Gene: Snora15b-2 (small nucleolar RNA, H/ACA box 15B-2) Rattus norvegicus
Analyze
Symbol:
Snora15b-2 (Ensembl: LOC120096108)
Name:
small nucleolar RNA, H/ACA box 15B-2 (Ensembl:small nucleolar RNA SNORA15)
RGD ID:
41308945
Description:
Predicted to be involved in RNA processing. Predicted to be located in nucleolus. Orthologous to human SNORA15B-2 (small nucleolar RNA, H/ACA box 15B-2).
Type:
snorna
RefSeq Status:
MODEL
Previously known as:
AABR07036010.2; LOC120096108; small nucleolar RNA SNORA15; small nucleolar RNA, H/ACA box 15; Snora15
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Latest Assembly:
GRCr8 - GRCr8 Assembly
Position:
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 5 34,131,500 - 34,131,629 (+) NCBI GRCr8 GRCr8 GRCr8 mRatBN7.2 12 26,875,761 - 26,875,891 (-) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 12 26,875,761 - 26,875,891 (-) Ensembl mRatBN7.2 Rnor_6.0 Ensembl 12 30,494,607 - 30,494,737 (-) NCBI rn6 Rnor6.0 Cytogenetic Map 12 q13 NCBI
JBrowse:
References
Genomics
Comparative Map Data
Snora15b-2 Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 5 34,131,500 - 34,131,629 (+) NCBI GRCr8 GRCr8 GRCr8 mRatBN7.2 12 26,875,761 - 26,875,891 (-) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 12 26,875,761 - 26,875,891 (-) Ensembl mRatBN7.2 Rnor_6.0 Ensembl 12 30,494,607 - 30,494,737 (-) NCBI rn6 Rnor6.0 Cytogenetic Map 12 q13 NCBI
SNORA15B-2 Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 7 65,760,052 - 65,760,186 (+) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 7 65,760,052 - 65,760,186 (+) Ensembl hg38 GRCh38 GRCh37 7 65,225,039 - 65,225,173 (+) NCBI GRCh37 GRCh37 hg19 GRCh37 Cytogenetic Map 7 q11.21 NCBI T2T-CHM13v2.0 7 66,982,185 - 66,982,319 (+) NCBI T2T-CHM13v2.0
LOC119872416 Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Dog10K_Boxer_Tasha 6 2,252,669 - 2,252,808 (+) NCBI Dog10K_Boxer_Tasha Dog10K_Boxer_Tasha ROS_Cfam_1.0 6 357,007 - 357,146 (+) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 UMICH_Zoey_3.1 6 300,767 - 300,906 (+) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 6 294,849 - 294,988 (+) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 6 466,078 - 466,217 (+) NCBI UU_Cfam_GSD_1.0 UU_Cfam_GSD_1.0
QTLs in Region (GRCr8)
2293666 Bmd38 Bone mineral density QTL 38 4.4 femur size trait (VT:1000369) femoral neck cortical cross-sectional area (CMO:0001702) 5 13731153 43590997 Rat 1578776 Stresp18 Stress response QTL 18 2.9 thymus mass (VT:0004954) thymus wet weight (CMO:0000855) 5 32751649 77751649 Rat 1576314 Eutr1 Estrogen induced uterine response QTL 1 uterus integrity trait (VT:0010575) pyometritis severity score (CMO:0002009) 5 6922282 81330203 Rat 6903306 Scl35 Serum cholesterol QTL 35 2.6 0.0073 blood cholesterol amount (VT:0000180) plasma total cholesterol level (CMO:0000585) 5 33311673 78311673 Rat 1358353 Srcrtb2 Stress Responsive Cort Basal QTL 2 3.48 0.003 blood corticosterone amount (VT:0005345) plasma corticosterone level (CMO:0001173) 5 23671493 79046465 Rat 1300117 Hrtrt8 Heart rate QTL 8 3.49 heart pumping trait (VT:2000009) heart rate (CMO:0000002) 5 8627230 52665523 Rat 7394712 Emca13 Estrogen-induced mammary cancer QTL 13 mammary gland integrity trait (VT:0010552) mammary tumor number (CMO:0000343) 5 14606078 59606078 Rat 634305 Mamtr1 Mammary tumor resistance QTL 1 0.0001 mammary gland integrity trait (VT:0010552) mammary tumor number (CMO:0000343) 5 17576633 62576633 Rat 1578774 Tcas8 Tongue tumor susceptibility