Map7d2 (MAP7 domain containing 2) - Rat Genome Database

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Gene: Map7d2 (MAP7 domain containing 2) Mus musculus
Analyze
Symbol: Map7d2
Name: MAP7 domain containing 2
RGD ID: 1558088
MGI Page MGI
Description: Predicted to be involved in microtubule cytoskeleton organization. Predicted to be active in microtubule cytoskeleton. Is expressed in nervous system. Orthologous to human MAP7D2 (MAP7 domain containing 2).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 1600028E09Rik; 2900002G04Rik; 5330432J06Rik; C030036K04Rik; MAP7 domain-containing protein 2; Mtap7; Mtap7d2; novel E-MAP-115 family protein; RP23-39I7.2
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X158,197,488 - 158,281,954 (+)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX158,197,568 - 158,281,753 (+)EnsemblGRCm39 Ensembl
GRCm38X159,414,492 - 159,498,958 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX159,414,572 - 159,498,757 (+)EnsemblGRCm38mm10GRCm38
MGSCv37X155,852,510 - 155,936,879 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36X154,758,683 - 154,843,052 (+)NCBIMGSCv36mm8
CeleraX142,661,499 - 142,746,251 (+)NCBICelera
Cytogenetic MapXF4NCBI
cM MapX73.45NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
3. Mouse MP Annotation Import Pipeline RGD automated import pipeline
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:14610273   PMID:16141072   PMID:16141073   PMID:20548051   PMID:21267068   PMID:21873635   PMID:32325033  
PMID:32581705   PMID:36417873  


Genomics

Comparative Map Data
Map7d2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X158,197,488 - 158,281,954 (+)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX158,197,568 - 158,281,753 (+)EnsemblGRCm39 Ensembl
GRCm38X159,414,492 - 159,498,958 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX159,414,572 - 159,498,757 (+)EnsemblGRCm38mm10GRCm38
MGSCv37X155,852,510 - 155,936,879 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36X154,758,683 - 154,843,052 (+)NCBIMGSCv36mm8
CeleraX142,661,499 - 142,746,251 (+)NCBICelera
Cytogenetic MapXF4NCBI
cM MapX73.45NCBI
MAP7D2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38X20,006,713 - 20,116,907 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 EnsemblX20,006,713 - 20,116,907 (-)EnsemblGRCh38hg38GRCh38
GRCh37X20,024,831 - 20,135,025 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36X19,935,150 - 20,044,937 (-)NCBINCBI36Build 36hg18NCBI36
CeleraX24,148,899 - 24,259,048 (-)NCBICelera
Cytogenetic MapXp22.12NCBI
HuRefX17,770,131 - 17,877,650 (-)NCBIHuRef
CHM1_1X20,055,334 - 20,165,529 (-)NCBICHM1_1
T2T-CHM13v2.0X19,589,600 - 19,699,784 (-)NCBIT2T-CHM13v2.0
Map7d2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8X39,181,091 - 39,296,814 (-)NCBIGRCr8
mRatBN7.2X35,372,453 - 35,488,073 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 EnsemblX35,372,700 - 35,488,091 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_UtxX36,514,297 - 36,625,464 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0X39,977,937 - 40,089,108 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0X35,143,980 - 35,255,149 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0X38,400,578 - 38,467,825 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 EnsemblX38,397,261 - 38,468,360 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0X38,706,546 - 38,777,123 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X56,573,552 - 56,689,427 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
CeleraX36,028,803 - 36,139,227 (-)NCBICelera
Cytogenetic MapXq14NCBI
Map7d2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955509450,486 - 494,290 (-)EnsemblChiLan1.0
ChiLan1.0NW_004955509447,053 - 568,590 (-)NCBIChiLan1.0ChiLan1.0
MAP7D2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2X21,802,994 - 21,914,412 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1X21,806,381 - 21,917,800 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0X12,624,994 - 12,736,318 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1X19,985,121 - 20,096,303 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 EnsemblX19,989,048 - 20,096,192 (-)Ensemblpanpan1.1panPan2
MAP7D2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1X15,916,609 - 15,972,552 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 EnsemblX15,917,978 - 15,971,000 (-)EnsemblCanFam3.1canFam3CanFam3.1
ROS_Cfam_1.0X15,875,385 - 15,983,930 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 EnsemblX15,875,626 - 15,983,901 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1X15,925,054 - 16,033,552 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0X15,932,874 - 16,041,328 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0X15,994,670 - 16,103,414 (-)NCBIUU_Cfam_GSD_1.0
Map7d2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2X9,007,408 - 9,119,000 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366244,087,099 - 4,147,167 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366244,038,854 - 4,150,495 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MAP7D2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 EnsemblX16,327,968 - 16,422,772 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1X16,327,718 - 16,423,546 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2X17,593,326 - 17,690,207 (-)NCBISscrofa10.2Sscrofa10.2susScr3
MAP7D2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1X18,474,073 - 18,583,545 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 EnsemblX18,473,803 - 18,583,523 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605620,329,801 - 20,440,783 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Map7d2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248294,825,277 - 4,884,460 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248294,821,828 - 4,948,202 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Map7d2
2072 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1007
Count of miRNA genes:457
Interacting mature miRNAs:523
Transcripts:ENSMUST00000043151, ENSMUST00000112470, ENSMUST00000112471, ENSMUST00000145142, ENSMUST00000156172
Prediction methods:Miranda, Pita, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357823Spha3_msperm head anomaly 3 (mouse)Not determinedX102055848162758941Mouse
1301209Cia19_mcollagen induced arthritis 19 (mouse)Not determinedX120993165160213038Mouse
10412164Cmv2_mcytomegalovirus resistance 2 (mouse)Not determinedX125685149159685269Mouse
1558900Bw3_mbody weight QTL 3 (mouse)Not determinedX133540040165298595Mouse
10401118Pgia39_mproteoglycan induced arthritis 39 (mouse)Not determinedX144474380169476592Mouse
1302000Pgia25_mproteoglycan induced arthritis 2 (mouse)Not determinedX144474380169476592Mouse
12738421Lfibq17_mliver fibrosis QTL 17 (mouse)X148148453164945064Mouse


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001081124 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001313751 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001313752 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001313753 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001359310 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001359311 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001359313 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001359314 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001359315 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001359317 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001359320 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001359321 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001359322 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011247881 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017318641 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030251519 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030251520 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036162119 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AK005554 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK013466 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK019929 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK021126 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK030316 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK031868 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK043342 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK045412 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK162227 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL672284 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BE952779 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CK620800 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000043151   ⟹   ENSMUSP00000046693
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 EnsemblX158,242,121 - 158,281,579 (+)Ensembl
GRCm38.p6 EnsemblX159,459,125 - 159,498,583 (+)Ensembl
RefSeq Acc Id: ENSMUST00000112470   ⟹   ENSMUSP00000108089
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 EnsemblX158,242,121 - 158,269,619 (+)Ensembl
GRCm38.p6 EnsemblX159,459,125 - 159,486,623 (+)Ensembl
RefSeq Acc Id: ENSMUST00000112471   ⟹   ENSMUSP00000108090
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 EnsemblX158,197,568 - 158,281,753 (+)Ensembl
GRCm38.p6 EnsemblX159,414,572 - 159,498,757 (+)Ensembl
RefSeq Acc Id: ENSMUST00000145142   ⟹   ENSMUSP00000122106
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 EnsemblX158,229,004 - 158,273,774 (+)Ensembl
GRCm38.p6 EnsemblX159,446,008 - 159,490,778 (+)Ensembl
RefSeq Acc Id: ENSMUST00000156172   ⟹   ENSMUSP00000119132
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 EnsemblX158,242,133 - 158,253,089 (+)Ensembl
GRCm38.p6 EnsemblX159,459,137 - 159,470,093 (+)Ensembl
RefSeq Acc Id: NM_001081124   ⟹   NP_001074593
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X158,197,568 - 158,281,753 (+)NCBI
GRCm38X159,414,572 - 159,498,757 (+)NCBI
MGSCv37X155,852,510 - 155,936,879 (+)RGD
CeleraX142,661,499 - 142,746,251 (+)RGD
cM MapX ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001313751   ⟹   NP_001300680
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X158,197,568 - 158,281,753 (+)NCBI
GRCm38X159,414,572 - 159,498,757 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001313752   ⟹   NP_001300681
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X158,242,121 - 158,269,619 (+)NCBI
GRCm38X159,459,125 - 159,486,623 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001313753   ⟹   NP_001300682
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X158,242,121 - 158,281,753 (+)NCBI
GRCm38X159,459,125 - 159,498,757 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001359310   ⟹   NP_001346239
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X158,197,568 - 158,281,753 (+)NCBI
GRCm38X159,414,572 - 159,498,757 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001359311   ⟹   NP_001346240
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X158,197,568 - 158,281,753 (+)NCBI
GRCm38X159,414,572 - 159,498,757 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001359313   ⟹   NP_001346242
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X158,197,568 - 158,281,753 (+)NCBI
GRCm38X159,414,572 - 159,498,757 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001359314   ⟹   NP_001346243
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X158,197,568 - 158,281,753 (+)NCBI
GRCm38X159,414,572 - 159,498,757 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001359315   ⟹   NP_001346244
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X158,197,568 - 158,281,753 (+)NCBI
GRCm38X159,414,572 - 159,498,757 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001359317   ⟹   NP_001346246
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X158,197,568 - 158,281,753 (+)NCBI
GRCm38X159,414,572 - 159,498,757 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001359320   ⟹   NP_001346249
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X158,242,121 - 158,281,753 (+)NCBI
GRCm38X159,459,125 - 159,498,757 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001359321   ⟹   NP_001346250
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X158,242,121 - 158,281,753 (+)NCBI
GRCm38X159,459,125 - 159,498,757 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001359322   ⟹   NP_001346251
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X158,242,121 - 158,281,753 (+)NCBI
GRCm38X159,459,125 - 159,498,757 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011247881   ⟹   XP_011246183
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X158,197,553 - 158,281,954 (+)NCBI
GRCm38X159,414,649 - 159,498,958 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017318641   ⟹   XP_017174130
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X158,197,488 - 158,281,954 (+)NCBI
GRCm38X159,414,492 - 159,498,958 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030251519   ⟹   XP_030107379
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X158,242,127 - 158,281,954 (+)NCBI
GRCm38X159,459,139 - 159,498,958 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030251520   ⟹   XP_030107380
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X158,242,123 - 158,281,954 (+)NCBI
GRCm38X159,459,127 - 159,498,958 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036162119   ⟹   XP_036018012
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X158,242,105 - 158,281,954 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001074593 (Get FASTA)   NCBI Sequence Viewer  
  NP_001300680 (Get FASTA)   NCBI Sequence Viewer  
  NP_001300681 (Get FASTA)   NCBI Sequence Viewer  
  NP_001300682 (Get FASTA)   NCBI Sequence Viewer  
  NP_001346239 (Get FASTA)   NCBI Sequence Viewer  
  NP_001346240 (Get FASTA)   NCBI Sequence Viewer  
  NP_001346242 (Get FASTA)   NCBI Sequence Viewer  
  NP_001346243 (Get FASTA)   NCBI Sequence Viewer  
  NP_001346244 (Get FASTA)   NCBI Sequence Viewer  
  NP_001346246 (Get FASTA)   NCBI Sequence Viewer  
  NP_001346249 (Get FASTA)   NCBI Sequence Viewer  
  NP_001346250 (Get FASTA)   NCBI Sequence Viewer  
  NP_001346251 (Get FASTA)   NCBI Sequence Viewer  
  XP_011246183 (Get FASTA)   NCBI Sequence Viewer  
  XP_017174130 (Get FASTA)   NCBI Sequence Viewer  
  XP_030107379 (Get FASTA)   NCBI Sequence Viewer  
  XP_030107380 (Get FASTA)   NCBI Sequence Viewer  
  XP_036018012 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein A2AG50 (Get FASTA)   NCBI Sequence Viewer  
  BAB31923 (Get FASTA)   NCBI Sequence Viewer  
  BAC26896 (Get FASTA)   NCBI Sequence Viewer  
  BAC27583 (Get FASTA)   NCBI Sequence Viewer  
  BAC32351 (Get FASTA)   NCBI Sequence Viewer  
  BAE36802 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000046693
  ENSMUSP00000046693.6
  ENSMUSP00000108089
  ENSMUSP00000108089.2
  ENSMUSP00000108090
  ENSMUSP00000108090.3
  ENSMUSP00000119132.2
  ENSMUSP00000122106.2
Reference Protein Sequences
RefSeq Acc Id: NP_001074593   ⟸   NM_001081124
- Peptide Label: isoform 1
- UniProtKB: Q8BMQ4 (UniProtKB/Swiss-Prot),   Q8BLE6 (UniProtKB/Swiss-Prot),   A2AG54 (UniProtKB/Swiss-Prot),   Q9D2A4 (UniProtKB/Swiss-Prot),   A2AG50 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_011246183   ⟸   XM_011247881
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_017174130   ⟸   XM_017318641
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: NP_001300680   ⟸   NM_001313751
- Peptide Label: isoform 2
- UniProtKB: A2AG50 (UniProtKB/Swiss-Prot),   Q3TS73 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001300682   ⟸   NM_001313753
- Peptide Label: isoform 3
- UniProtKB: A2AG50 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001300681   ⟸   NM_001313752
- Peptide Label: isoform 4
- UniProtKB: A2AG50 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001346239   ⟸   NM_001359310
- Peptide Label: isoform 5
RefSeq Acc Id: NP_001346240   ⟸   NM_001359311
- Peptide Label: isoform 6
RefSeq Acc Id: NP_001346243   ⟸   NM_001359314
- Peptide Label: isoform 8
RefSeq Acc Id: NP_001346242   ⟸   NM_001359313
- Peptide Label: isoform 7
RefSeq Acc Id: NP_001346244   ⟸   NM_001359315
- Peptide Label: isoform 9
RefSeq Acc Id: NP_001346246   ⟸   NM_001359317
- Peptide Label: isoform 10
RefSeq Acc Id: NP_001346249   ⟸   NM_001359320
- Peptide Label: isoform 11
RefSeq Acc Id: NP_001346250   ⟸   NM_001359321
- Peptide Label: isoform 12
RefSeq Acc Id: NP_001346251   ⟸   NM_001359322
- Peptide Label: isoform 13
RefSeq Acc Id: XP_030107380   ⟸   XM_030251520
- Peptide Label: isoform X5
RefSeq Acc Id: XP_030107379   ⟸   XM_030251519
- Peptide Label: isoform X3
RefSeq Acc Id: ENSMUSP00000122106   ⟸   ENSMUST00000145142
RefSeq Acc Id: ENSMUSP00000108090   ⟸   ENSMUST00000112471
RefSeq Acc Id: ENSMUSP00000108089   ⟸   ENSMUST00000112470
RefSeq Acc Id: ENSMUSP00000119132   ⟸   ENSMUST00000156172
RefSeq Acc Id: ENSMUSP00000046693   ⟸   ENSMUST00000043151
RefSeq Acc Id: XP_036018012   ⟸   XM_036162119
- Peptide Label: isoform X4

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-A2AG50-F1-model_v2 AlphaFold A2AG50 1-781 view protein structure

Promoters
RGD ID:6846002
Promoter ID:MM_KWN:62568
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain
Transcripts:ENSMUST00000058145,   OTTMUST00000046412
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36X155,852,381 - 155,852,881 (+)MPROMDB
RGD ID:6846003
Promoter ID:MM_KWN:62571
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day2,   3T3L1_Day3,   Spleen
Transcripts:ENSMUST00000087141,   ENSMUST00000112470,   OTTMUST00000046415,   UC009USQ.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36X155,896,994 - 155,897,494 (+)MPROMDB
RGD ID:13681724
Promoter ID:EPDNEW_M25011
Type:initiation region
Name:Map7d2_1
Description:Mus musculus MAP7 domain containing 2 , transcript variant 3,mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M25012  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38X159,414,669 - 159,414,729EPDNEW
RGD ID:13681726
Promoter ID:EPDNEW_M25012
Type:initiation region
Name:Map7d2_2
Description:Mus musculus MAP7 domain containing 2 , transcript variant 3,mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M25011  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38X159,459,205 - 159,459,265EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1917474 AgrOrtholog
Ensembl Genes ENSMUSG00000041020 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000043151 ENTREZGENE
  ENSMUST00000043151.12 UniProtKB/Swiss-Prot
  ENSMUST00000112470 ENTREZGENE
  ENSMUST00000112470.3 UniProtKB/Swiss-Prot
  ENSMUST00000112471 ENTREZGENE
  ENSMUST00000112471.9 UniProtKB/Swiss-Prot
  ENSMUST00000145142.8 UniProtKB/TrEMBL
  ENSMUST00000156172.3 UniProtKB/TrEMBL
InterPro MAP7_fam UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:78283 UniProtKB/Swiss-Prot
MGD MGI:1917474 ENTREZGENE
NCBI Gene 78283 ENTREZGENE
PANTHER MAP7 DOMAIN-CONTAINING PROTEIN 2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  MICROTUBULE-ASSOCIATED PROTEIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam MAP7 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Map7d2 PhenoGen
UniProt A2AG50 ENTREZGENE
  A2AG51_MOUSE UniProtKB/TrEMBL
  A2AG54 ENTREZGENE
  MA7D2_MOUSE UniProtKB/Swiss-Prot
  Q3TS73 ENTREZGENE, UniProtKB/TrEMBL
  Q8BLE6 ENTREZGENE
  Q8BMQ4 ENTREZGENE
  Q8C0A6_MOUSE UniProtKB/TrEMBL
  Q9D2A4 ENTREZGENE
UniProt Secondary A2AG54 UniProtKB/Swiss-Prot
  Q8BLE6 UniProtKB/Swiss-Prot
  Q8BMQ4 UniProtKB/Swiss-Prot
  Q9D2A4 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2012-12-25 Map7d2  MAP7 domain containing 2  Mtap7d2    Symbol and/or name change 5135510 APPROVED