Advanced Search (OLGA)

Gene: POLR3A (RNA polymerase III subunit A) Chlorocebus sabaeus

Analyze

Symbol:

POLR3A

Name:

RNA polymerase III subunit A

RGD ID:

18362334

Description:

ENCODES a protein that exhibits 5'-3' RNA polymerase activity (inferred); chromatin binding (inferred); DNA binding (inferred); INVOLVED IN DNA-templated transcription (inferred); innate immune response (inferred); positive regulation of interferon-beta production (inferred); PARTICIPATES IN RNA polymerase III transcription pathway; ASSOCIATED WITH Desbuquois dysplasia (ortholog); genetic disease (ortholog); hypomyelinating leukodystrophy 4 (ortholog); FOUND IN cytoplasm (inferred); DNA-directed RNA polymerase complex (inferred); nucleoplasm (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

DNA-directed RNA polymerase III subunit RPC1; polymerase (RNA) III (DNA directed) polypeptide A, 155kDa

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

ChlSab1.1 - Green Monkey 1.1 Assembly

Position:

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	9	53,411,869 - 53,462,773 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	9	53,411,889 - 53,464,668 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666048	13,832,883 - 13,883,800 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Desbuquois dysplasia (ISO)

genetic disease (ISO)

hypomyelinating leukodystrophy 4 (ISO)

hypomyelinating leukodystrophy 7 (ISO)

hypomyelinating leukodystrophy 8 (ISO)

leukodystrophy (ISO)

movement disease (ISO)

spastic ataxia (ISO)

Wiedemann-Rautenstrauch syndrome (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

DNA-templated transcription (IEA)

innate immune response (IEA)

positive regulation of interferon-beta production (IEA)

termination of RNA polymerase III transcription (IEA)

transcription by RNA polymerase III (IEA)

transcription initiation at RNA polymerase III promoter (IEA)

tRNA transcription by RNA polymerase III (IEA)

Cellular Component

cytoplasm (IEA)

DNA-directed RNA polymerase complex (IEA)

nucleoplasm (IEA)

nucleus (IEA)

RNA polymerase III complex (IEA)

Molecular Function

5'-3' RNA polymerase activity (IEA)

chromatin binding (IEA)

DNA binding (IEA)

DNA-directed RNA polymerase activity (IEA)

DNA/RNA hybrid binding (IEA)

magnesium ion binding (IEA)

metal ion binding (IEA)

nucleotidyltransferase activity (IEA)

protein binding (ISO)

transferase activity (IEA)

zinc ion binding (IEA)

Molecular Pathway Annotations Click to see Annotation Detail View

RNA polymerase III transcription pathway (ISO)

References

Additional References at PubMed

PMID:22301074

Genomics

Comparative Map Data

POLR3A
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	9	53,411,869 - 53,462,773 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	9	53,411,889 - 53,464,668 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666048	13,832,883 - 13,883,800 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

POLR3A
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	10	77,975,149 - 78,029,515 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	10	77,953,148 - 78,029,549 (-)	Ensembl			hg38	GRCh38
GRCh37	10	79,734,907 - 79,789,273 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	10	79,405,900 - 79,459,265 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	10	79,405,911 - 79,459,265	NCBI
Celera	10	73,021,499 - 73,075,893 (-)	NCBI		Celera
Cytogenetic Map	10	q22.3	NCBI
HuRef	10	73,729,855 - 73,784,226 (-)	NCBI		HuRef
CHM1_1	10	80,017,697 - 80,072,040 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	10	78,844,187 - 78,898,555 (-)	NCBI		T2T-CHM13v2.0

Polr3a
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	14	24,498,762 - 24,537,126 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	14	24,498,764 - 24,537,126 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	14	24,448,694 - 24,487,070 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	14	24,448,696 - 24,487,058 (-)	Ensembl			mm10	GRCm38
MGSCv37	14	25,267,916 - 25,306,268 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	14	23,281,159 - 23,319,511 (-)	NCBI		MGSCv36	mm8
Celera	14	20,823,678 - 20,861,770 (-)	NCBI		Celera
Cytogenetic Map	14	A3	NCBI
cM Map	14	14.4	NCBI