QTL 8 3.47 tongue integrity trait (VT:0010553) number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950) 5 15707451 60707451 Rat 1331771 Rf35 Renal function QTL 35 4.36965 kidney blood vessel physiology trait (VT:0100012) absolute change in renal blood flow rate (CMO:0001168) 5 10019064 91770353 Rat 2312562 Pur18 Proteinuria QTL 18 2.6 0.001 urine total protein amount (VT:0000032) urine total protein excretion rate (CMO:0000756) 5 6922282 37468560 Rat 8662454 Vetf3 Vascular elastic tissue fragility QTL 3 27.4 artery integrity trait (VT:0010639) number of ruptures of the internal elastic lamina of the abdominal aorta and iliac arteries (CMO:0002562) 5 7065535 74335773 Rat 6903292 Stl28 Serum triglyceride level QTL 28 2.6 0.0073 blood triglyceride amount (VT:0002644) plasma triglyceride level (CMO:0000548) 5 33311673 78311673 Rat 1641903 Alcrsp3 Alcohol response QTL 3 response to alcohol trait (VT:0010489) duration of loss of righting reflex (CMO:0002289) 5 17486080 62486080 Rat 1578767 Stresp17 Stress response QTL 17 4.3 0.01 blood aldosterone amount (VT:0005346) plasma aldosterone level (CMO:0000551) 5 32751649 77751649 Rat 1331756 Rf34 Renal function QTL 34 4.16275 kidney blood vessel physiology trait (VT:0100012) absolute change in renal blood flow rate (CMO:0001168) 5 10019064 87027358 Rat 8552954 Pigfal14 Plasma insulin-like growth factor 1 level QTL 14 9 blood insulin-like growth factor amount (VT:0010479) plasma insulin-like growth factor 1 level (CMO:0001299) 5 26023211 71023211 Rat 2303577 Gluco47 Glucose level QTL 47 3 blood glucose amount (VT:0000188) blood glucose level (CMO:0000046) 5 16520019 61520019 Rat 1549901 Neudeg2 Neurodegradation QTL 2 4 0 nervous system integrity trait (VT:0010566) mononuclear cell count (CMO:0002119) 5 31130421 48841739 Rat 1641922 Alcrsp8 Alcohol response QTL 8 alcohol metabolism trait (VT:0015089) blood ethanol level (CMO:0000535) 5 17486080 62486080 Rat 2313085 Bss59 Bone structure and strength QTL 59 2.9 0.0001 long bone metaphysis morphology trait (VT:0000133) tibia midshaft total cross-sectional area (CMO:0001715) 5 8627230 53627230 Rat 1600358 Mamtr5 Mammary tumor resistance QTL 5 mammary gland integrity trait (VT:0010552) mammary tumor number (CMO:0000343) 5 23671493 68671493 Rat
Expression
RNA-SEQ Expression
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
alimentary part of gastrointestinal system
5
23
2
23
2
23
16
7
7
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Sequence
Ensembl Acc Id:
ENSRNOT00000089881
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 Ensembl 12 32,511,866 - 32,511,996 (-) Ensembl mRatBN7.2 Ensembl 12 26,875,761 - 26,875,891 (-) Ensembl
RefSeq Acc Id:
XR_005505350
Type:
NON-CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 5 34,131,500 - 34,131,629 (+) NCBI
Additional Information
Nomenclature History
Date
Current Symbol
Current Name
Previous Symbol
Previous Name
Description
Reference
Status
2025-07-01
Snora15b-2
small nucleolar RNA, H/ACA box 15B-2
LOC120096108
small nucleolar RNA SNORA15
Nomenclature updated to reflect human and mouse nomenclature
1299863 APPROVED
2022-06-02
LOC120096108
small nucleolar RNA SNORA15
Snora15
small nucleolar RNA, H/ACA box 15
Data merged from RGD:15008170
737654 PROVISIONAL
2021-01-27
LOC120096108
small nucleolar RNA SNORA15
Symbol and Name status set to provisional
70820 PROVISIONAL
2020-02-07
Snora15
small nucleolar RNA, H/ACA box 15
AABR07036010.2
Symbol and/or name change
19259462 PROVISIONAL
