ZDHHC20 (zDHHC palmitoyltransferase 20) - Rat Genome Database

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Pathways
Gene: ZDHHC20 (zDHHC palmitoyltransferase 20) Chlorocebus sabaeus
Analyze
Symbol: ZDHHC20
Name: zDHHC palmitoyltransferase 20 (Ensembl:zinc finger DHHC-type palmitoyltransferase 20)
RGD ID: 18711320
Description: ENCODES a protein that exhibits acyltransferase activity (inferred); palmitoyltransferase activity (inferred); protein-cysteine S-palmitoyltransferase activity (inferred); INVOLVED IN peptidyl-L-cysteine S-palmitoylation (ortholog); protein palmitoylation (ortholog); FOUND IN Golgi membrane (inferred); membrane (inferred); nucleus (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: palmitoyltransferase ZDHHC20; probable palmitoyltransferase ZDHHC20; zinc finger DHHC-type containing 20; zinc finger DHHC-type palmitoyltransferase 20
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: ChlSab1.1 - Green Monkey 1.1 Assembly
Position:
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.131,493,525 - 1,578,222 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl31,497,615 - 1,578,225 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366605743,008,252 - 43,095,505 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
JBrowse:




Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074  


Genomics

Comparative Map Data
ZDHHC20
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.131,493,525 - 1,578,222 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl31,497,615 - 1,578,225 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366605743,008,252 - 43,095,505 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
ZDHHC20
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381321,372,571 - 21,459,303 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1321,348,784 - 21,459,467 (-)Ensemblhg38GRCh38
GRCh371321,946,710 - 22,033,442 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361320,848,508 - 20,931,423 (-)NCBIBuild 36Build 36hg18NCBI36
Celera133,012,184 - 3,095,519 (-)NCBICelera
Cytogenetic Map13q12.11NCBI
HuRef132,747,786 - 2,834,898 (-)NCBIHuRef
CHM1_11321,914,527 - 22,001,317 (-)NCBICHM1_1
T2T-CHM13v2.01320,566,901 - 20,653,645 (-)NCBIT2T-CHM13v2.0
Zdhhc20
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391458,070,159 - 58,128,288 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1458,070,160 - 58,127,733 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm381457,832,702 - 57,890,831 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1457,832,703 - 57,890,276 (-)Ensemblmm10GRCm38
MGSCv371458,451,539 - 58,509,099 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361456,786,812 - 56,844,372 (-)NCBIMGSCv36mm8
Celera1455,629,237 - 55,686,818 (-)NCBICelera
Cytogenetic Map14C3NCBI
cM Map1430.51NCBI
Zdhhc20
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81536,095,624 - 36,154,546 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1536,098,282 - 36,154,532 (-)EnsemblGRCr8
mRatBN7.21531,980,057 - 32,039,006 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1531,983,155 - 32,038,989 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1533,974,475 - 34,030,316 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01535,125,145 - 35,180,978 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01533,383,227 - 33,439,059 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Dahl_SR_JrHsd1534,817,470 - 34,873,297 (-)NCBIDahl_SR_JrHsd
Lyon_Normotensive1534,522,124 - 34,577,953 (-)NCBILyon_Normotensive
Lyon_Hypertensive1534,628,692 - 34,684,521 (-)NCBILyon_Hypertensive
F344_StmMcwi1533,814,157 - 33,869,988 (-)NCBIF344_StmMcwi
Rnor_6.01538,108,886 - 38,165,765 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1538,109,301 - 38,165,746 (-)Ensemblrn6Rnor6.0
Rnor_5.01541,949,396 - 42,006,806 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41536,879,173 - 36,934,987 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1531,693,816 - 31,749,283 (-)NCBICelera
RGSC_v3.11536,896,444 - 36,950,696 (-)NCBI
Cytogenetic Map15p12NCBI
Zdhhc20
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554971,913,802 - 1,948,356 (-)Ensembl
ChiLan1.0NW_0049554971,913,802 - 1,948,356 (-)NCBIChiLan1.0ChiLan1.0
ZDHHC20
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21420,975,050 - 21,059,906 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11312,088,179 - 12,173,071 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0132,671,177 - 2,756,033 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11320,978,261 - 21,063,044 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1320,978,261 - 21,063,044 (-)EnsemblpanPan2panpan1.1
ZDHHC20
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12516,883,185 - 16,960,907 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2516,883,101 - 16,958,060 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha2516,979,645 - 17,057,561 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.02517,019,201 - 17,097,143 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2517,019,077 - 17,091,753 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12516,893,646 - 16,971,779 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02516,904,652 - 16,982,548 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02516,961,192 - 17,039,111 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Zdhhc20
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404945118,954,279 - 119,032,096 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936720502,036 - 574,390 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_004936720501,835 - 576,849 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ZDHHC20
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl111,328,110 - 1,405,872 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.1111,326,646 - 1,405,867 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.211457,945 - 513,694 (-)NCBISscrofa10.2Sscrofa10.2susScr3
Zdhhc20
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462477616,313,351 - 16,376,145 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_00462477616,313,233 - 16,381,004 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
Zdhhc20
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v11266,938,465 - 66,995,828 (+)NCBIRrattus_CSIRO_v1

Variants

.
Variants in ZDHHC20
2093 total Variants

Expression

RNA-SEQ Expression

ectoderm
endocrine system
hemolymphoid system
mesenchyme
mesoderm
nervous system
reproductive system
76 36 20 36 36 60 20

