ZDHHC20 (zinc finger DHHC-type palmitoyltransferase 20) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: ZDHHC20 (zinc finger DHHC-type palmitoyltransferase 20) Canis lupus familiaris
Analyze
Symbol: ZDHHC20
Name: zinc finger DHHC-type palmitoyltransferase 20
RGD ID: 12197184
Description: ENCODES a protein that exhibits acyltransferase activity (inferred); palmitoyltransferase activity (inferred); protein-cysteine S-palmitoyltransferase activity (inferred); INVOLVED IN positive regulation by host of viral process (inferred); ASSOCIATED WITH genetic disease (ortholog); FOUND IN Golgi apparatus (inferred); Golgi membrane (inferred); intracellular membrane-bounded organelle (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: palmitoyltransferase ZDHHC20; probable palmitoyltransferase ZDHHC20; zinc finger DHHC-type containing 20
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12516,883,185 - 16,960,907 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2516,883,101 - 16,958,060 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2516,979,645 - 17,057,561 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02517,019,201 - 17,097,143 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2517,019,077 - 17,091,753 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12516,893,646 - 16,971,779 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02516,904,652 - 16,982,548 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02516,961,192 - 17,039,111 (+)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
ZDHHC20
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12516,883,185 - 16,960,907 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2516,883,101 - 16,958,060 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2516,979,645 - 17,057,561 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02517,019,201 - 17,097,143 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2517,019,077 - 17,091,753 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12516,893,646 - 16,971,779 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02516,904,652 - 16,982,548 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02516,961,192 - 17,039,111 (+)NCBIUU_Cfam_GSD_1.0
ZDHHC20
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381321,372,571 - 21,459,303 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1321,348,784 - 21,459,370 (-)EnsemblGRCh38hg38GRCh38
GRCh371321,946,710 - 22,033,442 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361320,848,508 - 20,931,423 (-)NCBINCBI36Build 36hg18NCBI36
Celera133,012,184 - 3,095,519 (-)NCBICelera
Cytogenetic Map13q12.11NCBI
HuRef132,747,786 - 2,834,898 (-)NCBIHuRef
CHM1_11321,914,527 - 22,001,317 (-)NCBICHM1_1
T2T-CHM13v2.01320,566,901 - 20,653,645 (-)NCBIT2T-CHM13v2.0
Zdhhc20
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391458,070,159 - 58,128,288 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1458,070,160 - 58,127,733 (-)EnsemblGRCm39 Ensembl
GRCm381457,832,702 - 57,890,831 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1457,832,703 - 57,890,276 (-)EnsemblGRCm38mm10GRCm38
MGSCv371458,451,539 - 58,509,099 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361456,786,812 - 56,844,372 (-)NCBIMGSCv36mm8
Celera1455,629,237 - 55,686,818 (-)NCBICelera
Cytogenetic Map14C3NCBI
cM Map1430.51NCBI
Zdhhc20
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81536,095,624 - 36,154,546 (-)NCBIGRCr8
mRatBN7.21531,980,057 - 32,039,006 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1531,983,155 - 32,038,989 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1533,974,475 - 34,030,316 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01535,125,145 - 35,180,978 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01533,383,227 - 33,439,059 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01538,108,886 - 38,165,765 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1538,109,301 - 38,165,746 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01541,949,396 - 42,006,806 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41536,879,173 - 36,934,987 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11536,896,444 - 36,950,696 (-)NCBI
Celera1531,693,816 - 31,749,283 (-)NCBICelera
Cytogenetic Map15p12NCBI
Zdhhc20
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554971,913,802 - 1,948,356 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554971,913,802 - 1,948,356 (-)NCBIChiLan1.0ChiLan1.0
ZDHHC20
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21420,975,050 - 21,059,906 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11312,088,179 - 12,173,071 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0132,671,177 - 2,756,033 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11320,978,261 - 21,063,044 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1320,978,261 - 21,063,044 (-)Ensemblpanpan1.1panPan2
Zdhhc20
