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Gene: Trank1 (tetratricopeptide repeat and ankyrin repeat containing 1) Rattus norvegicus

Analyze

Symbol:

Trank1

Name:

tetratricopeptide repeat and ankyrin repeat containing 1

RGD ID:

1563130

Description:

Orthologous to human TRANK1 (tetratricopeptide repeat and ankyrin repeat containing 1); INTERACTS WITH 6-propyl-2-thiouracil; bisphenol A; dimethylarsinic acid.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

LOC316022; RGD1563130; similar to KIAA0342 protein; TPR and ankyrin repeat-containing protein 1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	8	120,153,381 - 120,233,879 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	8	120,154,362 - 120,234,087 (+)	Ensembl				GRCr8
mRatBN7.2	8	111,275,973 - 111,355,491 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	8	111,276,354 - 111,355,092 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	8	116,892,440 - 116,970,177 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	8	115,091,671 - 115,169,416 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	8	112,934,500 - 113,012,248 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	8	119,566,509 - 119,644,249 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	8	119,566,509 - 119,644,249 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	8	118,916,156 - 118,993,803 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	8	115,701,554 - 115,781,013 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	8	110,557,993 - 110,635,930 (+)	NCBI		Celera
Cytogenetic Map	8	q32	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autism spectrum disorder (ISO)

autistic disorder (ISO)

bipolar disorder (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(-)-epigallocatechin 3-gallate (ISO)

1,2,4-trichloro-5-(2,5-dichlorophenyl)benzene (ISO)

1,2-dichloroethane (ISO)

1,2-dimethylhydrazine (ISO)

17beta-estradiol (ISO)

2,2',4,4',5,5'-hexachlorobiphenyl (ISO)

2,2',5,5'-tetrachlorobiphenyl (ISO)

2,4,4'-trichlorobiphenyl (ISO)

4,4'-sulfonyldiphenol (ISO)

4-hydroxyphenyl retinamide (ISO)

6-propyl-2-thiouracil (EXP)

acrolein (ISO)

actinomycin D (ISO)

aflatoxin B1 (ISO)

Aflatoxin B2 alpha (ISO)

all-trans-retinoic acid (ISO)

alpha-pinene (ISO)

arsane (ISO)

arsenic atom (ISO)

arsenite(3-) (ISO)

benzo[a]pyrene (ISO)

benzo[e]pyrene (ISO)

bis(2-ethylhexyl) phthalate (ISO)

bisphenol A (EXP,ISO)

cadmium atom (ISO)

cadmium dichloride (ISO)

calcitriol (ISO)

camptothecin (ISO)

chlorpyrifos (ISO)

cisplatin (ISO)

dextran sulfate (ISO)

dibutyl phthalate (ISO)

dimethylarsinic acid (EXP,ISO)

diquat (ISO)

doxorubicin (ISO)

endosulfan (EXP)

ethanol (ISO)

folic acid (ISO)

gentamycin (EXP)

hydrogen peroxide (ISO)

methapyrilene (ISO)

methylarsonic acid (ISO)

nickel atom (ISO)

Nutlin-3 (ISO)

ozone (ISO)

paracetamol (EXP)

PCB138 (ISO)

potassium chromate (ISO)

SB 431542 (ISO)

silicon dioxide (ISO)

sodium arsenate (ISO)

sodium arsenite (ISO)

sotorasib (ISO)

temozolomide (ISO)

testosterone (ISO)

titanium dioxide (ISO)

trametinib (ISO)

tributylstannane (EXP)

trichloroethene (EXP)

trichostatin A (ISO)

triptonide (ISO)

valproic acid (EXP,ISO)

vinclozolin (EXP)

References

References - curated

#	Reference Title	Reference Citation
1.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
2.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Genomics

Comparative Map Data

Trank1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	8	120,153,381 - 120,233,879 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	8	120,154,362 - 120,234,087 (+)	Ensembl				GRCr8
mRatBN7.2	8	111,275,973 - 111,355,491 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	8	111,276,354 - 111,355,092 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	8	116,892,440 - 116,970,177 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	8	115,091,671 - 115,169,416 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	8	112,934,500 - 113,012,248 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	8	119,566,509 - 119,644,249 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	8	119,566,509 - 119,644,249 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	8	118,916,156 - 118,993,803 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	8	115,701,554 - 115,781,013 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	8	110,557,993 - 110,635,930 (+)	NCBI		Celera
Cytogenetic Map	8	q32	NCBI

TRANK1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	3	36,826,819 - 36,945,744 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	3	36,826,817 - 36,945,057 (-)	Ensembl			hg38	GRCh38
GRCh37	3	36,868,310 - 36,986,545 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	3	36,843,315 - 36,877,415 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Celera	3	36,811,078 - 36,929,308 (-)	NCBI		Celera
Cytogenetic Map	3	p22.2	NCBI
HuRef	3	36,808,964 - 36,927,088 (-)	NCBI		HuRef
CHM1_1	3	36,818,551 - 36,938,172 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	3	36,828,168 - 36,947,110 (-)	NCBI		T2T-CHM13v2.0

Trank1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	9	111,140,351 - 111,224,843 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	9	111,140,807 - 111,224,843 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	9	111,311,283 - 111,395,775 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	9	111,311,739 - 111,395,775 (+)	Ensembl			mm10	GRCm38
MGSCv37	9	111,214,243 - 111,298,279 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	9	111,219,636 - 111,240,591 (+)	NCBI		MGSCv36	mm8
Celera	9	111,038,156 - 111,123,540 (+)	NCBI		Celera
Cytogenetic Map	9	F3	NCBI
cM Map	9	60.95	NCBI

Trank1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955421	3,707,510 - 3,853,868 (-)	Ensembl
ChiLan1.0	NW_004955421	3,707,510 - 3,852,886 (-)	NCBI	ChiLan1.0	ChiLan1.0

TRANK1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	2	36,788,485 - 36,907,530 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	3	36,793,249 - 36,912,330 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	3	36,732,939 - 36,852,023 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	3	37,023,455 - 37,141,982 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	3	37,024,909 - 37,102,299 (-)	Ensembl			panPan2	panpan1.1

TRANK1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	23	6,749,817 - 6,849,113 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	23	6,631,276 - 6,849,034 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	23	6,789,473 - 6,869,908 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	23	7,034,999 - 7,115,474 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	23	6,946,464 - 7,134,352 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	23	6,854,618 - 6,935,467 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	23	6,997,235 - 7,077,671 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	23	6,987,132 - 7,067,610 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Trank1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	193,265,171 - 193,365,150 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936473	26,403,681 - 26,482,721 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936473	26,403,786 - 26,481,284 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

TRANK1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	13	21,938,966 - 22,023,156 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	13	21,913,400 - 22,023,165 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	13	23,906,064 - 23,912,672 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

TRANK1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	15	2,464,289 - 2,583,314 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	15	2,502,023 - 2,581,141 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666063	11,201,749 - 11,319,415 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Trank1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624788	14,922,497 - 15,065,624 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624788	14,926,685 - 15,035,745 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Trank1
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	8	102,287,730 - 102,364,191 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Trank1
361 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	109
Count of miRNA genes:	92
Interacting mature miRNAs:	100
Transcripts:	ENSRNOT00000028633
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
2303171	Bp331	Blood pressure QTL 331	5.57	0.005	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	8	105462581	132782436	Rat
1549909	Stresp11	Stress response QTL 11	6.83	0.0019	stress-related behavior trait (VT:0010451)	number of approaches toward negative stimulus before onset of defensive burying response (CMO:0001960)	8	82352698	127352698	Rat
631210	Bw3	Body weight QTL3	5.9		mesenteric fat pad mass (VT:0010427)	mesenteric fat pad weight to body weight ratio (CMO:0000654)	8	61019838	121662124	Rat
9590292	Uminl3	Urine mineral level QTL 3	3.62	0.001	urine mineral amount (VT:0015086)	urine electrolyte level (CMO:0000593)	8	80768445	125768445	Rat
8694446	Bw170	Body weight QTL 170	12.07	0.001	retroperitoneal fat pad mass (VT:0010430)	retroperitoneal fat pad weight to body weight ratio (CMO:0000635)	8	80768445	125768445	Rat
631650	Stl6	Serum triglyceride level QTL 6	4	0.0019	blood triglyceride amount (VT:0002644)	plasma triglyceride level (CMO:0000548)	8	70041301	121080908	Rat
10450865	Bw175	Body weight QTL 175	4.1		total fat pad mass (VT:0015008)	adipose tissue molecular composition measurement (CMO:0000484)	8	84192326	129192326	Rat
738011	Anxrr9	Anxiety related response QTL 9	6.1		exploratory behavior trait (VT:0010471)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	8	102413464	132782436	Rat
724539	Cm19	Cardiac mass QTL 19	2.6		heart mass (VT:0007028)	calculated heart weight (CMO:0000073)	8	103375781	129871912	Rat
70197	BpQTLcluster8	Blood pressure QTL cluster 8	3.482		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	8	55428333	127966348	Rat
634332	Pia18	Pristane induced arthritis QTL 18	4		joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	8	84192326	132782436	Rat
2300181	Bmd55	Bone mineral density QTL 55	5.7	0.0001	femur mineral mass (VT:0010011)	volumetric bone mineral density (CMO:0001553)	8	85348065	130348065	Rat
1300171	Bp184	Blood pressure QTL 184	3.66		arterial blood pressure trait (VT:2000000)	blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)	8	79394435	132782436	Rat
2313400	Anxrr25	Anxiety related response QTL 25			aggression-related behavior trait (VT:0015014)	tameness/aggressiveness composite score (CMO:0002136)	8	98145073	122898010	Rat
8694200	Abfw4	Abdominal fat weight QTL 4	9.07	0.001	visceral adipose mass (VT:0010063)	abdominal fat pad weight to body weight ratio (CMO:0000095)	8	80768445	125768445	Rat
8694392	Bw161	Body weight QTL 161	8.06	0.001	body lean mass (VT:0010483)	lean tissue morphological measurement (CMO:0002184)	8	80768445	125768445	Rat
61437	Cia6	Collagen induced arthritis QTL 6			joint integrity trait (VT:0010548)	joint inflammation composite score (CMO:0000919)	8	91340911	131690273	Rat

Markers in Region

RH144141

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	8	111,284,724 - 111,284,860 (+)	MAPPER	mRatBN7.2
Rnor_6.0	8	119,574,883 - 119,575,018	NCBI	Rnor6.0
Rnor_5.0	8	118,924,529 - 118,924,664	UniSTS	Rnor5.0
RGSC_v3.4	8	115,711,646 - 115,711,781	UniSTS	RGSC3.4
Celera	8	110,566,584 - 110,566,719	UniSTS
RH 3.4 Map	8	1191.6	UniSTS
Cytogenetic Map	8	q32	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	66	154	80	79	48	30	48	6	280	129	10	133	79	92	31	16	16

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001191799	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039081614	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039081615	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039081616	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039081617	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039081618	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005487854	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005487855	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC122675	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473954	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000008	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000028633 ⟹ ENSRNOP00000028633

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	8	120,154,438 - 120,233,879 (+)	Ensembl
mRatBN7.2 Ensembl	8	111,276,354 - 111,355,092 (+)	Ensembl
Rnor_6.0 Ensembl	8	119,566,509 - 119,644,249 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000122532 ⟹ ENSRNOP00000104428

