Map7d2 (MAP7 domain containing 2)

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Gene: Map7d2 (MAP7 domain containing 2) Rattus norvegicus

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Symbol:

Map7d2

Name:

MAP7 domain containing 2

RGD ID:

1564852

Description:

Predicted to be involved in microtubule cytoskeleton organization. Predicted to be active in microtubule cytoskeleton. Orthologous to human MAP7D2 (MAP7 domain containing 2); INTERACTS WITH bisphenol A; Brodifacoum; fenvalerate.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

brain-enriched E-MAP-115-like protein; Brelin; LOC317508; MAP7 domain-containing protein 2; Mtap7d2; RGD1564852; similar to hypothetical protein FLJ14503

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	MAP7D2 (MAP7 domain containing 2)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther, Treefam
Mus musculus (house mouse):	Map7d2 (MAP7 domain containing 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Map7d2 (MAP7 domain containing 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	MAP7D2 (MAP7 domain containing 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	MAP7D2 (MAP7 domain containing 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Map7d2 (MAP7 domain containing 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	MAP7D2 (MAP7 domain containing 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	MAP7D2 (MAP7 domain containing 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Map7d2 (MAP7 domain containing 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Mus musculus (house mouse):	Map7d2 (MAP7 domain containing 2)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	MAP7D2 (MAP7 domain containing 2)	Alliance	DIOPT (HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	map7d2a (MAP7 domain containing 2a)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Danio rerio (zebrafish):	map7d2b (MAP7 domain containing 2b)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER)
Xenopus tropicalis (tropical clawed frog):	map7d2	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	X	39,181,091 - 39,296,814 (-)	NCBI		GRCr8
mRatBN7.2	X	35,372,453 - 35,488,073 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	X	35,372,700 - 35,488,091 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	X	36,514,297 - 36,625,464 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	X	39,977,937 - 40,089,108 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	X	35,143,980 - 35,255,149 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	X	38,400,578 - 38,467,825 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	X	38,397,261 - 38,468,360 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	X	38,706,546 - 38,777,123 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	X	56,573,552 - 56,689,427 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	X	36,028,803 - 36,139,227 (-)	NCBI		Celera
Cytogenetic Map	X	q14	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autistic disorder (ISO)

Coffin-Lowry syndrome (ISO)

developmental and epileptic encephalopathy 2 (ISO)

glycogen storage disease IXA (ISO)

Nance-Horan syndrome (ISO)

Neurodevelopmental Disorders (ISO)

Pyruvate Dehydrogenase E1 Alpha Deficiency (ISO)

syndromic X-linked intellectual disability Lubs type (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(-)-demecolcine (ISO)

17beta-estradiol (ISO)

2,2',4,4',5,5'-hexachlorobiphenyl (ISO)

2,2',5,5'-tetrachlorobiphenyl (ISO)

2,3',4,4',5-Pentachlorobiphenyl (ISO)

4,4'-sulfonyldiphenol (ISO)

Aflatoxin B2 alpha (ISO)

belinostat (ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP,ISO)

Brodifacoum (EXP)

caffeine (ISO)

calcitriol (ISO)

cisplatin (ISO)

cyclosporin A (ISO)

diquat (ISO)

dorsomorphin (ISO)

ethanol (ISO)

fenvalerate (EXP)

formaldehyde (ISO)

FR900359 (ISO)

genistein (ISO)

hydroquinone (ISO)

kojic acid (ISO)

Licochalcone B (ISO)

manganese(II) chloride (EXP)

N-methyl-4-phenylpyridinium (EXP)

panobinostat (ISO)

paracetamol (EXP,ISO)

PCB138 (ISO)

perfluorohexanesulfonic acid (ISO)

SB 431542 (ISO)

sodium arsenite (ISO)

Soman (EXP)

testosterone (ISO)

titanium dioxide (ISO)

trichostatin A (ISO)

valproic acid (ISO)

vinclozolin (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

microtubule cytoskeleton organization (IBA)

Cellular Component

microtubule cytoskeleton (IBA)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:24625528