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_008021693 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008021694 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008021695 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008021696 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008021697 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008021698 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008021699 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008021700 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008021701 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008021702 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008021703 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008021704 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008021705 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_037986914 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_037986915 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_037986916 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_073012815 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_073012839 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005236557 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005236558 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005236559 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JBLKOC010000003 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSCSAT00000016153   ⟹   ENSCSAP00000014074
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.1 Ensembl31,497,615 - 1,578,225 (-)Ensembl
RefSeq Acc Id: XM_008021693   ⟹   XP_008019884
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.131,497,320 - 1,578,222 (-)NCBI
Vero_WHO_p1.0NW_02366605743,008,252 - 43,095,505 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008021694   ⟹   XP_008019885
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.131,497,320 - 1,578,222 (-)NCBI
Vero_WHO_p1.0NW_02366605743,008,252 - 43,095,505 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008021695   ⟹   XP_008019886
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.131,497,320 - 1,578,222 (-)NCBI
Vero_WHO_p1.0NW_02366605743,008,252 - 43,095,505 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008021696   ⟹   XP_008019887
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.131,497,320 - 1,578,222 (-)NCBI
Vero_WHO_p1.0NW_02366605743,008,253 - 43,095,505 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008021697   ⟹   XP_008019888
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.131,497,320 - 1,578,222 (-)NCBI
Vero_WHO_p1.0NW_02366605743,008,255 - 43,095,505 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008021698   ⟹   XP_008019889
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.131,497,320 - 1,578,222 (-)NCBI
Vero_WHO_p1.0NW_02366605743,008,253 - 43,095,505 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008021699   ⟹   XP_008019890
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.131,497,320 - 1,578,222 (-)NCBI
Vero_WHO_p1.0NW_02366605743,008,255 - 43,095,505 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008021700   ⟹   XP_008019891
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.131,497,320 - 1,578,222 (-)NCBI
Vero_WHO_p1.0NW_02366605743,008,255 - 43,095,505 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008021701   ⟹   XP_008019892
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.131,493,525 - 1,578,222 (-)NCBI
Vero_WHO_p1.0NW_02366605743,008,256 - 43,095,505 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008021702   ⟹   XP_008019893
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
ChlSab1.131,493,525 - 1,578,222 (-)NCBI
Vero_WHO_p1.0NW_02366605743,008,255 - 43,095,505 (+)NCBI
Sequence:
RefSeq Acc Id: XM_037986914   ⟹   XP_037842842
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_02366605743,008,252 - 43,095,505 (+)NCBI
RefSeq Acc Id: XM_037986915   ⟹   XP_037842843
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_02366605743,008,252 - 43,095,505 (+)NCBI
RefSeq Acc Id: XM_037986916   ⟹   XP_037842844
Type: CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_02366605743,008,253 - 43,095,505 (+)NCBI
RefSeq Acc Id: XR_005236557
Type: NON-CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_02366605743,008,253 - 43,095,505 (+)NCBI
RefSeq Acc Id: XR_005236558
Type: NON-CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_02366605743,008,253 - 43,095,505 (+)NCBI
RefSeq Acc Id: XR_005236559
Type: NON-CODING
Position:
Green Monkey AssemblyChrPosition (strand)Source
Vero_WHO_p1.0NW_02366605743,008,256 - 43,095,505 (+)NCBI
RefSeq Acc Id: XP_008019893   ⟸   XM_008021702
- Peptide Label: isoform X13
- UniProtKB: A0A0D9RZN5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_008019892   ⟸   XM_008021701
- Peptide Label: isoform X12
- UniProtKB: A0A0D9RZN5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_008019891   ⟸   XM_008021700
- Peptide Label: isoform X10
- UniProtKB: A0A0D9RZN5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_008019890   ⟸   XM_008021699
- Peptide Label: isoform X9
- UniProtKB: A0A0D9RZN5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_008019888   ⟸   XM_008021697
- Peptide Label: isoform X6
- UniProtKB: A0A0D9RZN5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_008019886   ⟸   XM_008021695
- Peptide Label: isoform X3
RefSeq Acc Id: XP_008019889   ⟸   XM_008021698
- Peptide Label: isoform X7
RefSeq Acc Id: XP_008019885   ⟸   XM_008021694
- Peptide Label: isoform X2
RefSeq Acc Id: XP_008019887   ⟸   XM_008021696
- Peptide Label: isoform X5
RefSeq Acc Id: XP_008019884   ⟸   XM_008021693
- Peptide Label: isoform X1
Ensembl Acc Id: ENSCSAP00000014074   ⟸   ENSCSAT00000016153
RefSeq Acc Id: XP_037842843   ⟸   XM_037986915
- Peptide Label: isoform X8
RefSeq Acc Id: XP_037842842   ⟸   XM_037986914
- Peptide Label: isoform X4
RefSeq Acc Id: XP_037842844   ⟸   XM_037986916
- Peptide Label: isoform X11


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCSAG00000018057 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCSAT00000016153.1 UniProtKB/TrEMBL
InterPro Palmitoyltrfase_DHHC UniProtKB/TrEMBL
  PFA4/ZDH16/20/ERF2-like UniProtKB/TrEMBL
NCBI Gene ZDHHC20 ENTREZGENE
PANTHER PALMITOYLTRANSFERASE ZDHHC16 UniProtKB/TrEMBL
Pfam DHHC UniProtKB/TrEMBL
PROSITE DHHC UniProtKB/TrEMBL
UniProt A0A0D9RZN5 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2025-03-12 ZDHHC20  zDHHC palmitoyltransferase 20  ZDHHC20  zinc finger DHHC-type palmitoyltransferase 20  Symbol and/or name change 5135510 APPROVED