Polr3a
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	16	56,066 - 95,060 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	16	56,066 - 95,060 (-)	Ensembl				GRCr8
mRatBN7.2	16	49,178 - 88,178 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	16	49,521 - 88,172 (-)	Ensembl				mRatBN7.2
Dahl_SR_JrHsd	16	47,432 - 86,424 (-)	NCBI		Dahl_SR_JrHsd
Lyon_Normotensive	16	46,503 - 85,499 (-)	NCBI		Lyon_Normotensive
Lyon_Hypertensive	16	46,585 - 85,581 (-)	NCBI		Lyon_Hypertensive
F344_StmMcwi	16	75,097 - 114,006 (-)	NCBI		F344_StmMcwi
Rnor_6.0	16	717,821 - 756,002 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	16	716,683 - 755,990 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	16	712,735 - 750,910 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	16	4,090 - 42,301 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	16	36,720 - 74,901 (-)	NCBI		Celera
RGSC_v3.1	16	4,027 - 40,227 (-)	NCBI
Cytogenetic Map	16	p16	NCBI

Polr3a
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955437	14,446,024 - 14,483,336 (+)	Ensembl
ChiLan1.0	NW_004955437	14,446,059 - 14,483,336 (+)	NCBI	ChiLan1.0	ChiLan1.0

POLR3A
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	8	90,123,792 - 90,178,184 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	10	90,129,578 - 90,183,507 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	10	74,496,121 - 74,550,054 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	10	77,157,976 - 77,213,019 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2

POLR3A
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	4	27,834,197 - 27,883,065 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	4	27,835,612 - 27,883,436 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	4	27,959,412 - 28,008,179 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	4	28,135,868 - 28,184,686 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	4	28,135,868 - 28,184,984 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	4	28,010,348 - 28,059,559 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	4	28,209,234 - 28,258,410 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	4	28,562,062 - 28,611,378 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Polr3a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024407213	53,078,129 - 53,121,757 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936521	1,570,857 - 1,614,409 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936521	1,570,863 - 1,613,410 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

POLR3A
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	14	80,413,099 - 80,471,697 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	14	80,410,143 - 80,471,740 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	14	86,944,625 - 87,003,270 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

Polr3a
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624754	11,173,601 - 11,215,258 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624754	11,166,126 - 11,215,205 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Polr3a
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	13	609,864 - 653,600 (-)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in POLR3A
1368 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

ectoderm	endocrine system	hemolymphoid system	mesenchyme	mesoderm	nervous system	reproductive system
76	36	20	36	36	60	20

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_007962847	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JBLKOC010000009	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCSAT00000007363 ⟹ ENSCSAP00000005546

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1 Ensembl	9	53,411,889 - 53,464,668 (+)	Ensembl

RefSeq Acc Id:

XM_007962847 ⟹ XP_007961038

Type:

CODING

Position:

Green Monkey Assembly	Chr	Position (strand)	Source
ChlSab1.1	9	53,411,869 - 53,462,773 (+)	NCBI
Vero_WHO_p1.0	NW_023666048	13,832,883 - 13,883,800 (+)	NCBI

Sequence:

show sequence

TACGGTGGCCGAGAGGATACCGTAGATGTGTTAGCGGCGAGTCCAGAAGCAGCCCCAGGAGGTG
CGCGGGGCATCGTTTTTCTAATCTGGCCTCCCGAGTGGCAAGGAGACATCCCGGCAGCCGTCAT
CATGGTGAAGGAGCAGTTCCGGGAGACGGATGTGGCCAAGAAAATAAGCCACATCTGTTTTGGA
ATGAAGTCACCTGAGGAGATGCGTCAGCAGGCACACATCCAAGTTGTGAGTAAGAACCTGTACA
GCCAGGACAACCAACATGCCCCCTTGCTATATGGGGTGCTCGACCATAGGATGGGTACAAGTGA
GAAGGATCGTCCATGTGAAACCTGTGGGAAAAACTTGGCTGACTGTCTAGGCCACTATGGGTAT
ATCGACCTGGAATTGCCGTGTTTTCATGTAGGGTACTTCAGAGCAGTCATAGGCATCTTACAGA
TGATCTGCAAAACCTGCTGCCACATCATGTTGTCCCAAGAGGAGAAGAAGCAGTTTCTGGACTA
TCTAAAGAGGCCCGGCCTGACCTACCTTCAGAAGCGAGGACTGAAGAAGAAAATCTCTGACAAG
TGCCGAAAGAAAAACATCTGCCATCACTGTGGCGCTTTTAATGGTACTGTAAAGAAGTGTGGAT
TACTGAAGATAATTCATGAGAAATACAAGACCAACAAAAAAGTGGTGGATCCCATTGTATCAAA
TTTCCTCCAGTCTTTTGAAACAGCCATTGAACATAATAAAGAAGTGGAGCCTCTGCTGGGAAGG
GCACAGGAAAACTTGAATCCCTTAGTAGTTCTGAATTTATTTAAACGAATCCCAGCTGAAGATG
TTCCTCTACTTCTGATGAACCCAGAAGCCGGAAAGCCATCTGATTTGATTCTCACACGACTTTT
GGTGCCTCCTTTGTGTATCAGACCCTCCGTTGTGAGTGATTTGAAATCTGGCACCAATGAAGAT
GATCTGACAATGAAATTGACAGAAATCATTTTCCTAAACGATGTTATTAAAAAGCATCGGATCT
CAGGAGCCAAGACCCAGATGATCATGGAGGACTGGGATTTCCTGCAGCTGCAGTGTGCCCTCTA
CATTAACAGTGAGCTCTCGGGTATTCCCCTCAACATGGCACCAAAGAAGTGGACCAGAGGCTTC
GTCCAACGCCTGAAGGGAAAACAGGGTCGATTTAGAGGAAATCTCTCAGGAAAGAGAGTGGATT
TTTCTGGCAGAACAGTCATCTCTCCCGACCCCAACCTCCGGATTGATGAGGTAGCTGTGCCAGT
TCATGTGGCCAAAATTCTAACTTTTCCTGAGAAGGTAAACAAAGCAAACATCAGTTTCTTGAGG
AAACTAGTTCAAAACGGCCCCGAGGTTCACCCAGGAGCAAACTTCATTCAGCAGAGACATACAC
AGATGAAAAGGTTTTTGAAATATGGGAATCGAGAAAAGATGGCTCAAGAGCTCAAGTATGGTGA
CATCGTAGAGAGGCACCTCATTGATGGAGATGTGGTGCTCTTCAACCGGCAGCCCTCACTGCAC
AAATTGAGCATTATGGCTCATCTGGCCAGGGTCAAGCCCCACCGGACCTTCAGATTTAATGAGT
GTGTCTGTACACCCTACAATGCTGACTTTGATGGTGACGAAATGAACCTTCATCTTCCTCAAAC
AGAAGAAGCTAAAGCAGAGGCCCTTGTTCTGATGGGGACTAAAGCAAATCTTGTAACCCCGAGG
AATGGGGAACCACTGATTGCTGCTATTCAGGATTTTCTAACAGGTGCCTATCTCCTCACTCTCA
AGGACACTTTCTTTGATCGAGCCAAGGCTTGCCAAATCATTGCTTCAATACTGGTTGGCAAGGA
TGAGAAAATTAAAGTTCGCCTTCCACCGCCTACGATCCTAAAGCCTGTCACCCTGTGGACCGGA
AAGCAGATCTTCAGTGTCATCCTCAGGCCTAGCGATGACAATCCAGTGAGGGCCAACTTGCGAA
CCAAGGGCAAGCAGTACTGTGGCAAAGGGGAAGATCTCTGTGCCAATGATTCCTATGTTACAAT
TCAGAACAGTGAGTTGATGAGTGGCAGCATGGACAAAGGAACCCTAGGGTCAGGATCCAAGAAC
AATATTTTTTACATTTTGCTGCGAGACTGGGGACAGAATGAAGCTGCGGATGCCATGTCACGGC
TCGCCAGGCTGGCTCCTGTCTACCTGTCTAACCGTGGTTTCTCAATTGGGATCGGTGATGTCAC
ACCTGGCCAAGGACTGCTAAAGGCCAAGTATGAGTTGCTGAACGCCGGCTACAAGAAATGTGAT
GAGTACATCGAAGCCCTGAACACGGGCAAGCTGCAGCAGCAGCCTGGCTGCACTGCTGAGGAGA
CCCTGGAGGCACTGATCCTGAAGGAGCTGTCTGTGATCCGTGACCACGCTGGCAGCGCTTGCCT
CCGGGAGCTGGACAAGAGCAACAGCCCCCTCACCATGGCTCTGTGTGGCTCCAAAGGTTCCTTC
ATTAACATATCACAGATGATTGCCTGTGTGGGACAGCAGGCCATCAGTGGCTCTCGAGTGCCAG
ACGGCTTTGAAAACAGGTCCTTGCCTCACTTTGAAAAACACTCAAAGCTCCCAGCTGCCAAAGG
CTTTGTGGCTAATAGCTTTTATTCTGGTTTGACACCAACTGAGTTTTTCTTCCACACAATGGCC
GGCCGGGAAGGTCTAGTCGACACGGCCGTAAAGACAGCTGAAACAGGATACATGCAGCGAAGGC
TTGTCAAATCTCTTGAAGATCTTTGCTCCCAGTATGATCTGACAGTCCGAAGCTCTACTGGCGA
TATTATCCAGTTCATTTACGGAGGAGATGGCTTAGATCCTGCAGCTATGGAGGGAAAAGATGAA
CCTTTGGAGTTTAAAAGGGTTCTAGACAACATCAAAGCAGTCTTCCCGTGTCCGAGTGAGCCTG
CTCTCAGCAAAAACGAGCTGATCCTGACCACAGAGTCCATCATGAAGAAGAGTGAGTTCCTCTG
CTGCCAGGACAGTTTCCTGCAGGAAATAAAAAAATTCATTAAGGGGGTCTCTGAGAAGATCAAG
AAAACCAGAGATAAATATGGCATCAATGATAATGGCACAACAGAGCCCCGTGTGCTGTACCAGC
TGGACCGCATCACCCCCACCCAAGTAGAAAAGTTTCTGGAGACCTGTAGGGACAAGTACATGAG
GGCACAGATGGAGCCAGGTTCTGCAGTGGGCGCTCTGTGTGCCCAGAGCATTGGTGAGCCAGGC
ACCCAGATGACCCTGAAGACTTTCCACTTTGCAGGTGTGGCCTCCATGAACATCACCCTGGGCG
TGCCCCGGATTAAAGAGATCATCAATGCTTCCAAGGCCATCAGTACTCCAATTATCACAGCACA
GCTAGACAAGGATGACGACGCGGATTACGCTCGCCTCGTGAAAGGGAGAATTGAAAAAACCCTC
TTGGGAGAGATTTCCGAGTATATTGAAGAAGTGTTTCTTCCTGATGACTGCTTTATTCTCGTCA
AACTCTCCCTGGAACGGATTAGACTTCTGAGACTGGAAGTGAATGCTGAGACAGTGCGATATTC
CATCTGTACGTCCAAGCTCCGCGTGAAGCCCGGCGACGTGGCTGTTCACGGTGAGGCTGTAGTG
TGTGTCACCCCCAGAGAGAACAGCAAGAGCTCCATGTACTACGTGCTGCAGTTCCTGAAGGAAG
ATCTCCCCAAGGTGGTGGTGCAGGGCATTCCAGAGGTGTCCAGAGCTGTCATACACATTGATGA
GCAGAGTGGAAAGGAGAAGTACAAGCTTCTGGTGGAAGGTGATAACCTGCGGGCAGTCATGGCC
ACGCACGGTGTGAAGGGCACCCGAACCACCTCCAATAACACCTATGAGGTGGAGAAAACTCTGG
GCATCGAGGCTGCCCGGACAACCATCATCAATGAAATCCAGTACACCATGGTGAACCACGGCAT
GAGCATCGACAGGAGGCACGTGATGCTGCTCTCCGACCTCATGACCTACAAGGGTGAAGTCCTG
GGCATCACTAGGTTTGGCCTGGCCAAGATGAAGGAGAGTGTGCTGATGCTGGCCTCCTTTGAGA
AGACAGCTGACCATCTCTTTGACGCTGCCTACTTCGGGCAGAAGGACTCCGTGTGCGGGGTATC
TGAGTGCATCATCATGGGAATCCCAATGAACATTGGAACCGGTCTCTTCAAGCTGCTCCACAAG
GCCGACAGGGACCCGAACCCCCCCAAGAGGCCCCTGATCTTCGACACAAATGAATTCCACATCC
CCCTTGTCACATAGTCCAAGGAAAGAGGGGACCATGCCAGACCTTGACTCCTTGTCCTGTCTGC
AGCTCATGTGAAGAGTTTTGTGCTCCCTGGGACAGGGGTCCTGAGGTCCCCACCTATGCCAGCA