Genomics

Comparative Map Data

Map7d2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	X	39,181,091 - 39,296,814 (-)	NCBI		GRCr8
mRatBN7.2	X	35,372,453 - 35,488,073 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	X	35,372,700 - 35,488,091 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	X	36,514,297 - 36,625,464 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	X	39,977,937 - 40,089,108 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	X	35,143,980 - 35,255,149 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	X	38,400,578 - 38,467,825 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	X	38,397,261 - 38,468,360 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	X	38,706,546 - 38,777,123 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	X	56,573,552 - 56,689,427 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	X	36,028,803 - 36,139,227 (-)	NCBI		Celera
Cytogenetic Map	X	q14	NCBI

MAP7D2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	X	20,006,713 - 20,116,907 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	X	20,006,713 - 20,116,907 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	X	20,024,831 - 20,135,025 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	X	19,935,150 - 20,044,937 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	X	24,148,899 - 24,259,048 (-)	NCBI		Celera
Cytogenetic Map	X	p22.12	NCBI
HuRef	X	17,770,131 - 17,877,650 (-)	NCBI		HuRef
CHM1_1	X	20,055,334 - 20,165,529 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	X	19,589,600 - 19,699,784 (-)	NCBI		T2T-CHM13v2.0

Map7d2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	X	158,197,488 - 158,281,954 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	X	158,197,568 - 158,281,753 (+)	Ensembl		GRCm39 Ensembl
GRCm38	X	159,414,492 - 159,498,958 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	X	159,414,572 - 159,498,757 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	X	155,852,510 - 155,936,879 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	X	154,758,683 - 154,843,052 (+)	NCBI		MGSCv36	mm8
Celera	X	142,661,499 - 142,746,251 (+)	NCBI		Celera
Cytogenetic Map	X	F4	NCBI
cM Map	X	73.45	NCBI

Map7d2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955509	450,486 - 494,290 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955509	447,053 - 568,590 (-)	NCBI	ChiLan1.0	ChiLan1.0

MAP7D2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	X	21,802,994 - 21,914,412 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	X	21,806,381 - 21,917,800 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	X	12,624,994 - 12,736,318 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	X	19,985,121 - 20,096,303 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	X	19,989,048 - 20,096,192 (-)	Ensembl	panpan1.1		panPan2

MAP7D2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	X	15,916,609 - 15,972,552 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	X	15,917,978 - 15,971,000 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
ROS_Cfam_1.0	X	15,875,385 - 15,983,930 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	X	15,875,626 - 15,983,901 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	X	15,925,054 - 16,033,552 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	X	15,932,874 - 16,041,328 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	X	15,994,670 - 16,103,414 (-)	NCBI		UU_Cfam_GSD_1.0

Map7d2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	X	9,007,408 - 9,119,000 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936624	4,087,099 - 4,147,167 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936624	4,038,854 - 4,150,495 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

MAP7D2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	X	16,327,968 - 16,422,772 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	X	16,327,718 - 16,423,546 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	X	17,593,326 - 17,690,207 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

MAP7D2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	X	18,474,073 - 18,583,545 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	X	18,473,803 - 18,583,523 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666056	20,329,801 - 20,440,783 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Map7d2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624829	4,825,277 - 4,884,460 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624829	4,821,828 - 4,948,202 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Map7d2
427 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	843
Count of miRNA genes:	307
Interacting mature miRNAs:	408
Transcripts:	ENSRNOT00000007524, ENSRNOT00000045285
Prediction methods:	Microtar, Miranda, Pita, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1598873	Memor2	Memory QTL 2	2.5		exploratory behavior trait (VT:0010471)	average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674)	X	20990947	41052531	Rat
1298071	Edpm12	Estrogen-dependent pituitary mass QTL 12	3.2		pituitary gland mass (VT:0010496)	pituitary gland wet weight (CMO:0000853)	X	2927898	47927898	Rat
2290375	Gluco34	Glucose level QTL 34	2.75		blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	X	20990947	41203591	Rat
731181	Uae27	Urinary albumin excretion QTL 27	2.7	0.0059	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	X	1	43491017	Rat
61430	Cia18	Collagen induced arthritis QTL 18	3.1		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	X	14843113	120568734	Rat
10755455	Coatc13	Coat color QTL 13		0	coat/hair pigmentation trait (VT:0010463)	pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)	7	4406000	49406000	Rat
631666	Iddm5	Insulin dependent diabetes mellitus QTL 5			blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	X	4494549	49494549	Rat
71116	Niddm16	Non-insulin dependent diabetes mellitus QTL 16	7.81		blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	X	15297802	60297802	Rat

Markers in Region

BF398264

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	X	35,389,501 - 35,389,748 (+)	MAPPER	mRatBN7.2
Rnor_6.0	X	38,414,310 - 38,414,556	NCBI	Rnor6.0
Rnor_5.0	X	38,723,592 - 38,723,838	UniSTS	Rnor5.0
RGSC_v3.4	X	56,590,595 - 56,590,841	UniSTS	RGSC3.4
Celera	X	36,042,536 - 36,042,782	UniSTS
RH 3.4 Map	X	504.1	UniSTS
Cytogenetic Map	X	q21	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
9	11	49	113	82	81	50	25	50	6	209	97	93	45	60	31

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001289778	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039099842	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039099843	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039099844	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AB266744	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473966	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ211713	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ214474	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000021	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000045285 ⟹ ENSRNOP00000042347

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	X	35,372,700 - 35,488,091 (-)	Ensembl
Rnor_6.0 Ensembl	X	38,397,261 - 38,468,360 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000108099 ⟹ ENSRNOP00000077197

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	X	35,372,700 - 35,488,091 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000110899 ⟹ ENSRNOP00000086855

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	X	35,372,700 - 35,488,091 (-)	Ensembl

RefSeq Acc Id:

NM_001289778 ⟹ NP_001276707

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	39,181,091 - 39,296,695 (-)	NCBI
mRatBN7.2	X	35,372,459 - 35,488,072 (-)	NCBI
Rnor_6.0	X	38,400,578 - 38,467,825 (-)	NCBI
Celera	X	36,028,803 - 36,139,227 (-)	NCBI

Sequence:

show sequence

ATGGAGCGCAGCGGTGGGAACGGCGCCGGAGCCAGAGCCGGAGCCCCCTCTGAGGGGGCTGCGA
AGGGCTCTTCGCTGCTGTCTGCGAAGTCCACGGAAGGGGCCACGGGGCGATTCTCGCAGTCCAC
CCCCCGGCCTACAGGAATGGATGGATTTTTAAAATCAGATGAGAGACAAAGATTAGCCAAAGAG
AGACGAGAAGAAAGAGAAAAGTGTCTGGCTGCTCGGGAACAACAGATCTTAGAGAAACAGAAAA
GAGCTAAGCTTCAGTATGAGAAACAAATTGAGGAGCGATGGAGAAAACTTGAGGAGCAGCGCCA
GCGTGAGGATCAGAAGAGGGCAGCAGTGGAAGAAAAGAGGAAGCAGAAGCTCCGGGAAGAAGAG
GAGCGTCTGGAAGCAATGATGCGCCGCTCCCTGGAGCGTACACAGCAGCTAGAGCTGAAGAAGA
AGTGCTCATGGGCAGGATCAGCAGCTTCAGGGCCTGGAGGACGTGATGGTGAATCAGAAAATAC
CCCACCCCTTCCTCTAACTTTAGCAGCCAGCATACCCCCTTCGGACACAGGGACCGCTACAGCT
GCTGCCGAGTCCACCAACGCATGTGACAAACTTTCAACATCAACCATGAATTTGCCAAAGCAGA
CGGAACCTCCTATGAGTAAACACCTGTCTTCATCCATCGTGGCAATATCTTATTCCCCAGACCG
AGCTCTCAGGAGCCCTCTCAAATCATCATACAAGTCCTCTCCAACCCGGACCACTGAGAAAAAG
AAGAATACACTTTTATCTGGTGTGGGAGATGCTGGGAAGGGAGCCATGACTGGAGGAGAGCCTT
CACAGATGGAGAAAGTGAAGAAGGGACGAGGGGCAACTTCTGTTTCTTCTGGGGGTCTTGGGTC
CCCACTGAGAAGATGCGAGCCTCCTGAAAACATTTCCAAGAGGTCATCTTCTCCTGTGAAATCC
AAGGTAACTGCAAAAACATATCCACAGTCTCCAAAGACAGTGAAGCCCACATACATAGGGTCTC
CTGTGAAGTATTACTTTCCACCCACTCCAAGTGAAGAAACACTCAAGAAGAAGGCAGAAAAAGA
GAAGAGTAATAAGGAAAAGGAAGGTGCCACTGGTCGGCAGACCACTGTTCTACCCAGAGAAGAA
ACCCTGGAGAAGCCCATGGCTGACAAGGATGCCACTGAGAAGTATGTAGCTGATAAGCATGCAA
CTGAGAAACATTCTGCCACCGGAGGGAAGGCTGAGCACAGTGCAGGAAAATCCACAGCAGGCAC
CACAGATGCAGGGGAGGCTGCAAAGATCCTAGCTGAAAAGAGACGTCAGGCTCGGCTACAGAAG
GAACAGGAGGAGCAAGAACGGCTGGAGAAGGAAGAACAAGAGAGGCTGGAAAAAGAGGAATTGA
AAAGAAAGGCAGAAGAGGAAAGGCTGCGCATAGAAAAACAAGAAGAAGAAAAGAAGCAGCAGGA
GGAAGAAGAGAAAAGAAAGGCAGAAGAGAAGGCAAAAGAGAAGGCTGAGGAGGAGCTGTTGTCA
AAAGAGGAGCAAGAAAAGGAAAAACAAGAAAAAGAAAAGAAGGAAAAAGCCATGATTGAAAAGC
AGATACAAGCTGAGAAAGAAGCAGCAGAAGCAAAGGCGCAGGATGCCGCTAAACAGATGCGTTT
AGAAAGAGAACAGATCATGCTGCAGATTGAGCAGGAACGACTGGAGAGGAAGAAGAGAATAGAT
GAAATCATGAAGAGAACAAGGAAGAGTGATGCGTCTCTAGAAGTGAAGAAGGAAGACCCCAAAG
TGGAGATTCAGCCTCTTCCAGATGTCGAAAATAAGATAAAACCAGTTGTCCCCAACAAAATAGA
AATCAATGTGTTGAACACCTGCCAGAAAGTAAATGTCTCAGAGCGTGCTGCTCCAGAAACCTTC
CCCCAAGACATTTTCTCTAATGGTCTTAAACCAGTTGGGGGACCTGTTCATCCGGATGTCCTTG
ATGGGAAGTCAAACAGTCTGGATGATTCAACTGAAGAAGTTCAATCTATGGATGTGAGTCCTGT
TTCCAAAGAAGAGCTTATCTCCATCCCAGAATTTTCACCAGTGAGTGAAATGATTCCTGGGATG
TCTCTGGATCAAAATGGAACTGGTAATGCCCGGGCACTTCAAGATATTTTAGATTTCACTGGCC
CTCCAGCATTCCCCAAGAAATCCAGTGAAAACCTCAGCCTTGATGACTGTAACAAAAACCTCAT
CGAAGGATTTAACAGTCCTGGGCAAGAAACTACGCTGAACACCTTCTGTTGA

hide sequence

RefSeq Acc Id:

XM_039099842 ⟹ XP_038955770

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	39,181,327 - 39,296,699 (-)	NCBI
mRatBN7.2	X	35,372,453 - 35,488,073 (-)	NCBI

RefSeq Acc Id:

XM_039099843 ⟹ XP_038955771

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	39,181,327 - 39,296,814 (-)	NCBI
mRatBN7.2	X	35,372,453 - 35,488,072 (-)	NCBI

RefSeq Acc Id:

XM_039099844 ⟹ XP_038955772

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	X	39,181,327 - 39,296,754 (-)	NCBI
mRatBN7.2	X	35,372,453 - 35,488,073 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001276707	(Get FASTA)	NCBI Sequence Viewer
	XP_038955770	(Get FASTA)	NCBI Sequence Viewer
	XP_038955771	(Get FASTA)	NCBI Sequence Viewer
	XP_038955772	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	BAO37336	(Get FASTA)	NCBI Sequence Viewer
	EDL96133	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000042347.6
	ENSRNOP00000077197.1
	ENSRNOP00000086855.1

RefSeq Acc Id:

NP_001276707 ⟸ NM_001289778

- UniProtKB:

W0T3G7 (UniProtKB/TrEMBL), D4A4L4 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MERSGGNGAGARAGAPSEGAAKGSSLLSAKSTEGATGRFSQSTPRPTGMDGFLKSDERQRLAKE
RREEREKCLAAREQQILEKQKRAKLQYEKQIEERWRKLEEQRQREDQKRAAVEEKRKQKLREEE
ERLEAMMRRSLERTQQLELKKKCSWAGSAASGPGGRDGESENTPPLPLTLAASIPPSDTGTATA
AAESTNACDKLSTSTMNLPKQTEPPMSKHLSSSIVAISYSPDRALRSPLKSSYKSSPTRTTEKK
KNTLLSGVGDAGKGAMTGGEPSQMEKVKKGRGATSVSSGGLGSPLRRCEPPENISKRSSSPVKS
KVTAKTYPQSPKTVKPTYIGSPVKYYFPPTPSEETLKKKAEKEKSNKEKEGATGRQTTVLPREE
TLEKPMADKDATEKYVADKHATEKHSATGGKAEHSAGKSTAGTTDAGEAAKILAEKRRQARLQK
EQEEQERLEKEEQERLEKEELKRKAEEERLRIEKQEEEKKQQEEEEKRKAEEKAKEKAEEELLS
KEEQEKEKQEKEKKEKAMIEKQIQAEKEAAEAKAQDAAKQMRLEREQIMLQIEQERLERKKRID
EIMKRTRKSDASLEVKKEDPKVEIQPLPDVENKIKPVVPNKIEINVLNTCQKVNVSERAAPETF
PQDIFSNGLKPVGGPVHPDVLDGKSNSLDDSTEEVQSMDVSPVSKEELISIPEFSPVSEMIPGM
SLDQNGTGNARALQDILDFTGPPAFPKKSSENLSLDDCNKNLIEGFNSPGQETTLNTFC

hide sequence

Ensembl Acc Id:

ENSRNOP00000042347 ⟸ ENSRNOT00000045285

RefSeq Acc Id:	XP_038955772 ⟸ XM_039099844
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038955770 ⟸ XM_039099842
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I6A4J6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038955771 ⟸ XM_039099843
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I5ZJE8 (UniProtKB/TrEMBL), A6IPN0 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000086855 ⟸ ENSRNOT00000110899

Ensembl Acc Id:

ENSRNOP00000077197 ⟸ ENSRNOT00000108099

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D4A4L4-F1-model_v2	AlphaFold	D4A4L4	1-715	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1564852	AgrOrtholog
BioCyc Gene	G2FUF-2486	BioCyc
Ensembl Genes	ENSRNOG00000005176	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000045285.7	UniProtKB/TrEMBL
	ENSRNOT00000108099.1	UniProtKB/TrEMBL
	ENSRNOT00000110899.1	UniProtKB/TrEMBL
InterPro	E-MAP-115	UniProtKB/TrEMBL
	MAP7_domain-containing	UniProtKB/TrEMBL
KEGG Report	rno:317508	UniProtKB/TrEMBL
NCBI Gene	317508	ENTREZGENE
PANTHER	MAP7 DOMAIN-CONTAINING PROTEIN 2	UniProtKB/TrEMBL
	MICROTUBULE-ASSOCIATED PROTEIN	UniProtKB/TrEMBL
Pfam	MAP7	UniProtKB/TrEMBL
PhenoGen	Map7d2	PhenoGen
RatGTEx	ENSRNOG00000005176	RatGTEx
UniProt	A0A8I5ZJE8	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I6A4J6	ENTREZGENE, UniProtKB/TrEMBL
	A6IPN0	ENTREZGENE, UniProtKB/TrEMBL
	D4A4L4	ENTREZGENE, UniProtKB/TrEMBL
	W0T3G7	ENTREZGENE
UniProt Secondary	W0T3G7	UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-08-29	Map7d2	MAP7 domain containing 2	Mtap7d2	MAP7 domain containing 2	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-03-07	Mtap7d2	MAP7 domain containing 2	RGD1564852_predicted	similar to hypothetical protein FLJ14503 (predicted)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2006-03-07	RGD1564852_predicted	similar to hypothetical protein FLJ14503 (predicted)	LOC317508	similar to hypothetical protein FLJ14503	Symbol and Name status set to approved	1299863	APPROVED
2006-02-09	LOC317508	similar to hypothetical protein FLJ14503			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar