEGG Report rno:170943 UniProtKB/Swiss-Prot
MGC_CLONE MGC:93224 IMAGE-MGC_LOAD
NCBI Gene 170943 ENTREZGENE
PANTHER MITOCHONDRIAL DICARBOXYLATE CARRIER UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  MITOCHONDRIAL DICARBOXYLATE CARRIER-RELATED UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Mito_carr UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Slc25a10 PhenoGen
PRINTS MTUNCOUPLING UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE SOLCAR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
RatGTEx ENSRNOG00000036693 RatGTEx
  ENSRNOG00055032397 RatGTEx
  ENSRNOG00060031161 RatGTEx
  ENSRNOG00065003903 RatGTEx
Superfamily-SCOP Mitoch_carrier UniProtKB/TrEMBL, UniProtKB/Swiss-Prot
UniProt A0A8I5Y824 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6GFJ0_RAT UniProtKB/TrEMBL
  A6HLE0_RAT UniProtKB/TrEMBL
  A6HLE1_RAT UniProtKB/TrEMBL
  DIC_RAT UniProtKB/Swiss-Prot, ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-03-09 Slc25a10  solute carrier family 25 member 10  Slc25a10  solute carrier family 25 (mitochondrial carrier; dicarboxylate transporter), member 10  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2006-03-30 Slc25a10  solute carrier family 25 (mitochondrial carrier; dicarboxylate transporter), member 10      Symbol and Name status set to approved 1299863 APPROVED
2002-08-07 Slc25a10  solute carrier family 25 (mitochondrial carrier; dicarboxylate transporter), member 10      Symbol and Name status set to provisional 70820 PROVISIONAL

RGD Curation Notes
Note Type Note Reference
gene_process participates in gluconeogenesis and ureogenesis,possibly acts as a substrate to the Krebs cycle 634162