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Imported Disease Annotations - CTDTerm | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | bipolar disorder | | ISO | RGD:2937319 | 11554173 | CTD Direct Evidence: marker/mechanism | CTD | PMID:31043756 | |
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Imported Disease Annotations - CTDTerm | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | bipolar disorder | | ISO | RGD:2937319 | 11554173 | CTD Direct Evidence: marker/mechanism | CTD | PMID:31043756 | |
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1. | RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations |
2. | RGD automated import pipeline for gene-chemical interactions |
PMID:9585807 | PMID:10349636 | PMID:11042159 | PMID:11076861 | PMID:11217851 | PMID:12466851 | PMID:12477932 | PMID:14621295 | PMID:16141072 | PMID:16141073 | PMID:18287559 | PMID:21267068 |
PMID:25855264 | PMID:32325033 |
Trank1 (Mus musculus - house mouse) |
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TRANK1 (Homo sapiens - human) |
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Trank1 (Rattus norvegicus - Norway rat) |
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Trank1 (Chinchilla lanigera - long-tailed chinchilla) |
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TRANK1 (Pan paniscus - bonobo/pygmy chimpanzee) |
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TRANK1 (Canis lupus familiaris - dog) |
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Trank1 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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TRANK1 (Sus scrofa - pig) |
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TRANK1 (Chlorocebus sabaeus - African green monkey) |
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Trank1 (Heterocephalus glaber - naked mole-rat) |
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D9Mit350 |
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D9Dcr119 |
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The following QTLs overlap with this region. | ![]() | Full Report | ![]() | CSV | ![]() | TAB | ![]() | Printer | ![]() | Gviewer |
The detailed report is available here: | ![]() | Full Report | ![]() | CSV | ![]() | TAB | ![]() | Printer |
miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/). For more information about miRGate, see PMID:25858286 or access the full paper here. |
RefSeq Acc Id: | ENSMUST00000078626 ⟹ ENSMUSP00000077697 | ||||||||
RefSeq Status: | |||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENSMUST00000196945 | ||||||||
RefSeq Status: | |||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENSMUST00000197049 ⟹ ENSMUSP00000143534 | ||||||||
RefSeq Status: | |||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENSMUST00000197650 | ||||||||
RefSeq Status: | |||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENSMUST00000198890 | ||||||||
RefSeq Status: | |||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENSMUST00000200151 | ||||||||
RefSeq Status: | |||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENSMUST00000200272 | ||||||||
RefSeq Status: | |||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | NM_001164659 ⟹ NP_001158131 | ||||||||||||||||||||||||
RefSeq Status: | VALIDATED | ||||||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_006512160 ⟹ XP_006512223 | ||||||||||||
RefSeq Status: | |||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_006512161 ⟹ XP_006512224 | ||||||||||||
RefSeq Status: | |||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_006512162 ⟹ XP_006512225 | ||||||||||||
RefSeq Status: | |||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_006512163 ⟹ XP_006512226 | ||||||||||||
RefSeq Status: | |||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_006512164 ⟹ XP_006512227 | ||||||||||||
RefSeq Status: | |||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_017313432 ⟹ XP_017168921 | ||||||||||||
RefSeq Status: | |||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XR_003947933 | ||||||||||||
RefSeq Status: | |||||||||||||
Type: | NON-CODING | ||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XR_004935454 | ||||||||
RefSeq Status: | |||||||||
Type: | NON-CODING | ||||||||
Position: |
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RefSeq Acc Id: | XR_379871 | ||||||||||||
RefSeq Status: | |||||||||||||
Type: | NON-CODING | ||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XR_379872 | ||||||||||||
RefSeq Status: | |||||||||||||
Type: | NON-CODING | ||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | NP_001158131 ⟸ NM_001164659 |
- UniProtKB: | Q8BV79 (UniProtKB/Swiss-Prot) |
- Sequence: |
RefSeq Acc Id: | XP_006512226 ⟸ XM_006512163 |
- Peptide Label: | isoform X5 |
- Sequence: |
RefSeq Acc Id: | XP_006512223 ⟸ XM_006512160 |
- Peptide Label: | isoform X1 |
- Sequence: |
RefSeq Acc Id: | XP_006512224 ⟸ XM_006512161 |
- Peptide Label: | isoform X2 |
- Sequence: |
RefSeq Acc Id: | XP_006512225 ⟸ XM_006512162 |
- Peptide Label: | isoform X4 |
- Sequence: |
RefSeq Acc Id: | XP_006512227 ⟸ XM_006512164 |
- Peptide Label: | isoform X6 |
- Sequence: |
RefSeq Acc Id: | XP_017168921 ⟸ XM_017313432 |
- Peptide Label: | isoform X3 |
- Sequence: |
RefSeq Acc Id: | ENSMUSP00000143534 ⟸ ENSMUST00000197049 |
RefSeq Acc Id: | ENSMUSP00000077697 ⟸ ENSMUST00000078626 |
RGD ID: | 8671060 | ||||||||
Promoter ID: | EPDNEW_M13561 | ||||||||
Type: | multiple initiation site | ||||||||
Name: | Trank1_1 | ||||||||
Description: | Mus musculus tetratricopeptide repeat and ankyrin repeat containing1 , mRNA. | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/) | ||||||||
Experiment Methods: | Single-end sequencing. | ||||||||
Position: |
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Database | Acc Id | Source(s) |
AGR Gene | MGI:1341834 | AgrOrtholog |
Ensembl Genes | ENSMUSG00000062296 | Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
Ensembl Protein | ENSMUSP00000077697 | ENTREZGENE, UniProtKB/Swiss-Prot |
ENSMUSP00000143534 | UniProtKB/TrEMBL | |
Ensembl Transcript | ENSMUST00000078626 | ENTREZGENE, UniProtKB/Swiss-Prot |
ENSMUST00000197049 | UniProtKB/TrEMBL | |
Gene3D-CATH | 1.25.40.10 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
1.25.40.20 | UniProtKB/Swiss-Prot | |
InterPro | Ankyrin_rpt | UniProtKB/Swiss-Prot |
Ankyrin_rpt-contain_dom | UniProtKB/Swiss-Prot | |
Ankyrin_rpt-contain_sf | UniProtKB/Swiss-Prot | |
P-loop_NTPase | UniProtKB/Swiss-Prot | |
TPR-contain_dom | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
TPR-like_helical_dom_sf | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
TRANK1 | UniProtKB/Swiss-Prot | |
KEGG Report | mmu:320429 | UniProtKB/Swiss-Prot |
MGD | MGI:1341834 | ENTREZGENE |
NCBI Gene | 320429 | ENTREZGENE |
PANTHER | PTHR21529 | UniProtKB/Swiss-Prot |
PhenoGen | Trank1 | PhenoGen |
PROSITE | ANK_REP_REGION | UniProtKB/Swiss-Prot |
TPR_REGION | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
SMART | ANK | UniProtKB/Swiss-Prot |
Superfamily-SCOP | SSF48403 | UniProtKB/Swiss-Prot |
SSF48452 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
SSF52540 | UniProtKB/Swiss-Prot | |
UniGene | Mm.270754 | ENTREZGENE |
UniProt | A0A0G2JGE4_MOUSE | UniProtKB/TrEMBL |
Q8BV79 | ENTREZGENE | |
Q9D1V3_MOUSE | UniProtKB/TrEMBL | |
TRNK1_MOUSE | UniProtKB/Swiss-Prot | |
UniProt Secondary | Q5RJH5 | UniProtKB/Swiss-Prot |
Q6ZQD5 | UniProtKB/Swiss-Prot |