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404945118,954,279 - 119,032,096 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936720502,036 - 574,390 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936720501,835 - 576,849 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ZDHHC20
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl111,328,110 - 1,405,872 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1111,326,646 - 1,405,867 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.211457,945 - 513,694 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ZDHHC20
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.131,493,525 - 1,578,222 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl31,497,615 - 1,578,225 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605743,008,252 - 43,095,505 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Zdhhc20
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462477616,313,351 - 16,376,145 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462477616,313,233 - 16,381,004 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in ZDHHC20
773 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium 5 13 5 6 11 8 9 2
Low 5 9 6 1 6 6 1 1 4
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005635550 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005635551 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_014107410 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038435079 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038435080 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038510054 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038510055 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038573488 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038573489 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038637786 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038637787 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001314469 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001314471 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001314472 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001314473 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001314475 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001314476 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001314477 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_002619439 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_002619441 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_002619442 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_002619443 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005301645 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005301646 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005301647 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005301648 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005301649 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005301651 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005301652 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005301653 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005301654 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005301655 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005344644 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005344645 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005344646 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005344647 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005344648 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005344649 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005344650 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005344651 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005344652 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005344653 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005378484 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005378485 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005378486 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005378487 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005378488 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005378489 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005378490 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005378491 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005378492 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005378493 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005412367 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005412368 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005412369 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005412370 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005412371 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005412372 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005412373 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005412374 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005412375 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005412376 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000025 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000271 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000064 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000302 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000025 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSCAFT00000011511   ⟹   ENSCAFP00000010668