ATCAGAGAAGCCCCCTTGGCATCCCCAGGAGCGGCTCCTCCTCTGATAGGGTGCAGCTCACACC
AGTGACCCTGACTGTGCCATACTGCTTGGGAGAGCTGAGGGTTTTTTTGTTTGCTTGCTTGAAA
CTCAATCTATGGACGGCCCCACAGCTCCTGCACACCCTGCCTACCTGGACTTAAGGCCCAGCCA
GGTGTCATGGCCCATCCCAGCTCACTGCATACATCCATCGGCTCCCCATGGTGTCTTCACACCT
GACAGTGAACCAGGCCTGAGCCCCGCACAGGCCAGGGCACGTTCGTGGATTTTCCATTCCTTGG
TCATGCTGGAATCTCTCAATGTGACATACTCATGTAAATATTGTTACTATTATTTATTTGTTCC
AGTTGAAGGATTTGGAATTTTTGTTATTTTAGTTTTATTTTTGAAACCAAGCATCTATAGAAAC
CAAGAAAGCCAGCATGTAAGCGTCACTGGAAAAACTGGTTTAAGCAAACAGAGCCATCTGGGAT
TTGTAACTGAGCTGCAACTGTCATGAGGCCCAGGCAGCTCTGTAACATCTTTTGTAGATGCCCC
TGGCTACCCTGTTGTTTTCATCTACCTCAGACCCCTGTCATGGGGCTCTACCCTGTGACAAGAG
CCAAACCCATTCTCCATGGCCTATGGAAGCCTCACTGGAGTTTGGAGCCTGCTGCGATGGGGAT
GAGATGTTTTTTTATAGAATTATACTTACGTTCCTTGGATGATCTCTAGTTGATTTCTGAAGTT
CTGAGTTGATGCTGTTAAGGTACCTGGGGTAGCCATTGGTTCTTGGATCTGTATTAGAATGAGT
GCTTTCCCTTCATACTGATGAGATTGTGGATTAGGAATTCTTGACCTAAGTGATTTTTGGCCAG
TGGTTGGGTTTAACATTCTATTAAAATTTGTAGGTTGGGCTGGGTGCTGTGGCTCACACCTATA
ATCCCAGCACTTTGGGAGGCTGAGGAGGGTGGATCGCTTGAGCCCAGGAGTTTGAGAGCAGCCT
GGGCAACATGACAAAACCCCGTCTCTACAAAGAATACAAAAATTAGCCAGGCATGGTGGCGCAT
GCCTGTAGTCCCTGCTACTGGGGAGGCTGAGGTGGAAGGTTCATTTGAGCCTGGGAGGTGAAGG
TTGTAATGAGCCAAGATCGTGCCACTACACTCCAGGCTGGGCAACAAAGCAAGACCTTGTCTCA
AAAAAAAAAAAAAGCTTAAAAAAATTAATTAATTCTTATAAAAAATTGTAGTTTGACTTTATGA
TTTCCCTGCATCTACAAGGTAGACCTATTAACTTCTCTTGGGGTATCAGTGATGTGAAAAAATG
CCATTTTTCTTCATGTTTAACCCCCCTTTATCTTTCAGTTGAGCTAGAGCCTGGTTTAGGACAA
AGGATTAAGTTTGTTAACACTAATTCAGGGCTTCTACTTGAGACCCCATTGAGATCACTGCTTC
TCATGTAACCTGGGAAGAGCCATAAAGGGGCACCCCCCACCCCAACTGCCTTCCTGGAAGCGTG
CCTGGGAAGTAAGCTGTAGGCTTGATCTGAGCCAGGACCACTGGGATCCGTGCAAAGACCAGGG
GAGGGTAGAATTGAATCATGGGAGGGAACTCCGACACCCGTTTTCTTCTGCGGGTGACGCACAC
TTTAAATGGAAGAGAGGTTGTGGCTATAACTTGTGGCTGGGAATAATAAAGATGGCACCGCCAA
GGAGCCTCATCTTGCTTGAGTGAGTACTCAGTTGGGTGCTGCAGAGTCTTGAGTCTGTGTGAGA
CGTGTGTGATTGTGATGGGTGCGGATCAGCATATAGCACTTGGGAACAAGGCAGACTTTGGAGC
AGAATGGTTATGTGAAGGGTCACATCACCCATGGGAAATCATACGTCTTGGAGGTGCTGGTCCT
CCTCCTGGAACTGCCAGCCTTGCTAGGACTGTCAACATCAACAGCATTGCCTGGTAAACCCTAC
TGTCTGTGCTCCCCACTGTGTCCCATGACTGGTATTAAAATTCTCCCTACTATGATCATCTGCC
CTGCCCAGGCATTGGGCTTTATGCCAGCACAGAGCTCAAAGGCCAGGGAGCAGCACATCTTCAA
GCATGAGAGCTCAATCAAAGGGTTACATTTGAGTCTCTGTACCTGCTTGGAAGAAATAAAAATA
TGCGTGAATTCCA

hide sequence

Protein Sequences


Protein RefSeqs	XP_007961038	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCSAP00000005546
	ENSCSAP00000005546.1

RefSeq Acc Id:	XP_007961038 ⟸ XM_007962847
- UniProtKB:	A0A0D9RAA7 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSCSAP00000005546 ⟸ ENSCSAT00000007363

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCSAG00000009292	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCSAT00000007363.1	UniProtKB/TrEMBL
Gene3D-CATH	1.10.132.30	UniProtKB/TrEMBL
	1.10.150.390	UniProtKB/TrEMBL
	1.10.274.100	UniProtKB/TrEMBL
	2.40.40.20	UniProtKB/TrEMBL
	4.10.860.120	UniProtKB/TrEMBL
	6.10.250.2940	UniProtKB/TrEMBL
	6.20.50.80	UniProtKB/TrEMBL
	RNA polymerase ii	UniProtKB/TrEMBL
InterPro	RNA_pol_asu	UniProtKB/TrEMBL
	RNA_pol_N	UniProtKB/TrEMBL
	RNA_pol_Rpb1_1	UniProtKB/TrEMBL
	RNA_pol_Rpb1_3	UniProtKB/TrEMBL
	RNA_pol_Rpb1_3_sf	UniProtKB/TrEMBL
	RNA_pol_Rpb1_4	UniProtKB/TrEMBL
	RNA_pol_Rpb1_5	UniProtKB/TrEMBL
	RNA_pol_Rpb1_clamp_domain	UniProtKB/TrEMBL
	RNAP_III_Rpc1_C	UniProtKB/TrEMBL
	RNAP_III_RPC1_N	UniProtKB/TrEMBL
	Rpb1_funnel_sf	UniProtKB/TrEMBL
	RPC1	UniProtKB/TrEMBL
KEGG Report	csab:103215945	UniProtKB/TrEMBL
NCBI Gene	POLR3A	ENTREZGENE
PANTHER	DNA-DIRECTED RNA POLYMERASE SUBUNIT BETA' N-TERMINAL SECTION	UniProtKB/TrEMBL
	DNA-DIRECTED RNA POLYMERASE SUBUNIT BETA' N-TERMINAL SECTION	UniProtKB/TrEMBL
Pfam	RNA_pol_Rpb1_1	UniProtKB/TrEMBL
	RNA_pol_Rpb1_2	UniProtKB/TrEMBL
	RNA_pol_Rpb1_3	UniProtKB/TrEMBL
	RNA_pol_Rpb1_4	UniProtKB/TrEMBL
	RNA_pol_Rpb1_5	UniProtKB/TrEMBL
SMART	RPOLA_N	UniProtKB/TrEMBL
Superfamily-SCOP	beta and beta-prime subunits of DNA dependent RNA-polymerase	UniProtKB/TrEMBL
UniProt	A0A0D9RAA7	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

RGD Manual Annotations

Send us a Message

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

RGD Manual Annotations