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	8	120,154,362 - 120,234,087 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000165486 ⟹ ENSRNOP00000110556

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	8	120,154,380 - 120,233,879 (+)	Ensembl

RefSeq Acc Id:

NM_001191799 ⟹ NP_001178728

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	120,154,438 - 120,233,879 (+)	NCBI
mRatBN7.2	8	111,276,051 - 111,355,491 (+)	NCBI
Rnor_6.0	8	119,566,509 - 119,644,249 (+)	NCBI
Rnor_5.0	8	118,916,156 - 118,993,803 (+)	NCBI
Celera	8	110,557,993 - 110,635,930 (+)	NCBI

Sequence:

show sequence

ATGGCTTCCAGGACCGCGGGCCGCCGCTGGCCTCCGAGGAGACGCAGCTCGAGACGGGGCCCCA
CGCCGCGGTCCCGCGCGCCCGGCGCGAAGCTTTCGGCCCCGGAGGCCGGGCCGCCACGCCGCGG
GCCTCTCCCGCGGGGCGGCGCGGGACGGGACACTCTCCTCGGAGCAAAGGCGACACCTTCCTCT
CCCGCCACCAGGCGATACGTGACGGCCCTCGGGCCCCCGCAGCCGCGTGGGAACACGGACTCGG
CCTGCGCTGCGCTCCCGCAGCCGGTCCCGCACGAGCCGCGGGAAGCAGCCTTCCGCCTCGTCCC
GGGCTCGGAACGCCGGGCCTCAGTGTCACCTGCGCGCATCCCGAGGCGGCGGCGGCGGGTCCCG
GCCATGTGGGACCCGCGCGCGGCAAGGACTCCTCCTCGGGAACTGGCTGTGCTGCTGTGCAACA
AATCCAATGCATTTTACAGCCTCGGGAAATGGGACGAGGCTTTTCTTGCTGCCAAGGAGTGTCT
GCAATGGGACCCAACCTATGTGAAGGGATACTACCGTGCTGGTTACTCCCTGCTGCACTTGCTC
CAGCCTTATGAAGCTGCTCGCATGTTTTTTGAGGGTCTACGACTTTTGCAGAGAAGCCCGGACC
AAGTGCAGGTTCCTGATTTTCTTGTTGGGATCTTCACAACCATGAGCAGTGACTCCATTGTTTT
GCAGAGTTTCTTGCCCTGTTTTGATCATATTTTCAGTACTGGATTTTCAACAGAAGTGTGGCAA
TCTGTAATACAGAAGTTGGCAAAGAAAGGACTGTGGCATTCATTTCTACTGTTGTCAGCAAAGA
AAGACAGACTGCCAAGCAACATCCATGTCTCTGAGCTGTCGCTGCAAAGTCTTTTTGAGAAGTA
TGTCTTCATTGGGCTTTATGAGAAAATGGAACAAGTGCCCAAGTTGGTTCAGTGGCTCATCTCC
ATCGGTGCAAACATCGAAACCATAGGACCCAGCCCTCTCCATGCCCTCATGCGGCTCTGCATCC
AATCGAGGGAAAGTCAGCTTTTCCGGTGGGTCATGGAGTACAAGCCTGAGTGGAAAGAGCACAT
CAACTACAGAGATGATGCTGGCTGCACCGTCTTGCATGTTGCTGCTGCCCATTTCCCAGGATAC
ACCATCAAGCGACAAACTGAAGATGTGCAGATGCTCCTGAGCTTTGGAGCAGACCCTACCCTGT
TGGATGGACATGCTCGGTCTGCTGTGGATGTTCTGAAGAGGAACAGGAACTTCAGAGCTGTTGA
CAAAATCAACAGTCACCTGGAAAAGCTAGCTTCGAGTTCTAAAGGCCGATCAGAAATCTCTGCT
GGCCTAGATGTTAACCGAGACTGTGCCACCACTTTCGTCAAATTCTTACTGGAACGACAGAAGT
GGCCCGAAGTGCTTCTGCTGCTCACTCGCAAAGCCAGCGGGCAGCATCAGCTCAGAAATGGCCT
CATCAAAGATTGTGACCTCTCAGACCTGGACATCTGTACTGTCATTCCCCATCTTAGCGCCTGG
GACCAGAGGAAGACTCAGCTTCTGAGCCGCCTGATTGACAGTGGTGCATTGCCTGAGGGTCTCC
AAGACAGCCAGGACAGGCCGCTTCTCATGTGCCTGAGACACGAGGACTTCGACTTGGCTTTTCT
TCTCTTGACCAAGGGTGCAGACCCCCGTAGTGTTTCTCTCATGGAAGGGGACACTCCTTTGCAT
GCAGCGCTCCACATCTTTCTGGACATCAATGCTGACATTGGCTTTAACTTCCTCAGCCACCTGT
TGGATTTATTTTTGTCCAACCCTACCGAATTTTACTACCTTAATCCTAACGTTCAAGACAGCAA
TGGGAACACATTGATGCACCTCCTCTTCCAGAAGGGCATGCTGAAGCGCACAAAGAAGCTGATA
GAGCTGCTGGTGAAGTTCGACATCAACTTCAACCTGAAGAACAAAGCAGGCAAAGGTGTTAGGC
ACCGGATTAAGAAGAACGATGCTCTGCTTTTGGCTTGGAACAAAGCGCTGACAGAGAGCAGGCG
GAAGAACCGGCAAGACCCTGCTGCCCACCTGGGGAGGCTGTCCAGATCTTCTGCCCTTGGCCAT
ACATCTCAGCTCAAGTCACAGACTTCCTTCAAGTCTTTGCCATGTAGTACTGCTGACAGAACCC
TTTCTAAGGGAGTCACAGAGATTCTCCCTGATGTTCAGGTGACCAGGCAGGAACCTGAAGCCAT
GAGGACACGTTCTTTGAGAGACCGCCTTGTACAGGACATCACAGTTCTGATCCAGCAGATTGAG
TTGGATATGTCTCTCCCACAGGACTATCCTCAGCAAGGCTCTCCCAAGATGGCAGCTGGCATGG
AAGGAAAGAAAGACAAGCTCCAGAGAACTCAGAGTATGGGGAGCTCTGGCTCTAGTAGAGACAA
CCCTGTTGCCTCTGAGGCTGGGGATGGGCATGCCCAGGCAGGCCCGGGGGCTTTACAGCTTGCT
CCAGTTGGTAACAGATTGCGAGTAGCCGGTGGTAACCAGGACAACTGGACCATGCAGGAGATTC
AAGCCTGTCTTCAAGACTTTGATAACATGACCTGGGAGATTGAGTGCACCTCAGAAATGCTGAA
GAAGCTGTCCAGTAAGGTTATGACCAAAGTTATAAAGAAAAAAATAATCCTTGCTATCCAGCAG
TTGGGAAATGGTGAGTGGACCCAGGGCCTGCAGAAGCGGCTGAAGCACTCAAAAGGAAACATCC
AGCTCTTTGAAGCAAAGCTAGACAAAGGTGCCAGGATGCTGTGGGAGCTTGCTATTGACTTCTC
TGCTCGGTGCAGTGAGAACTCTGAGAAAATTATGGGTACAGAGCGGAATACCTACTCCATGGAG
AAATCAGGGCGGGTCTATACGGAAATTATCCGCATCTGGGACATTGTCTTGGATCACTGCAAGC
TTTCAGATTCCATCATGGCCATCTGCAGTGCCTACACCCGGGGCTTGTCCTGTGTCCTTCGAAA
GAAACTGAAGGGTATCAACAAAGGACAGGTATCCGCTAACATGAAAATCCAGAAGCGGATACCC
CGCTGCTATGTGGAAGACACAGAGGCGGAGAAGAGCATAGAGCAGGCAGATCCTGAGTACTTTC
CTCCAGCCAGTGCTGTGGAGACAGAGTACAACATCATGAAGTTCCACAGCTTCAGTACCAGCAT
GGCCTTAAATATTCTCAACGACATGACAGCCACGGTGGAGTATCCGTTCCGAGTGGGTGAGCTT
GAGTACGCTGTGATTGACCTCAACCCTAAGCCCCTAGAGCCCATCATCCTCATTGGACGGAGTG
GCACTGGGAAAACAACTTGTTGCTTGTACAGGCTTTGGAAGAAATTCCATGTTTACTGGGAGAA
AGCTGAGCAGGCAGGAAGCCCATTGCTGTCCAAACAGATCTTGCCAAAGAGAAGGTTGGAAGTA
GAACCAGGAAAAGAGGGTCCAGGCCAGGAGGAAGAAGAAAATGAGGAAGAGGAGGGTTCTATCA
AAGTGGAAACAGTGGATAGTACAGAGGAGGAGCAAGAGAGTGAAGCGTGTGCAGGAGGCACAGT
GGAGTCAGCAGGGGACAGCCAAGCAGCGGAAGGATGTGTGCCAGACCACCCGCACCAGCTGGAG
CATCTACATCAGATCTTTGTGACTAAGAACCATGTCCTGTGCCAGGAGGTGCAGAGGAATTTTA
TTGAACTCTCCAAGTCCACCAAGGCCACCAGTCACTATAAACCATTGGATCCCAATGTCCACAA
ACTCCAGGACCTGCGGGATGAAAACTTCCCTCTGTTTGTGACTTCCAAACAGCTTCTCCTCCTG
CTCGATGCCTCTCTGCCAAAACCATTTTTTCTGAGAAACGAAGACGGAAGCTTAAAAAGAACCA
TTGTAGGATGGTCCACACAGGAAGAGTTTAGCATCCCCAGCTGGGAAGAGGATGAGGATGAGGT
TGAAGCTGATGGGAACTACAGTGAGGAGGAGAAAACTACCGAAACACAAACAGGGGATAGTGAT
CCCCGGGTATATGTGACGTTTGAGGTGTTCACCAATGAGATATGGCCCAAAATGATCAAAGGGA
GAAGTTCTTACAACCCAGCGCTGATTTGGAAAGAAATAAAATCCTTCTTGAAGGGTTCCTTTGA
GGCTCTTAGCTGTCCCCATGGGAGACTGACTGAAGAAGCCTATCAGAAGCTAGGGAGGAAACGA
TCCCCCAATTTCAAGGAAGATCGGAGTGAGATCTATAGCCTCTTCTGCCTGTATCAGCAGATCA
GGTCCCAGAAAGGGTATTTTGATGAAGAAGATGTCCTGTACAACCTGTCCTGGAGGCTGTCGAA
GCTCAGGGTGCTGCCCTGGTCCATCCATGAGCTGTATGGTGATGAGATTCAGGACTTCACCCAA
GCAGAGCTGGCACTGCTGATGAAGTGCATCAATGACCCCAATGCCATGTTCCTTACTGGAGACA
CGGCCCAAAGCATCATGAAGGGTGTGGCCTTCCGTTTCAGTGACCTGCTCTCTCTGTTCCACTA
CGCCAGCAGGAACACAGTAGACAAGCAATGTGCTGTTCGAAAGCCCAAGAGGATCCACCAGCTG
TACCAGAATTACAGATCTCACTCAGGGATCCTCAACCTTGCATCTGGAGTGGTGGACTTACTTC
AGTTCTATTTCCCAGAATCCTTTGATCGCCTTCCAAGAGATTCTGGACTTTTTGATGGTCCCAA
GCCAACTCTCTTGGACTCTTGTAGTGTAAGCGATTTGGCAATTTTGCTGCGAGGGAACAAAAGA
AAAACTCAGCCCATTGAATTTGGTGCCCACCAGGTGATTCTTGTTGCCAATGAAATGGCTAAGG
AGAAAATCCCAGAAGAGCTGGGGTTAGCTCTTGTGCTAACTGTTTATGAGGCCAAAGGACTGGA
ATTTGACGATGTCCTCCTTTACAACTTTTTCACTGATTCTGAGGCTTATAAGGAATGGAAGATC
ATATCCTCATTCATACCATCATCTGACTCCAGAGAGGAAAACTGCCCATTGCTTGATGTTCCCT
TGGAGAAGTCAAGTTCGTCCCAGGCTCGGTCCCTTATGGTGAACCCAGAAATGTACAAGCTCCT
CAATGGAGAGCTGAAGCAGCTATACACTGCCATCACGCGGGCTCGGGTCAACCTCTGGATCTTT
GACGAAAACCTAGAGAAACGGGCTCCTGCTTTCAAATATTTCATTAGGAGAGATTTTGTCCAAG
TTGTAAAGACAGATGAAAATAAAGACTTTGATGATAGCATGTTTGTTAAGACCTCAACCCCTGA
TGAGTGGATCATACAAGGAGACTATTATGCCAAGCACCAGTGCTGGAAGGTTGCAGCTAAATGT
TACCAGAAAGGAGATGCATTTGAGAAGGAGAAGTTGGCCCTGGCCCACTACACTGCCCTAAATA
TGAAATCCAAGAAATTCAGCCCCAAGGAGAAGGAGCTGCAGTATTTGGAACTGGCGAAGACTTA
CTTGGAGTGCAATGAACCAAAGCTATCTCTTAAGTGTTTGAGCTACGCCAAGGAGTTCCAGCTC
TCTGCCCAGTTGTGTGAGAGGCTGGGAAAGATAAGAGACGCTGCCTATTTCTATAAGCGAAGCC
AGTGCTTCAAAGATGCTTTCCGATGCTTTGAGCAGATTCAGGAGTTTGATCTCGCACTCAGAAT
GTACTGCCAAGAGGAGCTTTTTGAGGAAGCTGCTATTGCAGTGGAAAAATATGAAGAAATGTTA
AAGAACAAGACCTTTCCTGTTCCCAAGCTCTCCTACTCTGCCAGCCAGTTTTACTTGGAAGCTG