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl2516,883,101 - 16,950,726 (+)Ensembl
RefSeq Acc Id: ENSCAFT00000038556   ⟹   ENSCAFP00000034298
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl2516,883,101 - 16,958,060 (+)Ensembl
RefSeq Acc Id: ENSCAFT00000064283   ⟹   ENSCAFP00000054978
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl2516,883,101 - 16,954,103 (+)Ensembl
RefSeq Acc Id: ENSCAFT00000067177   ⟹   ENSCAFP00000055485
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl2516,917,763 - 16,953,752 (+)Ensembl
RefSeq Acc Id: ENSCAFT00000068182   ⟹   ENSCAFP00000051695
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl2516,883,101 - 16,954,103 (+)Ensembl
RefSeq Acc Id: ENSCAFT00000071168   ⟹   ENSCAFP00000043885
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl2516,883,101 - 16,954,103 (+)Ensembl
RefSeq Acc Id: ENSCAFT00000077341   ⟹   ENSCAFP00000051770
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl2516,883,101 - 16,954,103 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845036548   ⟹   ENSCAFP00845028602
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl2517,019,077 - 17,091,753 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845036653   ⟹   ENSCAFP00845028689
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl2517,019,077 - 17,091,753 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845036750   ⟹   ENSCAFP00845028772
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl2517,019,077 - 17,091,753 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845036868   ⟹   ENSCAFP00845028866
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl2517,019,077 - 17,090,327 (+)Ensembl
RefSeq Acc Id: XM_005635551   ⟹   XP_005635608
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.12516,883,195 - 16,950,726 (+)NCBI
Dog10K_Boxer_Tasha2516,979,645 - 17,047,172 (+)NCBI
Sequence:
RefSeq Acc Id: XM_014107410   ⟹   XP_013962885
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.12516,883,192 - 16,957,230 (+)NCBI
Dog10K_Boxer_Tasha2516,979,645 - 17,053,884 (+)NCBI
Sequence:
RefSeq Acc Id: XM_038435079   ⟹   XP_038291007
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02517,019,201 - 17,093,466 (+)NCBI
RefSeq Acc Id: XM_038435080   ⟹   XP_038291008
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02517,019,201 - 17,086,754 (+)NCBI
RefSeq Acc Id: XM_038510054   ⟹   XP_038365982
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12516,893,646 - 16,967,755 (+)NCBI
RefSeq Acc Id: XM_038510055   ⟹   XP_038365983
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12516,893,646 - 16,961,272 (+)NCBI
RefSeq Acc Id: XM_038573488   ⟹   XP_038429416
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.02516,961,192 - 17,035,432 (+)NCBI
RefSeq Acc Id: XM_038573489   ⟹   XP_038429417
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.02516,961,192 - 17,028,720 (+)NCBI
RefSeq Acc Id: XM_038637786   ⟹   XP_038493714
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02516,904,652 - 16,978,868 (+)NCBI
RefSeq Acc Id: XM_038637787   ⟹   XP_038493715
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02516,904,652 - 16,972,162 (+)NCBI
RefSeq Acc Id: XR_001314469
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.12516,883,192 - 16,960,907 (+)NCBI
Dog10K_Boxer_Tasha2516,979,645 - 17,057,561 (+)NCBI
Sequence:
RefSeq Acc Id: XR_001314471
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.12516,883,192 - 16,960,907 (+)NCBI
Dog10K_Boxer_Tasha2516,979,645 - 17,057,561 (+)NCBI
Sequence:
RefSeq Acc Id: XR_001314472
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.12516,883,194 - 16,960,907 (+)NCBI
Dog10K_Boxer_Tasha2516,979,645 - 17,057,561 (+)NCBI
Sequence:
RefSeq Acc Id: XR_001314475
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.12516,883,186 - 16,960,907 (+)NCBI
Dog10K_Boxer_Tasha2516,979,645 - 17,057,561 (+)NCBI
Sequence:
RefSeq Acc Id: XR_001314476
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.12516,883,187 - 16,960,907 (+)NCBI
Dog10K_Boxer_Tasha2516,979,645 - 17,057,561 (+)NCBI
Sequence:
RefSeq Acc Id: XR_001314477
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.12516,883,186 - 16,960,907 (+)NCBI
Dog10K_Boxer_Tasha2516,979,645 - 17,057,561 (+)NCBI
Sequence:
RefSeq Acc Id: XR_002619439
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.12516,883,185 - 16,960,907 (+)NCBI
Dog10K_Boxer_Tasha2516,979,645 - 17,057,561 (+)NCBI
Sequence:
RefSeq Acc Id: XR_002619441
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.12516,883,185 - 16,960,907 (+)NCBI
Dog10K_Boxer_Tasha2516,979,645 - 17,057,561 (+)NCBI
Sequence:
RefSeq Acc Id: XR_002619442
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.12516,891,445 - 16,960,907 (+)NCBI
Dog10K_Boxer_Tasha2516,987,857 - 17,057,561 (+)NCBI
Sequence:
RefSeq Acc Id: XR_002619443
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.12516,883,187 - 16,960,907 (+)NCBI
Dog10K_Boxer_Tasha2516,979,645 - 17,057,561 (+)NCBI
Sequence:
RefSeq Acc Id: XR_005301645
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02517,019,201 - 17,097,143 (+)NCBI
RefSeq Acc Id: XR_005301646
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02517,019,201 - 17,097,143 (+)NCBI
RefSeq Acc Id: XR_005301647
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02517,019,201 - 17,097,143 (+)NCBI
RefSeq Acc Id: XR_005301648
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02517,019,201 - 17,097,143 (+)NCBI
RefSeq Acc Id: XR_005301649
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02517,019,201 - 17,097,143 (+)NCBI
RefSeq Acc Id: XR_005301651
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02517,019,201 - 17,097,143 (+)NCBI
RefSeq Acc Id: XR_005301652
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02517,019,201 - 17,097,143 (+)NCBI
RefSeq Acc Id: XR_005301653
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02517,019,201 - 17,097,143 (+)NCBI
RefSeq Acc Id: XR_005301654
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02517,027,412 - 17,097,143 (+)NCBI
RefSeq Acc Id: XR_005301655
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02517,019,201 - 17,097,143 (+)NCBI
RefSeq Acc Id: XR_005344644
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12516,893,646 - 16,971,779 (+)NCBI
RefSeq Acc Id: XR_005344645
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12516,893,646 - 16,971,779 (+)NCBI
RefSeq Acc Id: XR_005344646
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12516,893,646 - 16,971,779 (+)NCBI
RefSeq Acc Id: XR_005344647
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12516,893,646 - 16,971,779 (+)NCBI
RefSeq Acc Id: XR_005344648
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12516,893,646 - 16,971,779 (+)NCBI
RefSeq Acc Id: XR_005344649
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12516,893,646 - 16,971,779 (+)NCBI
RefSeq Acc Id: XR_005344650
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12516,893,646 - 16,971,779 (+)NCBI
RefSeq Acc Id: XR_005344651
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12516,893,646 - 16,971,779 (+)NCBI
RefSeq Acc Id: XR_005344652
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12516,901,816 - 16,971,779 (+)NCBI
RefSeq Acc Id: XR_005344653
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12516,893,646 - 16,971,779 (+)NCBI
RefSeq Acc Id: XR_005378484
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.02516,961,192 - 17,039,111 (+)NCBI
RefSeq Acc Id: XR_005378485
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.02516,961,192 - 17,039,111 (+)NCBI
RefSeq Acc Id: XR_005378486
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.02516,961,192 - 17,039,111 (+)NCBI
RefSeq Acc Id: XR_005378487
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.02516,961,192 - 17,039,111 (+)NCBI
RefSeq Acc Id: XR_005378488
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.02516,961,192 - 17,039,111 (+)NCBI
RefSeq Acc Id: XR_005378489
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.02516,961,192 - 17,039,111 (+)NCBI
RefSeq Acc Id: XR_005378490
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.02516,961,192 - 17,039,111 (+)NCBI
RefSeq Acc Id: XR_005378491
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.02516,961,192 - 17,039,111 (+)NCBI
RefSeq Acc Id: XR_005378492
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.02516,969,382 - 17,039,111 (+)NCBI
RefSeq Acc Id: XR_005378493
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.02516,961,192 - 17,039,111 (+)NCBI
RefSeq Acc Id: XR_005412367
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02516,904,652 - 16,982,548 (+)NCBI
RefSeq Acc Id: XR_005412368
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02516,904,652 - 16,982,548 (+)NCBI
RefSeq Acc Id: XR_005412369
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02516,904,652 - 16,982,548 (+)NCBI
RefSeq Acc Id: XR_005412370
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02516,904,652 - 16,982,548 (+)NCBI
RefSeq Acc Id: XR_005412371
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02516,904,652 - 16,982,548 (+)NCBI
RefSeq Acc Id: XR_005412372
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02516,904,652 - 16,982,548 (+)NCBI
RefSeq Acc Id: XR_005412373
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02516,904,652 - 16,982,548 (+)NCBI
RefSeq Acc Id: XR_005412374
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02516,904,652 - 16,982,548 (+)NCBI
RefSeq Acc Id: XR_005412375
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02516,912,845 - 16,982,548 (+)NCBI
RefSeq Acc Id: XR_005412376
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02516,904,652 - 16,982,548 (+)NCBI
RefSeq Acc Id: XP_013962885   ⟸   XM_014107410
- Peptide Label: isoform X1
- UniProtKB: A0A8C0LNL5 (UniProtKB/TrEMBL),   A0A8C0P9B3 (UniProtKB/TrEMBL),   A0A8I3PF12 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005635608   ⟸   XM_005635551
- Peptide Label: isoform X2
- UniProtKB: A0A8C0PJ41 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCAFP00000054978   ⟸   ENSCAFT00000064283
RefSeq Acc Id: ENSCAFP00000010668   ⟸   ENSCAFT00000011511
RefSeq Acc Id: ENSCAFP00000051770   ⟸   ENSCAFT00000077341
RefSeq Acc Id: ENSCAFP00000034298   ⟸   ENSCAFT00000038556
RefSeq Acc Id: ENSCAFP00000051695   ⟸   ENSCAFT00000068182
RefSeq Acc Id: ENSCAFP00000055485   ⟸   ENSCAFT00000067177
RefSeq Acc Id: ENSCAFP00000043885   ⟸   ENSCAFT00000071168
RefSeq Acc Id: XP_038365982   ⟸   XM_038510054
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038365983   ⟸   XM_038510055
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038493714   ⟸   XM_038637786
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038493715   ⟸   XM_038637787
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038291007   ⟸   XM_038435079
- Peptide Label: isoform X1
- UniProtKB: A0A8C0LNL5 (UniProtKB/TrEMBL),   A0A8C0P9B3 (UniProtKB/TrEMBL),   A0A8I3PF12 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038291008   ⟸   XM_038435080
- Peptide Label: isoform X2
- UniProtKB: A0A8C0PJ41 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038429416   ⟸   XM_038573488
- Peptide Label: isoform X1
- UniProtKB: A0A8C0LNL5 (UniProtKB/TrEMBL),   A0A8C0P9B3 (UniProtKB/TrEMBL),   A0A8I3PF12 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038429417   ⟸   XM_038573489
- Peptide Label: isoform X2
- UniProtKB: A0A8C0PJ41 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSCAFP00845028772   ⟸   ENSCAFT00845036750
RefSeq Acc Id: ENSCAFP00845028602   ⟸   ENSCAFT00845036548
RefSeq Acc Id: ENSCAFP00845028866   ⟸   ENSCAFT00845036868
RefSeq Acc Id: ENSCAFP00845028689   ⟸   ENSCAFT00845036653
Protein Domains
Palmitoyltransferase DHHC

Promoters
RGD ID:13687739
Promoter ID:EPDNEW_C5805
Type:multiple initiation site
Name:ZDHHC20_1
Description:zinc finger DHHC-type containing 20
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.12516,883,186 - 16,883,246EPDNEW

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000007179 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00030024112 UniProtKB/TrEMBL
  ENSCAFG00040023752 UniProtKB/TrEMBL
  ENSCAFG00845020710 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000011511.4 UniProtKB/TrEMBL
  ENSCAFT00000038556.5 UniProtKB/TrEMBL
  ENSCAFT00000064283.2 UniProtKB/TrEMBL
  ENSCAFT00000068182.2 UniProtKB/TrEMBL
  ENSCAFT00000071168.2 UniProtKB/TrEMBL
  ENSCAFT00030044340.1 UniProtKB/TrEMBL
  ENSCAFT00030044354.1 UniProtKB/TrEMBL
  ENSCAFT00030044392.1 UniProtKB/TrEMBL
  ENSCAFT00030044435.1 UniProtKB/TrEMBL
  ENSCAFT00030044485.1 UniProtKB/TrEMBL
  ENSCAFT00030044513.1 UniProtKB/TrEMBL
  ENSCAFT00030044576.1 UniProtKB/TrEMBL
  ENSCAFT00030044614.1 UniProtKB/TrEMBL
  ENSCAFT00030044659.1 UniProtKB/TrEMBL
  ENSCAFT00040044207.1 UniProtKB/TrEMBL
  ENSCAFT00040044247.1 UniProtKB/TrEMBL
  ENSCAFT00040044288.1 UniProtKB/TrEMBL
  ENSCAFT00040044324.1 UniProtKB/TrEMBL
  ENSCAFT00040044426.1 UniProtKB/TrEMBL
  ENSCAFT00040044439.1 UniProtKB/TrEMBL
  ENSCAFT00040044463.1 UniProtKB/TrEMBL
  ENSCAFT00040044500.1 UniProtKB/TrEMBL
  ENSCAFT00040044523.1 UniProtKB/TrEMBL
  ENSCAFT00040044558.1 UniProtKB/TrEMBL
  ENSCAFT00845036548.1 UniProtKB/TrEMBL
  ENSCAFT00845036653.1 UniProtKB/TrEMBL
  ENSCAFT00845036750.1 UniProtKB/TrEMBL
  ENSCAFT00845036868 ENTREZGENE
  ENSCAFT00845036868.1 UniProtKB/TrEMBL
InterPro Palmitoyltrfase_DHHC UniProtKB/TrEMBL
KEGG Report cfa:486045 UniProtKB/TrEMBL
NCBI Gene ZDHHC20 ENTREZGENE
PANTHER PALMITOYLTRANSFERASE ZDHHC16 UniProtKB/TrEMBL
  PALMITOYLTRANSFERASE ZDHHC16 UniProtKB/TrEMBL
  S-ACYLTRANSFERASE UniProtKB/TrEMBL
Pfam DHHC UniProtKB/TrEMBL
PROSITE DHHC UniProtKB/TrEMBL
UniProt A0A8C0LNL5 ENTREZGENE
  A0A8C0P9B3 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0PBX1_CANLF UniProtKB/TrEMBL
  A0A8C0PDL9_CANLF UniProtKB/TrEMBL
  A0A8C0PFI2_CANLF UniProtKB/TrEMBL
  A0A8C0PH06_CANLF UniProtKB/TrEMBL
  A0A8C0PIT2_CANLF UniProtKB/TrEMBL
  A0A8C0PJ41 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0PM94_CANLF UniProtKB/TrEMBL
  A0A8C0TL14_CANLF UniProtKB/TrEMBL
  A0A8C0TL16_CANLF UniProtKB/TrEMBL
  A0A8C0TL25_CANLF UniProtKB/TrEMBL
  A0A8C0TMK8_CANLF UniProtKB/TrEMBL
  A0A8C0TN12_CANLF UniProtKB/TrEMBL
  A0A8C0TN38_CANLF UniProtKB/TrEMBL
  A0A8C0TNC5_CANLF UniProtKB/TrEMBL
  A0A8C0Z5Q2_CANLF UniProtKB/TrEMBL
  A0A8C0Z5R9_CANLF UniProtKB/TrEMBL
  A0A8I3P5K0_CANLF UniProtKB/TrEMBL
  A0A8I3P5X8_CANLF UniProtKB/TrEMBL
  A0A8I3PF12 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3PKZ8_CANLF UniProtKB/TrEMBL
  A0A8P0N9N6_CANLF UniProtKB/TrEMBL
  A0A8P0P4H9_CANLF UniProtKB/TrEMBL
  A0A8P0SQD6_CANLF UniProtKB/TrEMBL
VGNC ID VGNC:48586 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2019-10-22 ZDHHC20  zinc finger DHHC-type palmitoyltransferase 20  ZDHHC20  zinc finger DHHC-type containing 20  Symbol and/or name change 5135510 APPROVED