CTGCAAAGTACCTGAGTGCAAATAAAAGCAAGGAAATGATGGCCGTTCTTTCCAAGCTTGATGT
AGAAGACCAGCTGGTGTTCCTCAAGTCCCGGAAACGCCTCGCAGAAGCGGCAGAATTGCTCAAC
AGGGAGGGCCGGAAGGAAGAGGCTGCGCTATTGATGAAGCAACATGGCTGCCTCCTGGAGGCTG
CTAGGCTCACTGCCAACAAGGACTTCCAGGCCTCATGTCTCCTGGGGGTTGCCCGCCTCAACGT
GGCCAGGGATTCTGACGTAGAACATACAAAGGCTATTCTGCGAGAAGTGCTTGACCTCTGCTAT
CAAACCGGCCATCTGGCCGGCATCGCAGAGGCCCAGTTCCTGCAAGGGATTATCTTGAGAGACT
TTCAGAAGCTTAGAGATGCCTTCATCAAGTTTGACATGCTCAACCACTCAGCCGGAATGGTAGA
AGCTCTCTATGAAGCAGCCAGCCAGTGTGAGTCTGAGAGTCAGAAGGTTCTGGCCCTGGCTCCA
GGAGGCTTGGAAGTCCTTCTCAATCTGGTCAGGGCCCTTAAAAACGTGACCAACAATGCTGAAA
AGGAAATGGTCAAATCTTGCTTTGAGTTTTTTGGAATTTTTCAGGTGGATGCCAAGTATTGCCA
GATAGCCCAGAATGACCCTGGGCCCATATTAAGAATAATTTTAGACCTGGATTTGACCTTGAGT
GAGAAGAAAACAAAGGATCATTTTTTAGTACTAACTGATCAAGTGAAATTAGCCCTGAACAAAC
ACCTTTTGGGCAGACTGTGTCAGATCACACAGATCCTTCTCGGGAAGACCTACCCAGGGATCTG
CATGAGGTTTATTGTGGGTTTGAAATGTGAGGACGAGCACTGTGAAGATTTCCACAGGCCCCTC
AGGCGCTGTGAAGCCAAGTGCATGGTTCAGTCAAAAATGCACCTGGTTGCAATCAACGGTTTGC
TTCTGGAAGCCAAGAAAGTGTTCCCTAATGTCTTAGCTGAAGAACTTGAAGAAATAGATTATAT
TTTGTCTCCAGATACATATGGCCTTTGCAAATCCTTCCTCAACCTCCTCTTTCCTAGGCATTTC
CACCAGAGAGTGCTGTCGGAAAACCCCATGGCCTGCAAAGAAATCCTCAAGGCAAATTACAAGT
TCTTTCGCTCCTACCGGTTTGCCCTAAAAGAGTACATCCACGACCTGTTTCAAAAGGAAAGTGC
GCACAGCCGCAGGGAGTCCACAGACCTGTGGCTGAGTGCCATGCAGGCTTTCCTCCTGTCCTCC
AGCTACCCAGACGAGTTTGAGAAGCTGCTTCACCAGGAGGAAGACAGTTACAACCGGGAGCTGA
AAGTGCTTGAGTCTGACAGAGAGGACAGAGGCAGGGGTAGAGGCAGCAGGATGAAAGGCATAGA
AGGGAAGTTTGGCATGTTGGTGCCCAACAGGGAAGACGAGAATGTGGAGAGGTCCTACCTGTGC
TTCATCCGGCTGCTAGAGAGTTCCATGGACCAGCTCTATGTGCACAGGAACCCTGAAGACTACA
AGAGGCTCTTCTTCCGCTTCATGAATGTCCTCATCAAGAGGTGCAAAGCGCCGCTGGTCCCCAG
TATCATCAACACGGTGGTGCTGCTGGAGCTGCAGTTTGTCCACTGTGGGGCGGTGCTGGCCCGC
CTCTGGAAGAACGCTGTCCTGTGCCTCCCCAAGAGTTACATTGCACTCCTGCACTTCTGGGAGT
TTCTGTCCAGCAAGAAGGACAGGGAATCTGGGGATGTGTTCTCCATCATCCAAGAGTACAAGCC
AAAAGATGTGACCAGAGCCGTCCGGGACTTCCGGTTTCACCTGTCCTACCTCGTCAAGGTGCTG
TGTGGCTATGAGAATATGAACTTCAATGTCCTGCTTGACTCTTTCAGTGAAATAGACTATGTGA
TATCGGGAGAGGCAGAACGGACCCTGGTCTTGTGTTTGGTGATGCTGGTGAATGCTGAGGAAGT
CCTGCATCCCTTCTGCAAGCCACTTCTGTTCCGCCACTTCCGGGAGATCCAGAAGAGGCTGCAG
CTGATGAGCATGGACTGGCCAGGCCAGGTGCCCAAGAGGCTGCAGAAGGTGGTGCAGCGGGTGC
TGATGGCTGTCAGTGTGAAGTCTGTGGCTGAGGCACTGCAGGACCTGCTCTTTGAACGAGATGA
AGAGTACCTGGTGGACTGCCACTGGCGGTGGGACAGTGTGCATGCCAAAGGCACTGTGGTCCGT
GGCCTCTGTCATGAGGAGGTCAGGCTGAACCGCCTGCTCTGTACGGGCCCCATGGACCAGTTTG
CTGACTCGGACTGGGATTTTGGTGAAGATGAGACTCATGAATTAGATGAGCTGGCCCTGGAAGA
CCGAGATAATTTCCTGGCCGCCATCCTTTCCCAGAAGCAGCGAAAGGCCTTGATCCAGCGCAAG
CTGCGCACAGCCTGCCTAGTGGTGTCTCTGTGCATCAGCTGGAGGAGGTGGATCCAGACAGAGC
ACAGCAGGGAGGAGGATAGGGAGCTCAGGCCTGGGAACTTCAAAAGGGCCGATGTGGACAGGAC
CCAGTGCGACCTGTGTGGAGTGAAGTTTGCCCGCAGCCCCGAAAGCTATTTTAGTGCTGGCAAA
GCATTTGAGGGAGCAGCCACAGAGGCTGTGATCATTTCCAGGGCTGAACTGGAAGGGAGGGAAT
GCCGAGAGAGAGTCAGTGAGTCTTATGAGCAGCACATTCGCCTGGAAGGCCACCGAAGGCAGCA
AGCGGCCTACCAGAAATACCTGGATTTTTTCCATGAAAAGGTAGACCCGATCATTGAAGAAGGC
AAAGTGGTGGTGCAGGACGTTGAGCAGAGCGTCTGGATCCGGAGTCACCTGGGCTCCAAGGAGC
AGAGCCACATGCTGCAGAGGAAGGTGCAGGAGCACATCAGGAAGGTTTCAGATCTGGTGGAGGA
GCTCTACAGGCGGAAGGCCTGGGCTGAAGCAGAGGAAGTGATGACTCGGCAGGTCAAAATTCTG
ACCCTGTCAGTCAAGAACGCACAAGAGTGGCTGAAGAAGACAGAGCTCCGCTTAAAAGATGAAG
GTACTGTTCAGGACGAAGAGTATGAAAACGAAGTGGAAGACTTTGGTGAGCTCTGCCCTAGAAG
GCGTGCCCGGAAATGTGGAAAACAGAGAAAGTACTAA

hide sequence

RefSeq Acc Id:

XM_039081614 ⟹ XP_038937542

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	120,154,599 - 120,233,879 (+)	NCBI
mRatBN7.2	8	111,276,219 - 111,355,491 (+)	NCBI

RefSeq Acc Id:

XM_039081615 ⟹ XP_038937543

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	120,154,599 - 120,233,879 (+)	NCBI
mRatBN7.2	8	111,276,219 - 111,355,491 (+)	NCBI

RefSeq Acc Id:

XM_039081616 ⟹ XP_038937544

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	120,154,599 - 120,233,879 (+)	NCBI
mRatBN7.2	8	111,276,219 - 111,355,491 (+)	NCBI

RefSeq Acc Id:

XM_039081617 ⟹ XP_038937545

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	120,154,599 - 120,233,879 (+)	NCBI
mRatBN7.2	8	111,276,219 - 111,355,491 (+)	NCBI

RefSeq Acc Id:

XM_039081618 ⟹ XP_038937546

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	120,153,381 - 120,233,879 (+)	NCBI
mRatBN7.2	8	111,275,973 - 111,355,491 (+)	NCBI

RefSeq Acc Id:

XR_005487854

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	120,154,597 - 120,222,884 (+)	NCBI
mRatBN7.2	8	111,276,219 - 111,344,608 (+)	NCBI

RefSeq Acc Id:

XR_005487855

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	8	120,154,597 - 120,222,884 (+)	NCBI
mRatBN7.2	8	111,276,219 - 111,344,496 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001178728	(Get FASTA)	NCBI Sequence Viewer
	XP_038937542	(Get FASTA)	NCBI Sequence Viewer
	XP_038937543	(Get FASTA)	NCBI Sequence Viewer
	XP_038937544	(Get FASTA)	NCBI Sequence Viewer
	XP_038937545	(Get FASTA)	NCBI Sequence Viewer
	XP_038937546	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL77034	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000028633
	ENSRNOP00000028633.7
	ENSRNOP00000104428.1
	ENSRNOP00000110556
	ENSRNOP00000110556.1

RefSeq Acc Id:

NP_001178728 ⟸ NM_001191799

- UniProtKB:

D3ZSG2 (UniProtKB/TrEMBL), A6I3J3 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MASRTAGRRWPPRRRSSRRGPTPRSRAPGAKLSAPEAGPPRRGPLPRGGAGRDTLLGAKATPSS
PATRRYVTALGPPQPRGNTDSACAALPQPVPHEPREAAFRLVPGSERRASVSPARIPRRRRRVP
AMWDPRAARTPPRELAVLLCNKSNAFYSLGKWDEAFLAAKECLQWDPTYVKGYYRAGYSLLHLL
QPYEAARMFFEGLRLLQRSPDQVQVPDFLVGIFTTMSSDSIVLQSFLPCFDHIFSTGFSTEVWQ
SVIQKLAKKGLWHSFLLLSAKKDRLPSNIHVSELSLQSLFEKYVFIGLYEKMEQVPKLVQWLIS
IGANIETIGPSPLHALMRLCIQSRESQLFRWVMEYKPEWKEHINYRDDAGCTVLHVAAAHFPGY
TIKRQTEDVQMLLSFGADPTLLDGHARSAVDVLKRNRNFRAVDKINSHLEKLASSSKGRSEISA
GLDVNRDCATTFVKFLLERQKWPEVLLLLTRKASGQHQLRNGLIKDCDLSDLDICTVIPHLSAW
DQRKTQLLSRLIDSGALPEGLQDSQDRPLLMCLRHEDFDLAFLLLTKGADPRSVSLMEGDTPLH
AALHIFLDINADIGFNFLSHLLDLFLSNPTEFYYLNPNVQDSNGNTLMHLLFQKGMLKRTKKLI
ELLVKFDINFNLKNKAGKGVRHRIKKNDALLLAWNKALTESRRKNRQDPAAHLGRLSRSSALGH
TSQLKSQTSFKSLPCSTADRTLSKGVTEILPDVQVTRQEPEAMRTRSLRDRLVQDITVLIQQIE
LDMSLPQDYPQQGSPKMAAGMEGKKDKLQRTQSMGSSGSSRDNPVASEAGDGHAQAGPGALQLA
PVGNRLRVAGGNQDNWTMQEIQACLQDFDNMTWEIECTSEMLKKLSSKVMTKVIKKKIILAIQQ
LGNGEWTQGLQKRLKHSKGNIQLFEAKLDKGARMLWELAIDFSARCSENSEKIMGTERNTYSME
KSGRVYTEIIRIWDIVLDHCKLSDSIMAICSAYTRGLSCVLRKKLKGINKGQVSANMKIQKRIP
RCYVEDTEAEKSIEQADPEYFPPASAVETEYNIMKFHSFSTSMALNILNDMTATVEYPFRVGEL
EYAVIDLNPKPLEPIILIGRSGTGKTTCCLYRLWKKFHVYWEKAEQAGSPLLSKQILPKRRLEV
EPGKEGPGQEEEENEEEEGSIKVETVDSTEEEQESEACAGGTVESAGDSQAAEGCVPDHPHQLE
HLHQIFVTKNHVLCQEVQRNFIELSKSTKATSHYKPLDPNVHKLQDLRDENFPLFVTSKQLLLL
LDASLPKPFFLRNEDGSLKRTIVGWSTQEEFSIPSWEEDEDEVEADGNYSEEEKTTETQTGDSD
PRVYVTFEVFTNEIWPKMIKGRSSYNPALIWKEIKSFLKGSFEALSCPHGRLTEEAYQKLGRKR
SPNFKEDRSEIYSLFCLYQQIRSQKGYFDEEDVLYNLSWRLSKLRVLPWSIHELYGDEIQDFTQ
AELALLMKCINDPNAMFLTGDTAQSIMKGVAFRFSDLLSLFHYASRNTVDKQCAVRKPKRIHQL
YQNYRSHSGILNLASGVVDLLQFYFPESFDRLPRDSGLFDGPKPTLLDSCSVSDLAILLRGNKR
KTQPIEFGAHQVILVANEMAKEKIPEELGLALVLTVYEAKGLEFDDVLLYNFFTDSEAYKEWKI
ISSFIPSSDSREENCPLLDVPLEKSSSSQARSLMVNPEMYKLLNGELKQLYTAITRARVNLWIF
DENLEKRAPAFKYFIRRDFVQVVKTDENKDFDDSMFVKTSTPDEWIIQGDYYAKHQCWKVAAKC
YQKGDAFEKEKLALAHYTALNMKSKKFSPKEKELQYLELAKTYLECNEPKLSLKCLSYAKEFQL
SAQLCERLGKIRDAAYFYKRSQCFKDAFRCFEQIQEFDLALRMYCQEELFEEAAIAVEKYEEML
KNKTFPVPKLSYSASQFYLEAAAKYLSANKSKEMMAVLSKLDVEDQLVFLKSRKRLAEAAELLN
REGRKEEAALLMKQHGCLLEAARLTANKDFQASCLLGVARLNVARDSDVEHTKAILREVLDLCY
QTGHLAGIAEAQFLQGIILRDFQKLRDAFIKFDMLNHSAGMVEALYEAASQCESESQKVLALAP
GGLEVLLNLVRALKNVTNNAEKEMVKSCFEFFGIFQVDAKYCQIAQNDPGPILRIILDLDLTLS
EKKTKDHFLVLTDQVKLALNKHLLGRLCQITQILLGKTYPGICMRFIVGLKCEDEHCEDFHRPL
RRCEAKCMVQSKMHLVAINGLLLEAKKVFPNVLAEELEEIDYILSPDTYGLCKSFLNLLFPRHF
HQRVLSENPMACKEILKANYKFFRSYRFALKEYIHDLFQKESAHSRRESTDLWLSAMQAFLLSS
SYPDEFEKLLHQEEDSYNRELKVLESDREDRGRGRGSRMKGIEGKFGMLVPNREDENVERSYLC
FIRLLESSMDQLYVHRNPEDYKRLFFRFMNVLIKRCKAPLVPSIINTVVLLELQFVHCGAVLAR
LWKNAVLCLPKSYIALLHFWEFLSSKKDRESGDVFSIIQEYKPKDVTRAVRDFRFHLSYLVKVL
CGYENMNFNVLLDSFSEIDYVISGEAERTLVLCLVMLVNAEEVLHPFCKPLLFRHFREIQKRLQ
LMSMDWPGQVPKRLQKVVQRVLMAVSVKSVAEALQDLLFERDEEYLVDCHWRWDSVHAKGTVVR
GLCHEEVRLNRLLCTGPMDQFADSDWDFGEDETHELDELALEDRDNFLAAILSQKQRKALIQRK
LRTACLVVSLCISWRRWIQTEHSREEDRELRPGNFKRADVDRTQCDLCGVKFARSPESYFSAGK
AFEGAATEAVIISRAELEGRECRERVSESYEQHIRLEGHRRQQAAYQKYLDFFHEKVDPIIEEG
KVVVQDVEQSVWIRSHLGSKEQSHMLQRKVQEHIRKVSDLVEELYRRKAWAEAEEVMTRQVKIL
TLSVKNAQEWLKKTELRLKDEGTVQDEEYENEVEDFGELCPRRRARKCGKQRKY

hide sequence

Ensembl Acc Id:

ENSRNOP00000028633 ⟸ ENSRNOT00000028633

RefSeq Acc Id:	XP_038937546 ⟸ XM_039081618
- Peptide Label:	isoform X5
- UniProtKB:	A6I3J3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038937542 ⟸ XM_039081614
- Peptide Label:	isoform X1
- UniProtKB:	A6I3J3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038937545 ⟸ XM_039081617
- Peptide Label:	isoform X4
- UniProtKB:	A6I3J3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038937543 ⟸ XM_039081615
- Peptide Label:	isoform X2
- UniProtKB:	A6I3J3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038937544 ⟸ XM_039081616
- Peptide Label:	isoform X3
- UniProtKB:	A6I3J3 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000110556 ⟸ ENSRNOT00000165486

Ensembl Acc Id:

ENSRNOP00000104428 ⟸ ENSRNOT00000122532

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1563130	AgrOrtholog
BioCyc Gene	G2FUF-29021	BioCyc
Ensembl Genes	ENSRNOG00000021091	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000028633	ENTREZGENE
	ENSRNOT00000028633.7	UniProtKB/TrEMBL
	ENSRNOT00000122532.1	UniProtKB/TrEMBL
	ENSRNOT00000165486	ENTREZGENE
	ENSRNOT00000165486.1	UniProtKB/TrEMBL
Gene3D-CATH	1.25.40.10	UniProtKB/TrEMBL
	1.25.40.20	UniProtKB/TrEMBL
	3.40.50.300	UniProtKB/TrEMBL
InterPro	Ankyrin_rpt	UniProtKB/TrEMBL
	Ankyrin_rpt-contain_sf	UniProtKB/TrEMBL
	P-loop_NTPase	UniProtKB/TrEMBL
	TPR-like_helical	UniProtKB/TrEMBL
	TRANK1	UniProtKB/TrEMBL
KEGG Report	rno:316022	UniProtKB/TrEMBL
NCBI Gene	316022	ENTREZGENE
PANTHER	PTHR21529	UniProtKB/TrEMBL
	TPR AND ANKYRIN REPEAT-CONTAINING PROTEIN 1	UniProtKB/TrEMBL
PhenoGen	Trank1	PhenoGen
PROSITE	ANK_REPEAT	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000021091	RatGTEx
SMART	ANK	UniProtKB/TrEMBL
Superfamily-SCOP	ANK	UniProtKB/TrEMBL
	SSF48452	UniProtKB/TrEMBL
	SSF52540	UniProtKB/TrEMBL
UniProt	A0ABK0LI25_RAT	UniProtKB/TrEMBL
	A0ABK0LUU5_RAT	UniProtKB/TrEMBL
	A6I3J3	ENTREZGENE, UniProtKB/TrEMBL
	D3ZSG2	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2010-05-05	Trank1	tetratricopeptide repeat and ankyrin repeat containing 1	RGD1563130	similar to KIAA0342 protein	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-04-30	RGD1563130	similar to KIAA0342 protein	RGD1563130_predicted	similar to KIAA0342 protein (predicted)	'predicted' is removed	2292626	APPROVED
2006-03-07	RGD1563130_predicted	similar to KIAA0342 protein (predicted)	LOC316022	similar to KIAA0342 protein	Symbol and Name status set to approved	1299863	APPROVED
2006-02-09	LOC316022	similar to KIAA0342 protein			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD